RNA–Protein interactions for RNA: ENST00000436724.5

PTPRF-207, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 1 (best)

Gene PTPRF, Length 2,168 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-207ENST00000436724 FASP25445 335 aa20.04■□□□□ 0.8
PTPRF-207ENST00000436724 SOAT1P35610 550 aa20.04■□□□□ 0.8
PTPRF-207ENST00000436724 VMACQ2NL98 169 aa20.04■□□□□ 0.8
PTPRF-207ENST00000436724 DEFB133Q30KQ1 61 aa20.04■□□□□ 0.8
PTPRF-207ENST00000436724 CHERPQ8IWX8 916 aaKnown RBP20.04■□□□□ 0.8
PTPRF-207ENST00000436724 ARL14Q8N4G2 192 aa20.04■□□□□ 0.8
PTPRF-207ENST00000436724 CHST8Q9H2A9 424 aa20.04■□□□□ 0.8
PTPRF-207ENST00000436724 CXorf36Q9H7Y0 433 aa20.04■□□□□ 0.8
PTPRF-207ENST00000436724 UCKL1Q9NWZ5 548 aa20.04■□□□□ 0.8
PTPRF-207ENST00000436724 WBP11Q9Y2W2 641 aaKnown RBP20.04■□□□□ 0.8
PTPRF-207ENST00000436724 SNX8Q9Y5X2 465 aa20.04■□□□□ 0.8
PTPRF-207ENST00000436724 THADAQ6YHU6 1953 aa20.03■□□□□ 0.8
PTPRF-207ENST00000436724 A0A1W2PR48 441 aa20.03■□□□□ 0.8
PTPRF-207ENST00000436724 SAC3D1A6NKF1 404 aa20.03■□□□□ 0.8
PTPRF-207ENST00000436724 ZNF888P0CJ79 500 aaPredicted RBP20.03■□□□□ 0.8
PTPRF-207ENST00000436724 STXBP1P61764 594 aaKnown RBP20.03■□□□□ 0.8
PTPRF-207ENST00000436724 BTN3A2P78410 334 aa20.03■□□□□ 0.8
PTPRF-207ENST00000436724 SLC5A12Q1EHB4 618 aa20.03■□□□□ 0.8
PTPRF-207ENST00000436724 GKN2Q86XP6 184 aa20.03■□□□□ 0.8
PTPRF-207ENST00000436724 ZCCHC10Q8TBK6 192 aa20.03■□□□□ 0.8
PTPRF-207ENST00000436724 SH3GL3Q99963 347 aa20.03■□□□□ 0.8
PTPRF-207ENST00000436724 MRPS26Q9BYN8 205 aaKnown RBP20.03■□□□□ 0.8
PTPRF-207ENST00000436724 DCAF13Q9NV06 445 aaKnown RBP20.03■□□□□ 0.8
PTPRF-207ENST00000436724 ASB4Q9Y574 426 aa20.03■□□□□ 0.8
PTPRF-207ENST00000436724 COMMD3-BMI1R4GMX3 469 aa20.03■□□□□ 0.8
PTPRF-207ENST00000436724 FRYLO94915 3013 aa20.03■□□□□ 0.8
PTPRF-207ENST00000436724 PDPK1O15530 556 aa20.02■□□□□ 0.8
PTPRF-207ENST00000436724 AQP9O43315 295 aa20.02■□□□□ 0.8
PTPRF-207ENST00000436724 BMP2P12643 396 aa20.02■□□□□ 0.8
PTPRF-207ENST00000436724 ETFAP13804 333 aa20.02■□□□□ 0.8
PTPRF-207ENST00000436724 CRATP43155 626 aa20.02■□□□□ 0.8
PTPRF-207ENST00000436724 MANFP55145 182 aaKnown RBP20.02■□□□□ 0.8
PTPRF-207ENST00000436724 LRRC23Q53EV4 343 aaPredicted RBP20.02■□□□□ 0.8
PTPRF-207ENST00000436724 CPZQ66K79 652 aa20.02■□□□□ 0.8
PTPRF-207ENST00000436724 OOSP2Q86WS3 158 aa20.02■□□□□ 0.8
PTPRF-207ENST00000436724 BAHD1Q8TBE0 780 aaPredicted RBP20.02■□□□□ 0.8
PTPRF-207ENST00000436724 DNASE2BQ8WZ79 361 aa20.02■□□□□ 0.8
PTPRF-207ENST00000436724 TM4SF19Q96DZ7 209 aa20.02■□□□□ 0.8
PTPRF-207ENST00000436724 A0A0J9YY10 115 aa20.02■□□□□ 0.8
PTPRF-207ENST00000436724 PGRMC2O15173 223 aa20.02■□□□□ 0.8
PTPRF-207ENST00000436724 EIF2S1P05198 315 aaKnown RBP20.02■□□□□ 0.8
PTPRF-207ENST00000436724 SLC35G6P0C7Q6 338 aa20.02■□□□□ 0.8
PTPRF-207ENST00000436724 TXNL4AP83876 142 aaKnown RBP20.02■□□□□ 0.8
PTPRF-207ENST00000436724 HSPB3Q12988 150 aa20.02■□□□□ 0.8
PTPRF-207ENST00000436724 C18orf63Q68DL7 685 aa20.02■□□□□ 0.8
PTPRF-207ENST00000436724 MRM1Q6IN84 353 aaKnown RBP20.02■□□□□ 0.8
PTPRF-207ENST00000436724 DGCR14Q96DF8 476 aaKnown RBP20.02■□□□□ 0.8
PTPRF-207ENST00000436724 ZFYVE21Q9BQ24 234 aa20.02■□□□□ 0.8
PTPRF-207ENST00000436724 MAP4K5Q9Y4K4 846 aa20.02■□□□□ 0.8
PTPRF-207ENST00000436724 PDLIM1O00151 329 aa20.01■□□□□ 0.79
PTPRF-207ENST00000436724 VILLO15195 856 aa20.01■□□□□ 0.79
PTPRF-207ENST00000436724 BCAT2O15382 392 aaPredicted RBP20.01■□□□□ 0.79
PTPRF-207ENST00000436724 HCRTR1O43613 425 aa20.01■□□□□ 0.79
PTPRF-207ENST00000436724 NOBOXO60393 691 aa20.01■□□□□ 0.79
PTPRF-207ENST00000436724 TBX19O60806 448 aa20.01■□□□□ 0.79
PTPRF-207ENST00000436724 C9P02748 559 aa20.01■□□□□ 0.79
PTPRF-207ENST00000436724 RETP07949 1114 aa20.01■□□□□ 0.79
PTPRF-207ENST00000436724 PTGER1P34995 402 aa20.01■□□□□ 0.79
PTPRF-207ENST00000436724 CCT8P50990 548 aa20.01■□□□□ 0.79
PTPRF-207ENST00000436724 PCBP4P57723 403 aaKnown RBP20.01■□□□□ 0.79
PTPRF-207ENST00000436724 TRA2BP62995 288 aaKnown RBP20.01■□□□□ 0.79
PTPRF-207ENST00000436724 RGS1Q08116 209 aa20.01■□□□□ 0.79
PTPRF-207ENST00000436724 LSAMPQ13449 338 aa20.01■□□□□ 0.79
PTPRF-207ENST00000436724 APOFQ13790 326 aa20.01■□□□□ 0.79
PTPRF-207ENST00000436724 NADK2Q4G0N4 442 aa20.01■□□□□ 0.79
PTPRF-207ENST00000436724 FAM98BQ52LJ0 330 aaKnown RBP20.01■□□□□ 0.79
PTPRF-207ENST00000436724 CHCHD2P9Q5T1J5 151 aaPredicted RBP20.01■□□□□ 0.79
PTPRF-207ENST00000436724 RNF130Q86XS8 419 aa20.01■□□□□ 0.79
PTPRF-207ENST00000436724 EPHX4Q8IUS5 362 aa20.01■□□□□ 0.79
PTPRF-207ENST00000436724 TRIML2Q8N7C3 387 aa20.01■□□□□ 0.79
PTPRF-207ENST00000436724 ANKFN1Q8N957 763 aa20.01■□□□□ 0.79
PTPRF-207ENST00000436724 UTP15Q8TED0 518 aaKnown RBP20.01■□□□□ 0.79
PTPRF-207ENST00000436724 GMEB1Q9Y692 573 aa20.01■□□□□ 0.79
PTPRF-207ENST00000436724 SOCS2O14508 198 aa20.01■□□□□ 0.79
PTPRF-207ENST00000436724 RAP2AP10114 183 aa20.01■□□□□ 0.79
PTPRF-207ENST00000436724 PPIBP23284 216 aaKnown RBP20.01■□□□□ 0.79
PTPRF-207ENST00000436724 CHI3L1P36222 383 aaPredicted RBP20.01■□□□□ 0.79
PTPRF-207ENST00000436724 FNTBP49356 437 aa20.01■□□□□ 0.79
PTPRF-207ENST00000436724 HNRNPKP61978 463 aaKnown RBP eCLIP20.01■□□□□ 0.792e-6■■■□□ 17.3
PTPRF-207ENST00000436724 CHRNB3Q05901 458 aa20.01■□□□□ 0.79
PTPRF-207ENST00000436724 SRSF5Q13243 272 aaKnown RBP20.01■□□□□ 0.79
PTPRF-207ENST00000436724 RBM12BQ8IXT5 1001 aaKnown RBP20.01■□□□□ 0.79
PTPRF-207ENST00000436724 SRFBP1Q8NEF9 429 aaKnown RBP20.01■□□□□ 0.79
PTPRF-207ENST00000436724 OR52E4Q8NGH9 312 aa20.01■□□□□ 0.79
PTPRF-207ENST00000436724 NT5CQ8TCD5 201 aa20.01■□□□□ 0.79
PTPRF-207ENST00000436724 GAL3ST3Q96A11 431 aa20.01■□□□□ 0.79
PTPRF-207ENST00000436724 MAPKAP1Q9BPZ7 522 aa20.01■□□□□ 0.79
PTPRF-207ENST00000436724 DUSP15Q9H1R2 295 aaPredicted RBP20.01■□□□□ 0.79
PTPRF-207ENST00000436724 A0A1B0GTW7 788 aa20■□□□□ 0.79
PTPRF-207ENST00000436724 A0A1W2PS29 197 aa20■□□□□ 0.79
PTPRF-207ENST00000436724 H0YGG7 62 aa20■□□□□ 0.79
PTPRF-207ENST00000436724 UBXN7O94888 489 aa20■□□□□ 0.79
PTPRF-207ENST00000436724 AIFM1O95831 613 aa20■□□□□ 0.79
PTPRF-207ENST00000436724 ATP6V1B1P15313 513 aa20■□□□□ 0.79
PTPRF-207ENST00000436724 ST6GAL1P15907 406 aa20■□□□□ 0.79
PTPRF-207ENST00000436724 GSTM5P46439 218 aa20■□□□□ 0.79
PTPRF-207ENST00000436724 FASLGP48023 281 aa20■□□□□ 0.79
PTPRF-207ENST00000436724 ARF3P61204 181 aaPredicted RBP20■□□□□ 0.79
PTPRF-207ENST00000436724 ZNF750Q32MQ0 723 aa20■□□□□ 0.79
PTPRF-207ENST00000436724 DEFB134Q4QY38 66 aa20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms