RNA–Protein interactions for RNA: ENST00000437983.2

SMAD9-IT1-201, SMAD9 intronic transcript 1, humanhuman

TSL 3 BASIC

Gene SMAD9-IT1, Length 504 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-IT1-201ENST00000437983 ZFP64Q9NPA5 681 aa11.24□□□□□ -0.61
SMAD9-IT1-201ENST00000437983 DDX56Q9NY93 547 aaKnown RBP11.24□□□□□ -0.61
SMAD9-IT1-201ENST00000437983 ZNF226Q9NYT6 803 aa11.24□□□□□ -0.61
SMAD9-IT1-201ENST00000437983 GALPQ9UBC7 116 aa11.24□□□□□ -0.61
SMAD9-IT1-201ENST00000437983 SLC6A5Q9Y345 797 aa11.24□□□□□ -0.61
SMAD9-IT1-201ENST00000437983 CLDN16Q9Y5I7 305 aa11.24□□□□□ -0.61
SMAD9-IT1-201ENST00000437983 hCG_1818297A0A087WSY0 165 aa11.23□□□□□ -0.61
SMAD9-IT1-201ENST00000437983 TMEM238LA0A1B0GVL6 79 aa11.23□□□□□ -0.61
SMAD9-IT1-201ENST00000437983 PSIP1O75475 530 aaKnown RBP11.23□□□□□ -0.61
SMAD9-IT1-201ENST00000437983 LRATO95237 230 aa11.23□□□□□ -0.61
SMAD9-IT1-201ENST00000437983 PLAUP00749 431 aa11.23□□□□□ -0.61
SMAD9-IT1-201ENST00000437983 ALOX12P18054 663 aa11.23□□□□□ -0.61
SMAD9-IT1-201ENST00000437983 OCRLQ01968 901 aa11.23□□□□□ -0.61
SMAD9-IT1-201ENST00000437983 MYL5Q02045 173 aa11.23□□□□□ -0.61
SMAD9-IT1-201ENST00000437983 GBX1Q14549 363 aa11.23□□□□□ -0.61
SMAD9-IT1-201ENST00000437983 KCNJ11Q14654 390 aa11.23□□□□□ -0.61
SMAD9-IT1-201ENST00000437983 FASTKD1Q53R41 847 aaKnown RBP11.23□□□□□ -0.61
SMAD9-IT1-201ENST00000437983 IL17RELQ6ZVW7 336 aa11.23□□□□□ -0.61
SMAD9-IT1-201ENST00000437983 ZNF550Q7Z398 422 aa11.23□□□□□ -0.61
SMAD9-IT1-201ENST00000437983 SLC35G2Q8TBE7 412 aa11.23□□□□□ -0.61
SMAD9-IT1-201ENST00000437983 JSRP1Q96MG2 331 aaPredicted RBP11.23□□□□□ -0.61
SMAD9-IT1-201ENST00000437983 PANX3Q96QZ0 392 aa11.23□□□□□ -0.61
SMAD9-IT1-201ENST00000437983 FERMT1Q9BQL6 677 aa11.23□□□□□ -0.61
SMAD9-IT1-201ENST00000437983 MED18Q9BUE0 208 aa11.23□□□□□ -0.61
SMAD9-IT1-201ENST00000437983 HEMGNQ9BXL5 484 aa11.23□□□□□ -0.61
SMAD9-IT1-201ENST00000437983 ANGPTL4Q9BY76 406 aa11.23□□□□□ -0.61
SMAD9-IT1-201ENST00000437983 PSD3Q9NYI0 1048 aa11.23□□□□□ -0.61
SMAD9-IT1-201ENST00000437983 MYOCOSA0A1B0GUC4 107 aa11.22□□□□□ -0.61
SMAD9-IT1-201ENST00000437983 ADAM11O75078 769 aa11.22□□□□□ -0.61
SMAD9-IT1-201ENST00000437983 METTL18O95568 372 aa11.22□□□□□ -0.61
SMAD9-IT1-201ENST00000437983 SYF2O95926 243 aaKnown RBP11.22□□□□□ -0.61
SMAD9-IT1-201ENST00000437983 SERPING1P05155 500 aa11.22□□□□□ -0.61
SMAD9-IT1-201ENST00000437983 ZNF888P0CJ79 500 aaPredicted RBP11.22□□□□□ -0.61
SMAD9-IT1-201ENST00000437983 IDUAP35475 653 aa11.22□□□□□ -0.61
SMAD9-IT1-201ENST00000437983 KCNJ2P63252 427 aa11.22□□□□□ -0.61
SMAD9-IT1-201ENST00000437983 TERF2Q15554 542 aa11.22□□□□□ -0.61
SMAD9-IT1-201ENST00000437983 P3H1Q32P28 736 aa11.22□□□□□ -0.61
SMAD9-IT1-201ENST00000437983 ACSBG2Q5FVE4 666 aa11.22□□□□□ -0.61
SMAD9-IT1-201ENST00000437983 CTSL3PQ5NE16 218 aa11.22□□□□□ -0.61
SMAD9-IT1-201ENST00000437983 VASNQ6EMK4 673 aa11.22□□□□□ -0.61
SMAD9-IT1-201ENST00000437983 HSDL2Q6YN16 418 aa11.22□□□□□ -0.61
SMAD9-IT1-201ENST00000437983 SYDE1Q6ZW31 735 aaPredicted RBP11.22□□□□□ -0.61
SMAD9-IT1-201ENST00000437983 PM20D2Q8IYS1 436 aa11.22□□□□□ -0.61
SMAD9-IT1-201ENST00000437983 GCNT2Q8N0V5 402 aa11.22□□□□□ -0.61
SMAD9-IT1-201ENST00000437983 CTNNBL1Q8WYA6 563 aaPredicted RBP11.22□□□□□ -0.61
SMAD9-IT1-201ENST00000437983 MED12Q93074 2177 aa11.22□□□□□ -0.61
SMAD9-IT1-201ENST00000437983 INTS12Q96CB8 462 aaKnown RBP11.22□□□□□ -0.61
SMAD9-IT1-201ENST00000437983 NTNG2Q96CW9 530 aa11.22□□□□□ -0.61
SMAD9-IT1-201ENST00000437983 WDYHV1Q96HA8 205 aa11.22□□□□□ -0.61
SMAD9-IT1-201ENST00000437983 LCORQ96JN0 433 aaPredicted RBP11.22□□□□□ -0.61
SMAD9-IT1-201ENST00000437983 SFXN3Q9BWM7 321 aa11.22□□□□□ -0.61
SMAD9-IT1-201ENST00000437983 SGPP1Q9BX95 441 aa11.22□□□□□ -0.61
SMAD9-IT1-201ENST00000437983 RBSNQ9H1K0 784 aa11.22□□□□□ -0.61
SMAD9-IT1-201ENST00000437983 CALHM2Q9HA72 323 aa11.22□□□□□ -0.61
SMAD9-IT1-201ENST00000437983 HOMER3Q9NSC5 361 aa11.22□□□□□ -0.61
SMAD9-IT1-201ENST00000437983 ZNHIT6Q9NWK9 470 aaKnown RBP11.22□□□□□ -0.61
SMAD9-IT1-201ENST00000437983 LCMT1Q9UIC8 334 aa11.22□□□□□ -0.61
SMAD9-IT1-201ENST00000437983 BZW2Q9Y6E2 419 aaKnown RBP11.22□□□□□ -0.61
SMAD9-IT1-201ENST00000437983 NINQ8N4C6 2090 aa11.21□□□□□ -0.61
SMAD9-IT1-201ENST00000437983 KPNA5O15131 536 aa11.21□□□□□ -0.61
SMAD9-IT1-201ENST00000437983 NDUFS4O43181 175 aa11.21□□□□□ -0.61
SMAD9-IT1-201ENST00000437983 CEP104O60308 925 aa11.21□□□□□ -0.61
SMAD9-IT1-201ENST00000437983 NIPSNAP2O75323 286 aa11.21□□□□□ -0.61
SMAD9-IT1-201ENST00000437983 ACSL3O95573 720 aa11.21□□□□□ -0.61
SMAD9-IT1-201ENST00000437983 SLC35G6P0C7Q6 338 aa11.21□□□□□ -0.61
SMAD9-IT1-201ENST00000437983 GDF1P27539 372 aa11.21□□□□□ -0.61
SMAD9-IT1-201ENST00000437983 CCKARP32238 428 aa11.21□□□□□ -0.61
SMAD9-IT1-201ENST00000437983 HSD17B2P37059 387 aa11.21□□□□□ -0.61
SMAD9-IT1-201ENST00000437983 RAB8AP61006 207 aa11.21□□□□□ -0.61
SMAD9-IT1-201ENST00000437983 KLHL38Q2WGJ6 581 aa11.21□□□□□ -0.61
SMAD9-IT1-201ENST00000437983 TSTD2Q5T7W7 516 aa11.21□□□□□ -0.61
SMAD9-IT1-201ENST00000437983 SLC22A10Q63ZE4 541 aa11.21□□□□□ -0.61
SMAD9-IT1-201ENST00000437983 C12orf54Q6X4T0 127 aa11.21□□□□□ -0.61
SMAD9-IT1-201ENST00000437983 MFSD9Q8NBP5 474 aa11.21□□□□□ -0.61
SMAD9-IT1-201ENST00000437983 UGT2B28Q9BY64 529 aa11.21□□□□□ -0.61
SMAD9-IT1-201ENST00000437983 SHARPINQ9H0F6 387 aa11.21□□□□□ -0.61
SMAD9-IT1-201ENST00000437983 SLCO5A1Q9H2Y9 848 aa11.21□□□□□ -0.61
SMAD9-IT1-201ENST00000437983 QPCTLQ9NXS2 382 aa11.21□□□□□ -0.61
SMAD9-IT1-201ENST00000437983 BOKQ9UMX3 212 aaPredicted RBP11.21□□□□□ -0.61
SMAD9-IT1-201ENST00000437983 LAMP3Q9UQV4 416 aa11.21□□□□□ -0.61
SMAD9-IT1-201ENST00000437983 NBEAL2Q6ZNJ1 2754 aa11.21□□□□□ -0.62
SMAD9-IT1-201ENST00000437983 CTAGE15A4D2H0 777 aa11.2□□□□□ -0.62
SMAD9-IT1-201ENST00000437983 ZNF839A8K0R7 811 aa11.2□□□□□ -0.62
SMAD9-IT1-201ENST00000437983 PSMD12O00232 456 aaPredicted RBP11.2□□□□□ -0.62
SMAD9-IT1-201ENST00000437983 NDUFS7O75251 213 aa11.2□□□□□ -0.62
SMAD9-IT1-201ENST00000437983 TRAPPC6AO75865 159 aa11.2□□□□□ -0.62
SMAD9-IT1-201ENST00000437983 SERPIND1P05546 499 aa11.2□□□□□ -0.62
SMAD9-IT1-201ENST00000437983 RNH1P13489 461 aaKnown RBP11.2□□□□□ -0.62
SMAD9-IT1-201ENST00000437983 ATF4P18848 351 aaPredicted RBP11.2□□□□□ -0.62
SMAD9-IT1-201ENST00000437983 COMTP21964 271 aa11.2□□□□□ -0.62
SMAD9-IT1-201ENST00000437983 CTNNA2P26232 953 aa11.2□□□□□ -0.62
SMAD9-IT1-201ENST00000437983 IMPA1P29218 277 aa11.2□□□□□ -0.62
SMAD9-IT1-201ENST00000437983 HNF4AP41235 474 aa11.2□□□□□ -0.62
SMAD9-IT1-201ENST00000437983 HNRNPFP52597 415 aaKnown RBP11.2□□□□□ -0.62
SMAD9-IT1-201ENST00000437983 EIF3BP55884 814 aaKnown RBP11.2□□□□□ -0.62
SMAD9-IT1-201ENST00000437983 BMPR2Q13873 1038 aa11.2□□□□□ -0.62
SMAD9-IT1-201ENST00000437983 ZNF791Q3KP31 576 aaPredicted RBP11.2□□□□□ -0.62
SMAD9-IT1-201ENST00000437983 FAM174BQ3ZCQ3 159 aa11.2□□□□□ -0.62
SMAD9-IT1-201ENST00000437983 HIST2H2BDQ6DRA6 164 aa11.2□□□□□ -0.62
SMAD9-IT1-201ENST00000437983 CAVIN1Q6NZI2 390 aaKnown RBP11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms