RNA–Protein interactions for RNA: ENST00000441135.1

SMPD4-210, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 4

Gene SMPD4, Length 699 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-210ENST00000441135 HSD17B7P56937 341 aa17.09■□□□□ 0.33
SMPD4-210ENST00000441135 ZNF33BQ06732 778 aa17.09■□□□□ 0.33
SMPD4-210ENST00000441135 LCP2Q13094 533 aa17.09■□□□□ 0.33
SMPD4-210ENST00000441135 IFT88Q13099 833 aa17.09■□□□□ 0.33
SMPD4-210ENST00000441135 DDX39BQ13838 428 aaKnown RBP17.09■□□□□ 0.33
SMPD4-210ENST00000441135 ABRAXAS2Q15018 415 aa17.09■□□□□ 0.33
SMPD4-210ENST00000441135 NSDHLQ15738 373 aa17.09■□□□□ 0.33
SMPD4-210ENST00000441135 INAQ16352 499 aa17.09■□□□□ 0.33
SMPD4-210ENST00000441135 EXT1Q16394 746 aa17.09■□□□□ 0.33
SMPD4-210ENST00000441135 EIF2S3LQ2VIR3 472 aaKnown RBP17.09■□□□□ 0.33
SMPD4-210ENST00000441135 AP5B1Q2VPB7 878 aa17.09■□□□□ 0.33
SMPD4-210ENST00000441135 ABHD17BQ5VST6 288 aa17.09■□□□□ 0.33
SMPD4-210ENST00000441135 RPUSD3Q6P087 351 aaKnown RBP17.09■□□□□ 0.33
SMPD4-210ENST00000441135 LETMD1Q6P1Q0 360 aa17.09■□□□□ 0.33
SMPD4-210ENST00000441135 LANCL3Q6ZV70 420 aa17.09■□□□□ 0.33
SMPD4-210ENST00000441135 ZNF595Q8IYB9 648 aa17.09■□□□□ 0.33
SMPD4-210ENST00000441135 C4orf33Q8N1A6 199 aa17.09■□□□□ 0.33
SMPD4-210ENST00000441135 ACOT4Q8N9L9 421 aa17.09■□□□□ 0.33
SMPD4-210ENST00000441135 BANPQ8N9N5 519 aa17.09■□□□□ 0.33
SMPD4-210ENST00000441135 ARMC2Q8NEN0 867 aa17.09■□□□□ 0.33
SMPD4-210ENST00000441135 PRR7Q8TB68 274 aa17.09■□□□□ 0.33
SMPD4-210ENST00000441135 HAS2Q92819 552 aa17.09■□□□□ 0.33
SMPD4-210ENST00000441135 CDK15Q96Q40 435 aa17.09■□□□□ 0.33
SMPD4-210ENST00000441135 MTERF1Q99551 399 aaKnown RBP17.09■□□□□ 0.33
SMPD4-210ENST00000441135 SERPINI1Q99574 410 aa17.09■□□□□ 0.33
SMPD4-210ENST00000441135 SNX6Q9UNH7 406 aa17.09■□□□□ 0.33
SMPD4-210ENST00000441135 ESPL1Q14674 2120 aa17.08■□□□□ 0.33
SMPD4-210ENST00000441135 A0A0G2JN53 185 aa17.08■□□□□ 0.32
SMPD4-210ENST00000441135 CCDC151A5D8V7 595 aa17.08■□□□□ 0.32
SMPD4-210ENST00000441135 CLDN4O14493 209 aa17.08■□□□□ 0.32
SMPD4-210ENST00000441135 PRMT3O60678 531 aa17.08■□□□□ 0.32
SMPD4-210ENST00000441135 SEMA7AO75326 666 aa17.08■□□□□ 0.32
SMPD4-210ENST00000441135 ERLIN1O75477 346 aa17.08■□□□□ 0.32
SMPD4-210ENST00000441135 CERS1P27544 350 aa17.08■□□□□ 0.32
SMPD4-210ENST00000441135 SSR2P43308 183 aa17.08■□□□□ 0.32
SMPD4-210ENST00000441135 TNFSF10P50591 281 aa17.08■□□□□ 0.32
SMPD4-210ENST00000441135 RAP1GDS1P52306 607 aa17.08■□□□□ 0.32
SMPD4-210ENST00000441135 CDH13P55290 713 aa17.08■□□□□ 0.32
SMPD4-210ENST00000441135 LIM2P55344 173 aa17.08■□□□□ 0.32
SMPD4-210ENST00000441135 RPS13P62277 151 aaKnown RBP17.08■□□□□ 0.32
SMPD4-210ENST00000441135 ZNF844Q08AG5 666 aa17.08■□□□□ 0.32
SMPD4-210ENST00000441135 BTBD16Q32M84 506 aa17.08■□□□□ 0.32
SMPD4-210ENST00000441135 OR4C11Q6IEV9 310 aa17.08■□□□□ 0.32
SMPD4-210ENST00000441135 FAM180AQ6UWF9 173 aa17.08■□□□□ 0.32
SMPD4-210ENST00000441135 ZNF793Q6ZN11 406 aa17.08■□□□□ 0.32
SMPD4-210ENST00000441135 GPRIN3Q6ZVF9 776 aa17.08■□□□□ 0.32
SMPD4-210ENST00000441135 SCUBE1Q8IWY4 988 aa17.08■□□□□ 0.32
SMPD4-210ENST00000441135 SHISA5Q8N114 240 aa17.08■□□□□ 0.32
SMPD4-210ENST00000441135 ST6GALNAC3Q8NDV1 305 aa17.08■□□□□ 0.32
SMPD4-210ENST00000441135 GRHL3Q8TE85 626 aa17.08■□□□□ 0.32
SMPD4-210ENST00000441135 TRPC4APQ8TEL6 797 aa17.08■□□□□ 0.32
SMPD4-210ENST00000441135 RBCK1Q9BYM8 510 aa17.08■□□□□ 0.32
SMPD4-210ENST00000441135 IQCGQ9H095 443 aaKnown RBP17.08■□□□□ 0.32
SMPD4-210ENST00000441135 OR51B5Q9H339 312 aa17.08■□□□□ 0.32
SMPD4-210ENST00000441135 ELOVL6Q9H5J4 265 aa17.08■□□□□ 0.32
SMPD4-210ENST00000441135 BRF2Q9HAW0 419 aa17.08■□□□□ 0.32
SMPD4-210ENST00000441135 MS4A12Q9NXJ0 267 aa17.08■□□□□ 0.32
SMPD4-210ENST00000441135 KCMF1Q9P0J7 381 aa17.08■□□□□ 0.32
SMPD4-210ENST00000441135 ZNF225Q9UK10 706 aa17.08■□□□□ 0.32
SMPD4-210ENST00000441135 PLLPQ9Y342 182 aa17.08■□□□□ 0.32
SMPD4-210ENST00000441135 SPACA6W5XKT8 324 aa17.08■□□□□ 0.32
SMPD4-210ENST00000441135 CNTRLQ7Z7A1 2325 aa17.07■□□□□ 0.32
SMPD4-210ENST00000441135 IGHV3-20A0A0C4DH32 117 aa17.07■□□□□ 0.32
SMPD4-210ENST00000441135 TCRBV16S1A1N1A0A5B0 115 aa17.07■□□□□ 0.32
SMPD4-210ENST00000441135 CYR61O00622 381 aa17.07■□□□□ 0.32
SMPD4-210ENST00000441135 PLPP1O14494 284 aa17.07■□□□□ 0.32
SMPD4-210ENST00000441135 CDC123O75794 336 aaPredicted RBP17.07■□□□□ 0.32
SMPD4-210ENST00000441135 DDAH2O95865 285 aa17.07■□□□□ 0.32
SMPD4-210ENST00000441135 ENO1P06733 434 aaKnown RBP17.07■□□□□ 0.32
SMPD4-210ENST00000441135 HSD3B1P14060 373 aa17.07■□□□□ 0.32
SMPD4-210ENST00000441135 CPA3P15088 417 aa17.07■□□□□ 0.32
SMPD4-210ENST00000441135 HSD3B2P26439 372 aa17.07■□□□□ 0.32
SMPD4-210ENST00000441135 TERF2Q15554 542 aa17.07■□□□□ 0.32
SMPD4-210ENST00000441135 TTC19Q6DKK2 380 aaPredicted RBP17.07■□□□□ 0.32
SMPD4-210ENST00000441135 HOMEZQ8IX15 550 aa17.07■□□□□ 0.32
SMPD4-210ENST00000441135 SRRM1Q8IYB3 904 aaKnown RBP17.07■□□□□ 0.32
SMPD4-210ENST00000441135 BCORP1Q8N888 145 aa17.07■□□□□ 0.32
SMPD4-210ENST00000441135 CATSPER1Q8NEC5 780 aa17.07■□□□□ 0.32
SMPD4-210ENST00000441135 OR1N1Q8NGS0 311 aa17.07■□□□□ 0.32
SMPD4-210ENST00000441135 FAR1Q8WVX9 515 aa17.07■□□□□ 0.32
SMPD4-210ENST00000441135 TSLPQ969D9 159 aa17.07■□□□□ 0.32
SMPD4-210ENST00000441135 PTCHD1Q96NR3 888 aa17.07■□□□□ 0.32
SMPD4-210ENST00000441135 LPAR4Q99677 370 aa17.07■□□□□ 0.32
SMPD4-210ENST00000441135 ZNF717Q9BY31 904 aaPredicted RBP17.07■□□□□ 0.32
SMPD4-210ENST00000441135 GSTO2Q9H4Y5 243 aa17.07■□□□□ 0.32
SMPD4-210ENST00000441135 DDX31Q9H8H2 851 aaKnown RBP17.07■□□□□ 0.32
SMPD4-210ENST00000441135 OXSMQ9NWU1 459 aa17.07■□□□□ 0.32
SMPD4-210ENST00000441135 ADAM29Q9UKF5 820 aa17.07■□□□□ 0.32
SMPD4-210ENST00000441135 SCN2AQ99250 2005 aa17.06■□□□□ 0.32
SMPD4-210ENST00000441135 A0A1B0GTL3 188 aa17.06■□□□□ 0.32
SMPD4-210ENST00000441135 PPP6CO00743 305 aa17.06■□□□□ 0.32
SMPD4-210ENST00000441135 B4GALT2O60909 372 aa17.06■□□□□ 0.32
SMPD4-210ENST00000441135 ESRRBO95718 433 aa17.06■□□□□ 0.32
SMPD4-210ENST00000441135 KRT6AP02538 564 aa17.06■□□□□ 0.32
SMPD4-210ENST00000441135 KRT6BP04259 564 aa17.06■□□□□ 0.32
SMPD4-210ENST00000441135 EDN3P14138 238 aa17.06■□□□□ 0.32
SMPD4-210ENST00000441135 KRT6CP48668 564 aa17.06■□□□□ 0.32
SMPD4-210ENST00000441135 ACTN3Q08043 901 aaPredicted RBP17.06■□□□□ 0.32
SMPD4-210ENST00000441135 KRT71Q3SY84 523 aa17.06■□□□□ 0.32
SMPD4-210ENST00000441135 SFT2D3Q587I9 215 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms