RNA–Protein interactions for RNA: ENST00000439453.5

HPS4-206, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 3,936 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-206ENST00000439453 CPSF4O95639 269 aaKnown RBP8.19□□□□□ -1.1
HPS4-206ENST00000439453 SCG5P05408 212 aa8.19□□□□□ -1.1
HPS4-206ENST00000439453 EPB42P16452 691 aa8.19□□□□□ -1.1
HPS4-206ENST00000439453 POLR2CP19387 275 aaPredicted RBP8.19□□□□□ -1.1
HPS4-206ENST00000439453 CPN2P22792 545 aa8.19□□□□□ -1.1
HPS4-206ENST00000439453 SOX3P41225 446 aa8.19□□□□□ -1.1
HPS4-206ENST00000439453 CRYBA2P53672 197 aa8.19□□□□□ -1.1
HPS4-206ENST00000439453 EFEMP1Q12805 493 aa8.19□□□□□ -1.1
HPS4-206ENST00000439453 ABRQ12979 859 aa8.19□□□□□ -1.1
HPS4-206ENST00000439453 VEPH1Q14D04 833 aa8.19□□□□□ -1.1
HPS4-206ENST00000439453 LARS2Q15031 903 aaKnown RBP8.19□□□□□ -1.1
HPS4-206ENST00000439453 GPR19Q15760 415 aa8.19□□□□□ -1.1
HPS4-206ENST00000439453 FAM78AQ5JUQ0 283 aa8.19□□□□□ -1.1
HPS4-206ENST00000439453 IER5LQ5T953 404 aa8.19□□□□□ -1.1
HPS4-206ENST00000439453 AMIGO1Q86WK6 493 aa8.19□□□□□ -1.1
HPS4-206ENST00000439453 ZNF557Q8N988 423 aaPredicted RBP8.19□□□□□ -1.1
HPS4-206ENST00000439453 OR52J3Q8NH60 311 aa8.19□□□□□ -1.1
HPS4-206ENST00000439453 SPPL2AQ8TCT8 520 aa8.19□□□□□ -1.1
HPS4-206ENST00000439453 BTN2A2Q8WVV5 523 aa8.19□□□□□ -1.1
HPS4-206ENST00000439453 EXOC2Q96KP1 924 aa8.19□□□□□ -1.1
HPS4-206ENST00000439453 TLR8Q9NR97 1041 aaKnown RBP8.19□□□□□ -1.1
HPS4-206ENST00000439453 FABP12A6NFH5 140 aa8.19□□□□□ -1.1
HPS4-206ENST00000439453 ADAMDEC1O15204 470 aa8.19□□□□□ -1.1
HPS4-206ENST00000439453 PLA2G10O15496 165 aa8.19□□□□□ -1.1
HPS4-206ENST00000439453 TMCC2O75069 709 aa8.19□□□□□ -1.1
HPS4-206ENST00000439453 CLDN9O95484 217 aa8.19□□□□□ -1.1
HPS4-206ENST00000439453 PRAMEF12O95522 483 aa8.19□□□□□ -1.1
HPS4-206ENST00000439453 OLFM2O95897 454 aa8.19□□□□□ -1.1
HPS4-206ENST00000439453 ALAS2P22557 587 aa8.19□□□□□ -1.1
HPS4-206ENST00000439453 AQP1P29972 269 aa8.19□□□□□ -1.1
HPS4-206ENST00000439453 PCDH1Q08174 1060 aa8.19□□□□□ -1.1
HPS4-206ENST00000439453 FOXD4Q12950 439 aaPredicted RBP8.19□□□□□ -1.1
HPS4-206ENST00000439453 PTPRRQ15256 657 aa8.19□□□□□ -1.1
HPS4-206ENST00000439453 PTRHD1Q6GMV3 140 aaKnown RBP8.19□□□□□ -1.1
HPS4-206ENST00000439453 GDPGP1Q6ZNW5 385 aa8.19□□□□□ -1.1
HPS4-206ENST00000439453 GPR155Q7Z3F1 870 aa8.19□□□□□ -1.1
HPS4-206ENST00000439453 FAM217AQ8IXS0 508 aa8.19□□□□□ -1.1
HPS4-206ENST00000439453 LGI4Q8N135 537 aa8.19□□□□□ -1.1
HPS4-206ENST00000439453 STK40Q8N2I9 435 aa8.19□□□□□ -1.1
HPS4-206ENST00000439453 GDPD1Q8N9F7 314 aa8.19□□□□□ -1.1
HPS4-206ENST00000439453 NLGN4YQ8NFZ3 816 aaPredicted RBP8.19□□□□□ -1.1
HPS4-206ENST00000439453 SELENOMQ8WWX9 145 aa8.19□□□□□ -1.1
HPS4-206ENST00000439453 NACC2Q96BF6 587 aa8.19□□□□□ -1.1
HPS4-206ENST00000439453 MYEOVQ96EZ4 313 aa8.19□□□□□ -1.1
HPS4-206ENST00000439453 TRMT61AQ96FX7 289 aaKnown RBP8.19□□□□□ -1.1
HPS4-206ENST00000439453 HHIPQ96QV1 700 aa8.19□□□□□ -1.1
HPS4-206ENST00000439453 DOHHQ9BU89 302 aa8.19□□□□□ -1.1
HPS4-206ENST00000439453 SLC46A2Q9BY10 475 aa8.19□□□□□ -1.1
HPS4-206ENST00000439453 MIXL1Q9H2W2 232 aa8.19□□□□□ -1.1
HPS4-206ENST00000439453 ZNF556Q9HAH1 456 aa8.19□□□□□ -1.1
HPS4-206ENST00000439453 NDUFAF4Q9P032 175 aa8.19□□□□□ -1.1
HPS4-206ENST00000439453 MAPRE3Q9UPY8 281 aa8.19□□□□□ -1.1
HPS4-206ENST00000439453 SH3D21A4FU49 640 aa8.19□□□□□ -1.1
HPS4-206ENST00000439453 FADS2P1A8MWK0 482 aa8.19□□□□□ -1.1
HPS4-206ENST00000439453 ZNF670-ZNF695F2Z2N8 137 aa8.19□□□□□ -1.1
HPS4-206ENST00000439453 NARSO43776 548 aaKnown RBP8.19□□□□□ -1.1
HPS4-206ENST00000439453 TRIM3O75382 744 aaPredicted RBP8.19□□□□□ -1.1
HPS4-206ENST00000439453 PDE9AO76083 593 aa8.19□□□□□ -1.1
HPS4-206ENST00000439453 CYP17A1P05093 508 aa8.19□□□□□ -1.1
HPS4-206ENST00000439453 NUDT7P0C024 238 aa8.19□□□□□ -1.1
HPS4-206ENST00000439453 CHMP24386 653 aa8.19□□□□□ -1.1
HPS4-206ENST00000439453 MAPK1P28482 360 aa8.19□□□□□ -1.1
HPS4-206ENST00000439453 WEE1P30291 646 aa8.19□□□□□ -1.1
HPS4-206ENST00000439453 CRYBB2P43320 205 aa8.19□□□□□ -1.1
HPS4-206ENST00000439453 ALDH9A1P49189 494 aa8.19□□□□□ -1.1
HPS4-206ENST00000439453 INPP1P49441 399 aa8.19□□□□□ -1.1
HPS4-206ENST00000439453 RGS4P49798 205 aa8.19□□□□□ -1.1
HPS4-206ENST00000439453 TATDN3Q17R31 274 aa8.19□□□□□ -1.1
HPS4-206ENST00000439453 LAMTOR1Q6IAA8 161 aa8.19□□□□□ -1.1
HPS4-206ENST00000439453 SDE2Q6IQ49 451 aa8.19□□□□□ -1.1
HPS4-206ENST00000439453 SLC51BQ86UW2 128 aa8.19□□□□□ -1.1
HPS4-206ENST00000439453 OR4C15Q8NGM1 316 aa8.19□□□□□ -1.1
HPS4-206ENST00000439453 UBTD2Q8WUN7 234 aa8.19□□□□□ -1.1
HPS4-206ENST00000439453 ASIC4Q96FT7 647 aa8.19□□□□□ -1.1
HPS4-206ENST00000439453 DIRAS2Q96HU8 199 aa8.19□□□□□ -1.1
HPS4-206ENST00000439453 CIPCQ9C0C6 399 aa8.19□□□□□ -1.1
HPS4-206ENST00000439453 C12orf10Q9HB07 376 aa8.19□□□□□ -1.1
HPS4-206ENST00000439453 KCNK12Q9HB15 430 aa8.19□□□□□ -1.1
HPS4-206ENST00000439453 CLN6Q9NWW5 311 aa8.19□□□□□ -1.1
HPS4-206ENST00000439453 SEC14L4Q9UDX3 406 aa8.19□□□□□ -1.1
HPS4-206ENST00000439453 ALG5Q9Y673 324 aa8.19□□□□□ -1.1
HPS4-206ENST00000439453 A0A0D9SEW6 157 aa8.18□□□□□ -1.1
HPS4-206ENST00000439453 TEX51A0A1B0GUA7 166 aa8.18□□□□□ -1.1
HPS4-206ENST00000439453 C2orf78A6NCI8 922 aa8.18□□□□□ -1.1
HPS4-206ENST00000439453 TMEM229AB2RXF0 380 aa8.18□□□□□ -1.1
HPS4-206ENST00000439453 INSIG1O15503 277 aa8.18□□□□□ -1.1
HPS4-206ENST00000439453 CCNB2O95067 398 aa8.18□□□□□ -1.1
HPS4-206ENST00000439453 HMBSP08397 361 aa8.18□□□□□ -1.1
HPS4-206ENST00000439453 PSKH1P11801 424 aa8.18□□□□□ -1.1
HPS4-206ENST00000439453 ZNF30P17039 623 aa8.18□□□□□ -1.1
HPS4-206ENST00000439453 CTPS1P17812 591 aa8.18□□□□□ -1.1
HPS4-206ENST00000439453 PSMA1P25786 263 aaKnown RBP8.18□□□□□ -1.1
HPS4-206ENST00000439453 GABRR2P28476 465 aa8.18□□□□□ -1.1
HPS4-206ENST00000439453 GPC1P35052 558 aa8.18□□□□□ -1.1
HPS4-206ENST00000439453 CDH12P55289 794 aa8.18□□□□□ -1.1
HPS4-206ENST00000439453 CDC42P60953 191 aa8.18□□□□□ -1.1
HPS4-206ENST00000439453 SPIBQ01892 262 aa8.18□□□□□ -1.1
HPS4-206ENST00000439453 RHAGQ02094 409 aa8.18□□□□□ -1.1
HPS4-206ENST00000439453 MTAPQ13126 283 aa8.18□□□□□ -1.1
HPS4-206ENST00000439453 MICAQ29983 383 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms