RNA–Protein interactions for RNA: ENST00000435891.5

CLSTN1-203, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 3,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-203ENST00000435891 LOC105371267A0A1B0GV96 52 aa9.95□□□□□ -0.82
CLSTN1-203ENST00000435891 HOXC11O43248 304 aaPredicted RBP9.95□□□□□ -0.82
CLSTN1-203ENST00000435891 RECKO95980 971 aa9.95□□□□□ -0.82
CLSTN1-203ENST00000435891 DBTP11182 482 aaKnown RBP9.95□□□□□ -0.82
CLSTN1-203ENST00000435891 PPM1AP35813 382 aa9.95□□□□□ -0.82
CLSTN1-203ENST00000435891 PCDH1Q08174 1060 aa9.95□□□□□ -0.82
CLSTN1-203ENST00000435891 STK11Q15831 433 aa9.95□□□□□ -0.82
CLSTN1-203ENST00000435891 NLRP8Q86W28 1048 aa9.95□□□□□ -0.82
CLSTN1-203ENST00000435891 P3H2Q8IVL5 708 aa9.95□□□□□ -0.82
CLSTN1-203ENST00000435891 KLHDC8AQ8IYD2 350 aa9.95□□□□□ -0.82
CLSTN1-203ENST00000435891 C16orf78Q8WTQ4 265 aa9.95□□□□□ -0.82
CLSTN1-203ENST00000435891 GGHQ92820 318 aa9.95□□□□□ -0.82
CLSTN1-203ENST00000435891 ZDHHC4Q9NPG8 344 aa9.95□□□□□ -0.82
CLSTN1-203ENST00000435891 SPASTQ9UBP0 616 aa9.95□□□□□ -0.82
CLSTN1-203ENST00000435891 ATP6V1HQ9UI12 483 aa9.95□□□□□ -0.82
CLSTN1-203ENST00000435891 PCDHGA2Q9Y5H1 932 aa9.95□□□□□ -0.82
CLSTN1-203ENST00000435891 DYRK3O43781 588 aa9.95□□□□□ -0.82
CLSTN1-203ENST00000435891 STSP08842 583 aa9.95□□□□□ -0.82
CLSTN1-203ENST00000435891 IRS1P35568 1242 aa9.95□□□□□ -0.82
CLSTN1-203ENST00000435891 GGT2P36268 569 aa9.95□□□□□ -0.82
CLSTN1-203ENST00000435891 RPS26P62854 115 aaKnown RBP9.95□□□□□ -0.82
CLSTN1-203ENST00000435891 EEF1A2Q05639 463 aaKnown RBP9.95□□□□□ -0.82
CLSTN1-203ENST00000435891 NFE2L1Q14494 772 aa9.95□□□□□ -0.82
CLSTN1-203ENST00000435891 HIST2H2ACQ16777 129 aaPredicted RBP9.95□□□□□ -0.82
CLSTN1-203ENST00000435891 DGUOKQ16854 277 aa9.95□□□□□ -0.82
CLSTN1-203ENST00000435891 PXDC1Q5TGL8 231 aa9.95□□□□□ -0.82
CLSTN1-203ENST00000435891 VN1R5Q7Z5H4 357 aa9.95□□□□□ -0.82
CLSTN1-203ENST00000435891 GALNT12Q8IXK2 581 aa9.95□□□□□ -0.82
CLSTN1-203ENST00000435891 LRRC56Q8IYG6 542 aaPredicted RBP9.95□□□□□ -0.82
CLSTN1-203ENST00000435891 LGI4Q8N135 537 aa9.95□□□□□ -0.82
CLSTN1-203ENST00000435891 SVOPQ8N4V2 548 aa9.95□□□□□ -0.82
CLSTN1-203ENST00000435891 UTP15Q8TED0 518 aaKnown RBP9.95□□□□□ -0.82
CLSTN1-203ENST00000435891 FOPNLQ96NB1 174 aa9.95□□□□□ -0.82
CLSTN1-203ENST00000435891 TTYH2Q9BSA4 534 aa9.95□□□□□ -0.82
CLSTN1-203ENST00000435891 ABCG4Q9H172 646 aa9.95□□□□□ -0.82
CLSTN1-203ENST00000435891 GPBP1L1Q9HC44 474 aaPredicted RBP9.95□□□□□ -0.82
CLSTN1-203ENST00000435891 NFKBIL1Q9UBC1 381 aaPredicted RBP9.95□□□□□ -0.82
CLSTN1-203ENST00000435891 CRNNQ9UBG3 495 aaPredicted RBP9.95□□□□□ -0.82
CLSTN1-203ENST00000435891 PSORS1C1Q9UIG5 152 aa9.95□□□□□ -0.82
CLSTN1-203ENST00000435891 FAM172BPA6NC97 362 aa9.94□□□□□ -0.82
CLSTN1-203ENST00000435891 EFCAB9A8MZ26 197 aa9.94□□□□□ -0.82
CLSTN1-203ENST00000435891 RTCAO00442 366 aaKnown RBP9.94□□□□□ -0.82
CLSTN1-203ENST00000435891 CDK2AP1O14519 115 aa9.94□□□□□ -0.82
CLSTN1-203ENST00000435891 APOA1P02647 267 aa9.94□□□□□ -0.82
CLSTN1-203ENST00000435891 GADD45AP24522 165 aa9.94□□□□□ -0.82
CLSTN1-203ENST00000435891 BMPR1AP36894 532 aa9.94□□□□□ -0.82
CLSTN1-203ENST00000435891 CYP4F2P78329 520 aa9.94□□□□□ -0.82
CLSTN1-203ENST00000435891 LRIT3Q3SXY7 679 aa9.94□□□□□ -0.82
CLSTN1-203ENST00000435891 TUBA3EQ6PEY2 450 aa9.94□□□□□ -0.82
CLSTN1-203ENST00000435891 PLD3Q8IV08 490 aa9.94□□□□□ -0.82
CLSTN1-203ENST00000435891 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.94□□□□□ -0.82
CLSTN1-203ENST00000435891 DNAJC22Q8N4W6 341 aa9.94□□□□□ -0.82
CLSTN1-203ENST00000435891 GOT1L1Q8NHS2 421 aaPredicted RBP9.94□□□□□ -0.82
CLSTN1-203ENST00000435891 RHOXF1Q8NHV9 184 aa9.94□□□□□ -0.82
CLSTN1-203ENST00000435891 S100ZQ8WXG8 99 aa9.94□□□□□ -0.82
CLSTN1-203ENST00000435891 GTPBP3Q969Y2 492 aaKnown RBP9.94□□□□□ -0.82
CLSTN1-203ENST00000435891 TRIM43Q96BQ3 446 aaPredicted RBP9.94□□□□□ -0.82
CLSTN1-203ENST00000435891 METTL2AQ96IZ6 378 aaKnown RBP9.94□□□□□ -0.82
CLSTN1-203ENST00000435891 BHLHE41Q9C0J9 482 aaPredicted RBP9.94□□□□□ -0.82
CLSTN1-203ENST00000435891 C6orf62Q9GZU0 229 aaPredicted RBP9.94□□□□□ -0.82
CLSTN1-203ENST00000435891 FBXO8Q9NRD0 319 aa9.94□□□□□ -0.82
CLSTN1-203ENST00000435891 DPM1O60762 260 aa9.94□□□□□ -0.82
CLSTN1-203ENST00000435891 IL3P08700 152 aa9.94□□□□□ -0.82
CLSTN1-203ENST00000435891 C1GALT1C1LP0DN25 315 aa9.94□□□□□ -0.82
CLSTN1-203ENST00000435891 P2RX3P56373 397 aa9.94□□□□□ -0.82
CLSTN1-203ENST00000435891 DAB2P98082 770 aa9.94□□□□□ -0.82
CLSTN1-203ENST00000435891 TEAD4Q15561 434 aa9.94□□□□□ -0.82
CLSTN1-203ENST00000435891 DUSP7Q16829 419 aa9.94□□□□□ -0.82
CLSTN1-203ENST00000435891 GCNT6Q5T4J0 391 aa9.94□□□□□ -0.82
CLSTN1-203ENST00000435891 FAM71E1Q6IPT2 247 aa9.94□□□□□ -0.82
CLSTN1-203ENST00000435891 FAM83HQ6ZRV2 1179 aaPredicted RBP9.94□□□□□ -0.82
CLSTN1-203ENST00000435891 TRMT11Q7Z4G4 463 aaKnown RBP9.94□□□□□ -0.82
CLSTN1-203ENST00000435891 OR52N2Q8NGI0 321 aa9.94□□□□□ -0.82
CLSTN1-203ENST00000435891 NXPE3Q969Y0 559 aa9.94□□□□□ -0.82
CLSTN1-203ENST00000435891 PPCDCQ96CD2 204 aa9.94□□□□□ -0.82
CLSTN1-203ENST00000435891 DTD2Q96FN9 168 aa9.94□□□□□ -0.82
CLSTN1-203ENST00000435891 SLC6A16Q9GZN6 736 aa9.94□□□□□ -0.82
CLSTN1-203ENST00000435891 CCNB1IP1Q9NPC3 277 aa9.94□□□□□ -0.82
CLSTN1-203ENST00000435891 PAQR5Q9NXK6 330 aaPredicted RBP9.94□□□□□ -0.82
CLSTN1-203ENST00000435891 C5AR2Q9P296 337 aa9.94□□□□□ -0.82
CLSTN1-203ENST00000435891 OSGIN1Q9UJX0 560 aa9.94□□□□□ -0.82
CLSTN1-203ENST00000435891 MTCL1Q9Y4B5 1905 aaKnown RBP9.94□□□□□ -0.82
CLSTN1-203ENST00000435891 ALPK3Q96L96 1907 aa9.94□□□□□ -0.82
CLSTN1-203ENST00000435891 H3BUI4 141 aa9.94□□□□□ -0.82
CLSTN1-203ENST00000435891 TBX6O95947 436 aaPredicted RBP9.94□□□□□ -0.82
CLSTN1-203ENST00000435891 PTHP01270 115 aa9.94□□□□□ -0.82
CLSTN1-203ENST00000435891 PCSK2P16519 638 aa9.94□□□□□ -0.82
CLSTN1-203ENST00000435891 GABRB1P18505 474 aa9.94□□□□□ -0.82
CLSTN1-203ENST00000435891 PPIBP23284 216 aaKnown RBP9.94□□□□□ -0.82
CLSTN1-203ENST00000435891 NNMTP40261 264 aa9.94□□□□□ -0.82
CLSTN1-203ENST00000435891 PRIM2P49643 509 aa9.94□□□□□ -0.82
CLSTN1-203ENST00000435891 CDK6Q00534 326 aa9.94□□□□□ -0.82
CLSTN1-203ENST00000435891 PDE7AQ13946 482 aa9.94□□□□□ -0.82
CLSTN1-203ENST00000435891 IFI44LQ53G44 452 aa9.94□□□□□ -0.82
CLSTN1-203ENST00000435891 LAS2Q8IYD9 372 aa9.94□□□□□ -0.82
CLSTN1-203ENST00000435891 ZHX1-C8orf76Q96EF9 292 aa9.94□□□□□ -0.82
CLSTN1-203ENST00000435891 SPATA9Q9BWV2 254 aa9.94□□□□□ -0.82
CLSTN1-203ENST00000435891 SGPP1Q9BX95 441 aa9.94□□□□□ -0.82
CLSTN1-203ENST00000435891 ITPAQ9BY32 194 aa9.94□□□□□ -0.82
CLSTN1-203ENST00000435891 PRRG3Q9BZD7 231 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms