RNA–Protein interactions for RNA: ENST00000434030.1

SEMA3B-205, Transcript of semaphorin 3B, humanhuman

TSL 3

Gene SEMA3B, Length 1,011 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-205ENST00000434030 SP1P08047 785 aa20.65■□□□□ 0.9
SEMA3B-205ENST00000434030 RBP1P09455 135 aa20.65■□□□□ 0.9
SEMA3B-205ENST00000434030 EEF1DP29692 281 aaKnown RBP20.65■□□□□ 0.9
SEMA3B-205ENST00000434030 CYB561P49447 251 aa20.65■□□□□ 0.9
SEMA3B-205ENST00000434030 OR4C11Q6IEV9 310 aa20.65■□□□□ 0.9
SEMA3B-205ENST00000434030 SLC25A25Q6KCM7 469 aa20.65■□□□□ 0.9
SEMA3B-205ENST00000434030 METTL2BQ6P1Q9 378 aaKnown RBP20.65■□□□□ 0.9
SEMA3B-205ENST00000434030 TAOK1Q7L7X3 1001 aa20.65■□□□□ 0.9
SEMA3B-205ENST00000434030 GALNTL5Q7Z4T8 443 aa20.65■□□□□ 0.9
SEMA3B-205ENST00000434030 TMEM178AQ8NBL3 297 aa20.65■□□□□ 0.9
SEMA3B-205ENST00000434030 THAP3Q8WTV1 239 aaPredicted RBP20.65■□□□□ 0.9
SEMA3B-205ENST00000434030 NCLNQ969V3 563 aa20.65■□□□□ 0.9
SEMA3B-205ENST00000434030 VMP1Q96GC9 406 aa20.65■□□□□ 0.9
SEMA3B-205ENST00000434030 MTERF1Q99551 399 aaKnown RBP20.65■□□□□ 0.9
SEMA3B-205ENST00000434030 ALOXE3Q9BYJ1 711 aa20.65■□□□□ 0.9
SEMA3B-205ENST00000434030 TRIM45Q9H8W5 580 aaPredicted RBP20.65■□□□□ 0.9
SEMA3B-205ENST00000434030 DMRT3Q9NQL9 472 aa20.65■□□□□ 0.9
SEMA3B-205ENST00000434030 VTI1BQ9UEU0 232 aa20.65■□□□□ 0.9
SEMA3B-205ENST00000434030 NFU1Q9UMS0 254 aa20.65■□□□□ 0.9
SEMA3B-205ENST00000434030 DOPEY1Q5JWR5 2465 aa20.64■□□□□ 0.9
SEMA3B-205ENST00000434030 SYNDIG1LA6NDD5 238 aa20.64■□□□□ 0.89
SEMA3B-205ENST00000434030 TRIM49D1C9J1S8 452 aa20.64■□□□□ 0.89
SEMA3B-205ENST00000434030 H0YIV9 168 aa20.64■□□□□ 0.89
SEMA3B-205ENST00000434030 FCHO1O14526 889 aa20.64■□□□□ 0.89
SEMA3B-205ENST00000434030 LDB3O75112 727 aa20.64■□□□□ 0.89
SEMA3B-205ENST00000434030 UNC5CO95185 931 aa20.64■□□□□ 0.89
SEMA3B-205ENST00000434030 CLDN1O95832 211 aa20.64■□□□□ 0.89
SEMA3B-205ENST00000434030 CNTFP26441 200 aa20.64■□□□□ 0.89
SEMA3B-205ENST00000434030 TRHRP34981 398 aaPredicted RBP20.64■□□□□ 0.89
SEMA3B-205ENST00000434030 SSR2P43308 183 aa20.64■□□□□ 0.89
SEMA3B-205ENST00000434030 STX4Q12846 297 aa20.64■□□□□ 0.89
SEMA3B-205ENST00000434030 ELAVL1Q15717 326 aaKnown RBP20.64■□□□□ 0.89
SEMA3B-205ENST00000434030 ZNF227Q86WZ6 799 aa20.64■□□□□ 0.89
SEMA3B-205ENST00000434030 TMEM132CQ8N3T6 1108 aa20.64■□□□□ 0.89
SEMA3B-205ENST00000434030 L3MBTL4Q8NA19 623 aa20.64■□□□□ 0.89
SEMA3B-205ENST00000434030 RGMAQ96B86 450 aa20.64■□□□□ 0.89
SEMA3B-205ENST00000434030 PHF21BQ96EK2 531 aa20.64■□□□□ 0.89
SEMA3B-205ENST00000434030 SORBS1Q9BX66 1292 aaKnown RBP20.64■□□□□ 0.89
SEMA3B-205ENST00000434030 SEC14L3Q9UDX4 400 aa20.64■□□□□ 0.89
SEMA3B-205ENST00000434030 FBXW2Q9UKT8 454 aa20.64■□□□□ 0.89
SEMA3B-205ENST00000434030 RNF11Q9Y3C5 154 aa20.64■□□□□ 0.89
SEMA3B-205ENST00000434030 NAV2Q8IVL1 2488 aa20.63■□□□□ 0.89
SEMA3B-205ENST00000434030 ASPDHA6ND91 283 aa20.63■□□□□ 0.89
SEMA3B-205ENST00000434030 IFNA16P05015 189 aa20.63■□□□□ 0.89
SEMA3B-205ENST00000434030 COL6A2P12110 1019 aa20.63■□□□□ 0.89
SEMA3B-205ENST00000434030 CPN2P22792 545 aa20.63■□□□□ 0.89
SEMA3B-205ENST00000434030 PIK3CGP48736 1102 aa20.63■□□□□ 0.89
SEMA3B-205ENST00000434030 HLCSP50747 726 aa20.63■□□□□ 0.89
SEMA3B-205ENST00000434030 RPS13P62277 151 aaKnown RBP20.63■□□□□ 0.89
SEMA3B-205ENST00000434030 SLAMF1Q13291 335 aa20.63■□□□□ 0.89
SEMA3B-205ENST00000434030 CPSF6Q16630 551 aaKnown RBP eCLIP20.63■□□□□ 0.89
SEMA3B-205ENST00000434030 MAPKAPK3Q16644 382 aa20.63■□□□□ 0.89
SEMA3B-205ENST00000434030 TSNAXIP1Q2TAA8 658 aa20.63■□□□□ 0.89
SEMA3B-205ENST00000434030 PTGR2Q8N8N7 351 aaPredicted RBP20.63■□□□□ 0.89
SEMA3B-205ENST00000434030 SCYL1Q96KG9 808 aa20.63■□□□□ 0.89
SEMA3B-205ENST00000434030 CLCA3PQ9Y6N3 262 aa20.63■□□□□ 0.89
SEMA3B-205ENST00000434030 SPACA6W5XKT8 324 aa20.63■□□□□ 0.89
SEMA3B-205ENST00000434030 A0A1B0GUH1 482 aa20.62■□□□□ 0.89
SEMA3B-205ENST00000434030 PLPP1O14494 284 aa20.62■□□□□ 0.89
SEMA3B-205ENST00000434030 OR7A17O14581 309 aa20.62■□□□□ 0.89
SEMA3B-205ENST00000434030 PRKNO60260 465 aaPredicted RBP20.62■□□□□ 0.89
SEMA3B-205ENST00000434030 SLC25A12O75746 678 aa20.62■□□□□ 0.89
SEMA3B-205ENST00000434030 PTX3P26022 381 aaPredicted RBP20.62■□□□□ 0.89
SEMA3B-205ENST00000434030 RAP1GDS1P52306 607 aa20.62■□□□□ 0.89
SEMA3B-205ENST00000434030 SERTAD2Q14140 314 aa20.62■□□□□ 0.89
SEMA3B-205ENST00000434030 C1QL3Q5VWW1 255 aa20.62■□□□□ 0.89
SEMA3B-205ENST00000434030 MAMDC2Q7Z304 686 aaPredicted RBP20.62■□□□□ 0.89
SEMA3B-205ENST00000434030 PNPLA5Q7Z6Z6 429 aaPredicted RBP20.62■□□□□ 0.89
SEMA3B-205ENST00000434030 FJX1Q86VR8 437 aa20.62■□□□□ 0.89
SEMA3B-205ENST00000434030 IFT20Q8IY31 132 aa20.62■□□□□ 0.89
SEMA3B-205ENST00000434030 WDR20Q8TBZ3 569 aa20.62■□□□□ 0.89
SEMA3B-205ENST00000434030 PTPMT1Q8WUK0 201 aaPredicted RBP20.62■□□□□ 0.89
SEMA3B-205ENST00000434030 DAZLQ92904 295 aaKnown RBP20.62■□□□□ 0.89
SEMA3B-205ENST00000434030 ANKRD9Q96BM1 317 aaPredicted RBP20.62■□□□□ 0.89
SEMA3B-205ENST00000434030 REPS1Q96D71 796 aa20.62■□□□□ 0.89
SEMA3B-205ENST00000434030 CCDC77Q9BR77 488 aa20.62■□□□□ 0.89
SEMA3B-205ENST00000434030 CENPKQ9BS16 269 aa20.62■□□□□ 0.89
SEMA3B-205ENST00000434030 NOL11Q9H8H0 719 aaKnown RBP20.62■□□□□ 0.89
SEMA3B-205ENST00000434030 XPR1Q9UBH6 696 aa20.62■□□□□ 0.89
SEMA3B-205ENST00000434030 TMCO1Q9UM00 188 aa20.62■□□□□ 0.89
SEMA3B-205ENST00000434030 EXOC1LA0A1B0GW35 172 aa20.61■□□□□ 0.89
SEMA3B-205ENST00000434030 STX16-NPEPL1H3BU86 382 aa20.61■□□□□ 0.89
SEMA3B-205ENST00000434030 STX16O14662 325 aa20.61■□□□□ 0.89
SEMA3B-205ENST00000434030 NME2P1O60361 137 aa20.61■□□□□ 0.89
SEMA3B-205ENST00000434030 ITGA10O75578 1167 aa20.61■□□□□ 0.89
SEMA3B-205ENST00000434030 ZFAND5O76080 213 aa20.61■□□□□ 0.89
SEMA3B-205ENST00000434030 SNRPAP09012 282 aaKnown RBP20.61■□□□□ 0.89
SEMA3B-205ENST00000434030 NME2P22392 152 aa20.61■□□□□ 0.89
SEMA3B-205ENST00000434030 GCAP28676 217 aa20.61■□□□□ 0.89
SEMA3B-205ENST00000434030 ARFIP1P53367 373 aa20.61■□□□□ 0.89
SEMA3B-205ENST00000434030 PER3P56645 1201 aa20.61■□□□□ 0.89
SEMA3B-205ENST00000434030 PHEXP78562 749 aa20.61■□□□□ 0.89
SEMA3B-205ENST00000434030 ALDH6A1Q02252 535 aaKnown RBP20.61■□□□□ 0.89
SEMA3B-205ENST00000434030 ID2Q02363 134 aa20.61■□□□□ 0.89
SEMA3B-205ENST00000434030 FAM98AQ8NCA5 519 aaKnown RBP20.61■□□□□ 0.89
SEMA3B-205ENST00000434030 MORN4Q8NDC4 146 aa20.61■□□□□ 0.89
SEMA3B-205ENST00000434030 OR52B6Q8NGF0 335 aa20.61■□□□□ 0.89
SEMA3B-205ENST00000434030 RELTQ969Z4 430 aa20.61■□□□□ 0.89
SEMA3B-205ENST00000434030 ATP6V1E2Q96A05 226 aa20.61■□□□□ 0.89
SEMA3B-205ENST00000434030 FRMD6Q96NE9 622 aa20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms