RNA–Protein interactions for RNA: ENST00000434472.6

CD44-210, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,634 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-210ENST00000434472 INAQ16352 499 aa9.93□□□□□ -0.82
CD44-210ENST00000434472 TIGD6Q17RP2 521 aa9.93□□□□□ -0.82
CD44-210ENST00000434472 PRSS53Q2L4Q9 553 aa9.93□□□□□ -0.82
CD44-210ENST00000434472 SPDYE7PQ495Y7 208 aa9.93□□□□□ -0.82
CD44-210ENST00000434472 COLEC12Q5KU26 742 aa9.93□□□□□ -0.82
CD44-210ENST00000434472 ZNF367Q7RTV3 350 aa9.93□□□□□ -0.82
CD44-210ENST00000434472 ZBTB46Q86UZ6 589 aa9.93□□□□□ -0.82
CD44-210ENST00000434472 NUDT13Q86X67 352 aa9.93□□□□□ -0.82
CD44-210ENST00000434472 KBTBD8Q8NFY9 601 aa9.93□□□□□ -0.82
CD44-210ENST00000434472 OR52J3Q8NH60 311 aa9.93□□□□□ -0.82
CD44-210ENST00000434472 PSMA8Q8TAA3 256 aa9.93□□□□□ -0.82
CD44-210ENST00000434472 UTP15Q8TED0 518 aaKnown RBP9.93□□□□□ -0.82
CD44-210ENST00000434472 PROX1Q92786 737 aa9.93□□□□□ -0.82
CD44-210ENST00000434472 RSPRY1Q96DX4 576 aa9.93□□□□□ -0.82
CD44-210ENST00000434472 ZBED6CLQ96FA7 236 aaPredicted RBP9.93□□□□□ -0.82
CD44-210ENST00000434472 TEFMQ96QE5 360 aaKnown RBP9.93□□□□□ -0.82
CD44-210ENST00000434472 ZNF607Q96SK3 696 aa9.93□□□□□ -0.82
CD44-210ENST00000434472 MMP27Q9H306 513 aa9.93□□□□□ -0.82
CD44-210ENST00000434472 ACSS1Q9NUB1 689 aaPredicted RBP9.93□□□□□ -0.82
CD44-210ENST00000434472 TMEM184CQ9NVA4 438 aa9.93□□□□□ -0.82
CD44-210ENST00000434472 CLN6Q9NWW5 311 aa9.93□□□□□ -0.82
CD44-210ENST00000434472 TAC3Q9UHF0 121 aa9.93□□□□□ -0.82
CD44-210ENST00000434472 DAPK2Q9UIK4 370 aa9.93□□□□□ -0.82
CD44-210ENST00000434472 OSGIN1Q9UJX0 560 aa9.93□□□□□ -0.82
CD44-210ENST00000434472 KCND3Q9UK17 655 aa9.93□□□□□ -0.82
CD44-210ENST00000434472 ACSL5Q9ULC5 683 aa9.93□□□□□ -0.82
CD44-210ENST00000434472 MGAT4BQ9UQ53 548 aa9.93□□□□□ -0.82
CD44-210ENST00000434472 TMEM98Q9Y2Y6 226 aa9.93□□□□□ -0.82
CD44-210ENST00000434472 SNX8Q9Y5X2 465 aa9.93□□□□□ -0.82
CD44-210ENST00000434472 LINC01553A4QN01 128 aa9.93□□□□□ -0.82
CD44-210ENST00000434472 PRAMEF25A6NGN4 478 aa9.93□□□□□ -0.82
CD44-210ENST00000434472 PCDH17O14917 1159 aa9.93□□□□□ -0.82
CD44-210ENST00000434472 NDUFS4O43181 175 aa9.93□□□□□ -0.82
CD44-210ENST00000434472 ADAP00813 363 aa9.93□□□□□ -0.82
CD44-210ENST00000434472 RPLP0P05388 317 aaKnown RBP9.93□□□□□ -0.82
CD44-210ENST00000434472 SLC35G4P0C7Q5 338 aa9.93□□□□□ -0.82
CD44-210ENST00000434472 DRD2P14416 443 aa9.93□□□□□ -0.82
CD44-210ENST00000434472 SLC19A1P41440 591 aa9.93□□□□□ -0.82
CD44-210ENST00000434472 FRKP42685 505 aaPredicted RBP9.93□□□□□ -0.82
CD44-210ENST00000434472 IDH2P48735 452 aaKnown RBP9.93□□□□□ -0.82
CD44-210ENST00000434472 CD97P48960 835 aa9.93□□□□□ -0.82
CD44-210ENST00000434472 ANXA11P50995 505 aaKnown RBP9.93□□□□□ -0.82
CD44-210ENST00000434472 CRISP1P54107 249 aa9.93□□□□□ -0.82
CD44-210ENST00000434472 CASP9P55211 416 aa9.93□□□□□ -0.82
CD44-210ENST00000434472 NCS1P62166 190 aa9.93□□□□□ -0.82
CD44-210ENST00000434472 IRF3Q14653 427 aa9.93□□□□□ -0.82
CD44-210ENST00000434472 GAB4Q2WGN9 574 aa9.93□□□□□ -0.82
CD44-210ENST00000434472 TMEM240Q5SV17 173 aa9.93□□□□□ -0.82
CD44-210ENST00000434472 METRNLQ641Q3 311 aa9.93□□□□□ -0.82
CD44-210ENST00000434472 CEACAM20Q6UY09 585 aa9.93□□□□□ -0.82
CD44-210ENST00000434472 SLC46A3Q7Z3Q1 461 aa9.93□□□□□ -0.82
CD44-210ENST00000434472 HEATR4Q86WZ0 1026 aa9.93□□□□□ -0.82
CD44-210ENST00000434472 MMAAQ8IVH4 418 aaKnown RBP9.93□□□□□ -0.82
CD44-210ENST00000434472 MFSD4AQ8N468 514 aa9.93□□□□□ -0.82
CD44-210ENST00000434472 TTLQ8NG68 377 aa9.93□□□□□ -0.82
CD44-210ENST00000434472 MCFD2Q8NI22 146 aa9.93□□□□□ -0.82
CD44-210ENST00000434472 ZNF675Q8TD23 568 aa9.93□□□□□ -0.82
CD44-210ENST00000434472 SMARCD2Q92925 531 aa9.93□□□□□ -0.82
CD44-210ENST00000434472 ALPK1Q96QP1 1244 aa9.93□□□□□ -0.82
CD44-210ENST00000434472 F2RL3Q96RI0 385 aa9.93□□□□□ -0.82
CD44-210ENST00000434472 NIPSNAP1Q9BPW8 284 aa9.93□□□□□ -0.82
CD44-210ENST00000434472 RHNO1Q9BSD3 238 aa9.93□□□□□ -0.82
CD44-210ENST00000434472 RACGAP1Q9H0H5 632 aa9.93□□□□□ -0.82
CD44-210ENST00000434472 DCSTAMPQ9H295 470 aa9.93□□□□□ -0.82
CD44-210ENST00000434472 RLIMQ9NVW2 624 aa9.93□□□□□ -0.82
CD44-210ENST00000434472 CXXC1Q9P0U4 656 aaPredicted RBP9.93□□□□□ -0.82
CD44-210ENST00000434472 THAP10Q9P2Z0 257 aaPredicted RBP9.93□□□□□ -0.82
CD44-210ENST00000434472 PRKAG2Q9UGJ0 569 aa9.93□□□□□ -0.82
CD44-210ENST00000434472 PLAGL1Q9UM63 463 aa9.93□□□□□ -0.82
CD44-210ENST00000434472 SH3GLB1Q9Y371 365 aa9.93□□□□□ -0.82
CD44-210ENST00000434472 PCM1Q15154 2024 aa9.92□□□□□ -0.82
CD44-210ENST00000434472 MUC22E2RYF6 1773 aaPredicted RBP9.92□□□□□ -0.82
CD44-210ENST00000434472 TBC1D3BA6NDS4 549 aa9.92□□□□□ -0.82
CD44-210ENST00000434472 ZAR1LA6NP61 321 aa9.92□□□□□ -0.82
CD44-210ENST00000434472 M0R082 166 aa9.92□□□□□ -0.82
CD44-210ENST00000434472 TAF4O00268 1085 aa9.92□□□□□ -0.82
CD44-210ENST00000434472 FAAHO00519 579 aa9.92□□□□□ -0.82
CD44-210ENST00000434472 AXIN1O15169 862 aa9.92□□□□□ -0.82
CD44-210ENST00000434472 SERPINB7O75635 380 aa9.92□□□□□ -0.82
CD44-210ENST00000434472 FUCA1P04066 466 aa9.92□□□□□ -0.82
CD44-210ENST00000434472 PCCBP05166 539 aa9.92□□□□□ -0.82
CD44-210ENST00000434472 PIPP12273 146 aaPredicted RBP9.92□□□□□ -0.82
CD44-210ENST00000434472 CDH3P22223 829 aa9.92□□□□□ -0.82
CD44-210ENST00000434472 CD40LGP29965 261 aa9.92□□□□□ -0.82
CD44-210ENST00000434472 ALDH4A1P30038 563 aa9.92□□□□□ -0.82
CD44-210ENST00000434472 PCBP4P57723 403 aaKnown RBP9.92□□□□□ -0.82
CD44-210ENST00000434472 CDK3Q00526 305 aa9.92□□□□□ -0.82
CD44-210ENST00000434472 OXA1LQ15070 435 aa9.92□□□□□ -0.82
CD44-210ENST00000434472 AGERQ15109 404 aa9.92□□□□□ -0.82
CD44-210ENST00000434472 TIMM50Q3ZCQ8 353 aa9.92□□□□□ -0.82
CD44-210ENST00000434472 FAM78AQ5JUQ0 283 aa9.92□□□□□ -0.82
CD44-210ENST00000434472 TMEM236Q5W0B7 351 aa9.92□□□□□ -0.82
CD44-210ENST00000434472 Q6ZPB1 254 aaPredicted RBP9.92□□□□□ -0.82
CD44-210ENST00000434472 C6orf120Q7Z4R8 191 aa9.92□□□□□ -0.82
CD44-210ENST00000434472 CCDC103Q8IW40 242 aa9.92□□□□□ -0.82
CD44-210ENST00000434472 LINC00471Q8N535 108 aa9.92□□□□□ -0.82
CD44-210ENST00000434472 HORMAD2Q8N7B1 307 aa9.92□□□□□ -0.82
CD44-210ENST00000434472 AMER2Q8N7J2 671 aa9.92□□□□□ -0.82
CD44-210ENST00000434472 LMNTD1Q8N9Z9 388 aa9.92□□□□□ -0.82
CD44-210ENST00000434472 AQP11Q8NBQ7 271 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms