RNA–Protein interactions for RNA: ENST00000438647.3

RAPGEF1-206, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene RAPGEF1, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-206ENST00000438647 FBXW2Q9UKT8 454 aa23.14■■□□□ 1.29
RAPGEF1-206ENST00000438647 SHANK1Q9Y566 2161 aa23.14■■□□□ 1.29
RAPGEF1-206ENST00000438647 GLRA3O75311 464 aa23.13■■□□□ 1.29
RAPGEF1-206ENST00000438647 SEMA3DO95025 777 aa23.13■■□□□ 1.29
RAPGEF1-206ENST00000438647 SLU7O95391 586 aaKnown RBP23.13■■□□□ 1.29
RAPGEF1-206ENST00000438647 ZIC2O95409 532 aaPredicted RBP23.13■■□□□ 1.29
RAPGEF1-206ENST00000438647 ELAVL1Q15717 326 aaKnown RBP23.13■■□□□ 1.29
RAPGEF1-206ENST00000438647 FCRLBQ6BAA4 426 aa23.13■■□□□ 1.29
RAPGEF1-206ENST00000438647 CLNKQ7Z7G1 428 aa23.13■■□□□ 1.29
RAPGEF1-206ENST00000438647 BEST3Q8N1M1 668 aa23.13■■□□□ 1.29
RAPGEF1-206ENST00000438647 NFAM1Q8NET5 270 aaPredicted RBP23.13■■□□□ 1.29
RAPGEF1-206ENST00000438647 MYRIPQ8NFW9 859 aa23.13■■□□□ 1.29
RAPGEF1-206ENST00000438647 OR4F6Q8NGB9 312 aa23.13■■□□□ 1.29
RAPGEF1-206ENST00000438647 BARD1Q99728 777 aaKnown RBP23.13■■□□□ 1.29
RAPGEF1-206ENST00000438647 ELOVL6Q9H5J4 265 aa23.13■■□□□ 1.29
RAPGEF1-206ENST00000438647 CLDN16Q9Y5I7 305 aa23.13■■□□□ 1.29
RAPGEF1-206ENST00000438647 TCP11X1B4DZS4 312 aa23.12■■□□□ 1.29
RAPGEF1-206ENST00000438647 CDH16O75309 829 aa23.12■■□□□ 1.29
RAPGEF1-206ENST00000438647 SUPT7LO94864 414 aa23.12■■□□□ 1.29
RAPGEF1-206ENST00000438647 F10P00742 488 aa23.12■■□□□ 1.29
RAPGEF1-206ENST00000438647 IFNA16P05015 189 aa23.12■■□□□ 1.29
RAPGEF1-206ENST00000438647 GNLYP22749 145 aa23.12■■□□□ 1.29
RAPGEF1-206ENST00000438647 TLX1P31314 330 aaPredicted RBP23.12■■□□□ 1.29
RAPGEF1-206ENST00000438647 SLCO1A2P46721 670 aa23.12■■□□□ 1.29
RAPGEF1-206ENST00000438647 CLCN2P51788 898 aa23.12■■□□□ 1.29
RAPGEF1-206ENST00000438647 NEK2P51955 445 aa23.12■■□□□ 1.29
RAPGEF1-206ENST00000438647 CDH13P55290 713 aa23.12■■□□□ 1.29
RAPGEF1-206ENST00000438647 VSNL1P62760 191 aa23.12■■□□□ 1.29
RAPGEF1-206ENST00000438647 FAM180AQ6UWF9 173 aa23.12■■□□□ 1.29
RAPGEF1-206ENST00000438647 GPR180Q86V85 440 aa23.12■■□□□ 1.29
RAPGEF1-206ENST00000438647 RPS19BP1Q86WX3 136 aaKnown RBP23.12■■□□□ 1.29
RAPGEF1-206ENST00000438647 NUDT13Q86X67 352 aa23.12■■□□□ 1.29
RAPGEF1-206ENST00000438647 TMEM132CQ8N3T6 1108 aa23.12■■□□□ 1.29
RAPGEF1-206ENST00000438647 KIF2BQ8N4N8 673 aa23.12■■□□□ 1.29
RAPGEF1-206ENST00000438647 DAZLQ92904 295 aaKnown RBP23.12■■□□□ 1.29
RAPGEF1-206ENST00000438647 UTP23Q9BRU9 249 aaKnown RBP23.12■■□□□ 1.29
RAPGEF1-206ENST00000438647 SORBS1Q9BX66 1292 aaKnown RBP23.12■■□□□ 1.29
RAPGEF1-206ENST00000438647 DEFB126Q9BYW3 111 aa23.12■■□□□ 1.29
RAPGEF1-206ENST00000438647 LYARQ9NX58 379 aaKnown RBP23.12■■□□□ 1.29
RAPGEF1-206ENST00000438647 PPIEQ9UNP9 301 aaKnown RBP23.12■■□□□ 1.29
RAPGEF1-206ENST00000438647 SMIM23A6NLE4 172 aa23.11■■□□□ 1.29
RAPGEF1-206ENST00000438647 TGFBR3LH3BV60 316 aa23.11■■□□□ 1.29
RAPGEF1-206ENST00000438647 DLX3O60479 287 aa23.11■■□□□ 1.29
RAPGEF1-206ENST00000438647 PPP2R1BP30154 601 aa23.11■■□□□ 1.29
RAPGEF1-206ENST00000438647 HSD17B3P37058 310 aa23.11■■□□□ 1.29
RAPGEF1-206ENST00000438647 BUD31P41223 144 aaPredicted RBP23.11■■□□□ 1.29
RAPGEF1-206ENST00000438647 CCT5P48643 541 aa23.11■■□□□ 1.29
RAPGEF1-206ENST00000438647 CLCQ05315 142 aa23.11■■□□□ 1.29
RAPGEF1-206ENST00000438647 ZNF678Q5SXM1 525 aa23.11■■□□□ 1.29
RAPGEF1-206ENST00000438647 CYP20A1Q6UW02 462 aa23.11■■□□□ 1.29
RAPGEF1-206ENST00000438647 RPS27LQ71UM5 84 aaKnown RBP23.11■■□□□ 1.29
RAPGEF1-206ENST00000438647 MTFMTQ96DP5 389 aaKnown RBP23.11■■□□□ 1.29
RAPGEF1-206ENST00000438647 CCDC126Q96EE4 140 aa23.11■■□□□ 1.29
RAPGEF1-206ENST00000438647 VMP1Q96GC9 406 aa23.11■■□□□ 1.29
RAPGEF1-206ENST00000438647 ALOXE3Q9BYJ1 711 aa23.11■■□□□ 1.29
RAPGEF1-206ENST00000438647 CDCP1Q9H5V8 836 aa23.11■■□□□ 1.29
RAPGEF1-206ENST00000438647 DDX31Q9H8H2 851 aaKnown RBP23.11■■□□□ 1.29
RAPGEF1-206ENST00000438647 AHSPQ9NZD4 102 aa23.11■■□□□ 1.29
RAPGEF1-206ENST00000438647 VTI1BQ9UEU0 232 aa23.11■■□□□ 1.29
RAPGEF1-206ENST00000438647 TRPS1Q9UHF7 1281 aa23.11■■□□□ 1.29
RAPGEF1-206ENST00000438647 SNX6Q9UNH7 406 aa23.11■■□□□ 1.29
RAPGEF1-206ENST00000438647 STK38LQ9Y2H1 464 aa23.11■■□□□ 1.29
RAPGEF1-206ENST00000438647 CLCA3PQ9Y6N3 262 aa23.11■■□□□ 1.29
RAPGEF1-206ENST00000438647 A0A1W2PPM1 405 aa23.1■■□□□ 1.29
RAPGEF1-206ENST00000438647 PRAMEF2O60811 474 aa23.1■■□□□ 1.29
RAPGEF1-206ENST00000438647 IMPDH1P20839 514 aa23.1■■□□□ 1.29
RAPGEF1-206ENST00000438647 UQCRFS1P47985 274 aa23.1■■□□□ 1.29
RAPGEF1-206ENST00000438647 PRKAA2P54646 552 aa23.1■■□□□ 1.29
RAPGEF1-206ENST00000438647 TNFRSF17Q02223 184 aa23.1■■□□□ 1.29
RAPGEF1-206ENST00000438647 BIKQ13323 160 aa23.1■■□□□ 1.29
RAPGEF1-206ENST00000438647 HORMAD2Q8N7B1 307 aa23.1■■□□□ 1.29
RAPGEF1-206ENST00000438647 BCORP1Q8N888 145 aa23.1■■□□□ 1.29
RAPGEF1-206ENST00000438647 APCDD1LQ8NCL9 501 aa23.1■■□□□ 1.29
RAPGEF1-206ENST00000438647 OR14A16Q8NHC5 309 aa23.1■■□□□ 1.29
RAPGEF1-206ENST00000438647 GRHL3Q8TE85 626 aa23.1■■□□□ 1.29
RAPGEF1-206ENST00000438647 TRPC4APQ8TEL6 797 aa23.1■■□□□ 1.29
RAPGEF1-206ENST00000438647 TANKQ92844 425 aa23.1■■□□□ 1.29
RAPGEF1-206ENST00000438647 TMEM237Q96Q45 408 aa23.1■■□□□ 1.29
RAPGEF1-206ENST00000438647 NPAS2Q99743 824 aa23.1■■□□□ 1.29
RAPGEF1-206ENST00000438647 ZNF717Q9BY31 904 aaPredicted RBP23.1■■□□□ 1.29
RAPGEF1-206ENST00000438647 RPF2Q9H7B2 306 aaKnown RBP23.1■■□□□ 1.29
RAPGEF1-206ENST00000438647 NTNG1Q9Y2I2 539 aa23.1■■□□□ 1.29
RAPGEF1-206ENST00000438647 GABRR3A8MPY1 467 aa23.09■■□□□ 1.29
RAPGEF1-206ENST00000438647 FCHO1O14526 889 aa23.09■■□□□ 1.29
RAPGEF1-206ENST00000438647 LDB3O75112 727 aa23.09■■□□□ 1.29
RAPGEF1-206ENST00000438647 ETHE1O95571 254 aa23.09■■□□□ 1.29
RAPGEF1-206ENST00000438647 MLYCDO95822 493 aa23.09■■□□□ 1.29
RAPGEF1-206ENST00000438647 BSGP35613 385 aa23.09■■□□□ 1.29
RAPGEF1-206ENST00000438647 TUBA3CQ13748 450 aa23.09■■□□□ 1.29
RAPGEF1-206ENST00000438647 ELOAQ14241 798 aaKnown RBP23.09■■□□□ 1.29
RAPGEF1-206ENST00000438647 NR6A1Q15406 480 aa23.09■■□□□ 1.29
RAPGEF1-206ENST00000438647 CCDC153Q494R4 210 aa23.09■■□□□ 1.29
RAPGEF1-206ENST00000438647 UNC50Q53HI1 259 aa23.09■■□□□ 1.29
RAPGEF1-206ENST00000438647 LETMD1Q6P1Q0 360 aa23.09■■□□□ 1.29
RAPGEF1-206ENST00000438647 WDR93Q6P2C0 686 aa23.09■■□□□ 1.29
RAPGEF1-206ENST00000438647 EMBQ6PCB8 327 aa23.09■■□□□ 1.29
RAPGEF1-206ENST00000438647 TUBA3EQ6PEY2 450 aa23.09■■□□□ 1.29
RAPGEF1-206ENST00000438647 PAGE2Q7Z2X7 111 aa23.09■■□□□ 1.29
RAPGEF1-206ENST00000438647 EPS8L3Q8TE67 593 aaKnown RBP23.09■■□□□ 1.29
RAPGEF1-206ENST00000438647 FAR1Q8WVX9 515 aa23.09■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms