RNA–Protein interactions for RNA: ENST00000430858.1

HDAC6-207, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 618 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-207ENST00000430858 SERPINI1Q99574 410 aa9.18□□□□□ -0.94
HDAC6-207ENST00000430858 MAPKAP1Q9BPZ7 522 aa9.18□□□□□ -0.94
HDAC6-207ENST00000430858 UTP23Q9BRU9 249 aaKnown RBP9.18□□□□□ -0.94
HDAC6-207ENST00000430858 ERVK-6Q9BXR3 956 aa9.18□□□□□ -0.94
HDAC6-207ENST00000430858 CDCP1Q9H5V8 836 aa9.18□□□□□ -0.94
HDAC6-207ENST00000430858 ANKZF1Q9H8Y5 726 aa9.18□□□□□ -0.94
HDAC6-207ENST00000430858 ADAP2Q9NPF8 381 aa9.18□□□□□ -0.94
HDAC6-207ENST00000430858 SEMA4BQ9NPR2 832 aaPredicted RBP9.18□□□□□ -0.94
HDAC6-207ENST00000430858 PNO1Q9NRX1 252 aaKnown RBP9.18□□□□□ -0.94
HDAC6-207ENST00000430858 PHF11Q9UIL8 331 aa9.18□□□□□ -0.94
HDAC6-207ENST00000430858 FBXW2Q9UKT8 454 aa9.18□□□□□ -0.94
HDAC6-207ENST00000430858 PPIEQ9UNP9 301 aaKnown RBP9.18□□□□□ -0.94
HDAC6-207ENST00000430858 NTNG1Q9Y2I2 539 aa9.18□□□□□ -0.94
HDAC6-207ENST00000430858 CLEC18AA5D8T8 446 aa9.17□□□□□ -0.94
HDAC6-207ENST00000430858 GABRR3A8MPY1 467 aa9.17□□□□□ -0.94
HDAC6-207ENST00000430858 TGFBR3LH3BV60 316 aa9.17□□□□□ -0.94
HDAC6-207ENST00000430858 DLX3O60479 287 aa9.17□□□□□ -0.94
HDAC6-207ENST00000430858 GLRA3O75311 464 aa9.17□□□□□ -0.94
HDAC6-207ENST00000430858 SUPT7LO94864 414 aa9.17□□□□□ -0.94
HDAC6-207ENST00000430858 SEMA3DO95025 777 aa9.17□□□□□ -0.94
HDAC6-207ENST00000430858 RASAL1O95294 804 aa9.17□□□□□ -0.94
HDAC6-207ENST00000430858 CBX6O95503 412 aa9.17□□□□□ -0.94
HDAC6-207ENST00000430858 F10P00742 488 aa9.17□□□□□ -0.94
HDAC6-207ENST00000430858 IFNA16P05015 189 aa9.17□□□□□ -0.94
HDAC6-207ENST00000430858 ATP5F1P24539 256 aaPredicted RBP9.17□□□□□ -0.94
HDAC6-207ENST00000430858 PPP2R1BP30154 601 aa9.17□□□□□ -0.94
HDAC6-207ENST00000430858 TLX1P31314 330 aaPredicted RBP9.17□□□□□ -0.94
HDAC6-207ENST00000430858 BSGP35613 385 aa9.17□□□□□ -0.94
HDAC6-207ENST00000430858 HSD17B3P37058 310 aa9.17□□□□□ -0.94
HDAC6-207ENST00000430858 BUD31P41223 144 aaPredicted RBP9.17□□□□□ -0.94
HDAC6-207ENST00000430858 CDH13P55290 713 aa9.17□□□□□ -0.94
HDAC6-207ENST00000430858 CLCQ05315 142 aa9.17□□□□□ -0.94
HDAC6-207ENST00000430858 BIKQ13323 160 aa9.17□□□□□ -0.94
HDAC6-207ENST00000430858 TUBA3CQ13748 450 aa9.17□□□□□ -0.94
HDAC6-207ENST00000430858 UBAP2LQ14157 1087 aaKnown RBP9.17□□□□□ -0.94
HDAC6-207ENST00000430858 NR6A1Q15406 480 aa9.17□□□□□ -0.94
HDAC6-207ENST00000430858 ELAVL1Q15717 326 aaKnown RBP9.17□□□□□ -0.94
HDAC6-207ENST00000430858 ZNF678Q5SXM1 525 aa9.17□□□□□ -0.94
HDAC6-207ENST00000430858 FHL5Q5TD97 284 aa9.17□□□□□ -0.94
HDAC6-207ENST00000430858 TUBA3EQ6PEY2 450 aa9.17□□□□□ -0.94
HDAC6-207ENST00000430858 CLEC18BQ6UXF7 455 aa9.17□□□□□ -0.94
HDAC6-207ENST00000430858 CLNKQ7Z7G1 428 aa9.17□□□□□ -0.94
HDAC6-207ENST00000430858 GPR180Q86V85 440 aa9.17□□□□□ -0.94
HDAC6-207ENST00000430858 RPS19BP1Q86WX3 136 aaKnown RBP9.17□□□□□ -0.94
HDAC6-207ENST00000430858 ARMC10Q8N2F6 343 aa9.17□□□□□ -0.94
HDAC6-207ENST00000430858 TMEM132CQ8N3T6 1108 aa9.17□□□□□ -0.94
HDAC6-207ENST00000430858 KIF2BQ8N4N8 673 aa9.17□□□□□ -0.94
HDAC6-207ENST00000430858 HORMAD2Q8N7B1 307 aa9.17□□□□□ -0.94
HDAC6-207ENST00000430858 CLEC18CQ8NCF0 446 aa9.17□□□□□ -0.94
HDAC6-207ENST00000430858 DAZLQ92904 295 aaKnown RBP9.17□□□□□ -0.94
HDAC6-207ENST00000430858 VMP1Q96GC9 406 aa9.17□□□□□ -0.94
HDAC6-207ENST00000430858 NPAS2Q99743 824 aa9.17□□□□□ -0.94
HDAC6-207ENST00000430858 SORBS1Q9BX66 1292 aaKnown RBP9.17□□□□□ -0.94
HDAC6-207ENST00000430858 ZNF717Q9BY31 904 aaPredicted RBP9.17□□□□□ -0.94
HDAC6-207ENST00000430858 ALOXE3Q9BYJ1 711 aa9.17□□□□□ -0.94
HDAC6-207ENST00000430858 DEFB126Q9BYW3 111 aa9.17□□□□□ -0.94
HDAC6-207ENST00000430858 ELOVL6Q9H5J4 265 aa9.17□□□□□ -0.94
HDAC6-207ENST00000430858 RPF2Q9H7B2 306 aaKnown RBP9.17□□□□□ -0.94
HDAC6-207ENST00000430858 DDX31Q9H8H2 851 aaKnown RBP9.17□□□□□ -0.94
HDAC6-207ENST00000430858 LYARQ9NX58 379 aaKnown RBP9.17□□□□□ -0.94
HDAC6-207ENST00000430858 VTI1BQ9UEU0 232 aa9.17□□□□□ -0.94
HDAC6-207ENST00000430858 TRPS1Q9UHF7 1281 aa9.17□□□□□ -0.94
HDAC6-207ENST00000430858 SNX6Q9UNH7 406 aa9.17□□□□□ -0.94
HDAC6-207ENST00000430858 PCDHGB6Q9Y5F9 930 aa9.17□□□□□ -0.94
HDAC6-207ENST00000430858 CLCA3PQ9Y6N3 262 aa9.17□□□□□ -0.94
HDAC6-207ENST00000430858 A0A0A6YYD5 115 aa9.16□□□□□ -0.94
HDAC6-207ENST00000430858 TRBV11-1A0A0K0K1C0 115 aa9.16□□□□□ -0.94
HDAC6-207ENST00000430858 A0A1W2PPM1 405 aa9.16□□□□□ -0.94
HDAC6-207ENST00000430858 ANKUB1A6NFN9 424 aa9.16□□□□□ -0.94
HDAC6-207ENST00000430858 FCHO1O14526 889 aa9.16□□□□□ -0.94
HDAC6-207ENST00000430858 MAN1A2O60476 641 aa9.16□□□□□ -0.94
HDAC6-207ENST00000430858 LDB3O75112 727 aa9.16□□□□□ -0.94
HDAC6-207ENST00000430858 CDH16O75309 829 aa9.16□□□□□ -0.94
HDAC6-207ENST00000430858 SLU7O95391 586 aaKnown RBP9.16□□□□□ -0.94
HDAC6-207ENST00000430858 ETHE1O95571 254 aa9.16□□□□□ -0.94
HDAC6-207ENST00000430858 MLYCDO95822 493 aa9.16□□□□□ -0.94
HDAC6-207ENST00000430858 CRYABP02511 175 aaKnown RBP9.16□□□□□ -0.94
HDAC6-207ENST00000430858 FAM58BPP0C7Q3 252 aa9.16□□□□□ -0.94
HDAC6-207ENST00000430858 KRT15P19012 456 aa9.16□□□□□ -0.94
HDAC6-207ENST00000430858 IMPDH1P20839 514 aa9.16□□□□□ -0.94
HDAC6-207ENST00000430858 CD96P40200 585 aa9.16□□□□□ -0.94
HDAC6-207ENST00000430858 SLCO1A2P46721 670 aa9.16□□□□□ -0.94
HDAC6-207ENST00000430858 CCT5P48643 541 aa9.16□□□□□ -0.94
HDAC6-207ENST00000430858 GPR143P51810 404 aa9.16□□□□□ -0.94
HDAC6-207ENST00000430858 PRKAA2P54646 552 aa9.16□□□□□ -0.94
HDAC6-207ENST00000430858 HNRNPH2P55795 449 aaKnown RBP9.16□□□□□ -0.94
HDAC6-207ENST00000430858 MLF1P58340 268 aa9.16□□□□□ -0.94
HDAC6-207ENST00000430858 TNFRSF17Q02223 184 aa9.16□□□□□ -0.94
HDAC6-207ENST00000430858 OC90Q02509 493 aaPredicted RBP9.16□□□□□ -0.94
HDAC6-207ENST00000430858 MRPL49Q13405 166 aaKnown RBP9.16□□□□□ -0.94
HDAC6-207ENST00000430858 ELOAQ14241 798 aaKnown RBP9.16□□□□□ -0.94
HDAC6-207ENST00000430858 OR1C1Q15619 314 aa9.16□□□□□ -0.94
HDAC6-207ENST00000430858 UNC50Q53HI1 259 aa9.16□□□□□ -0.94
HDAC6-207ENST00000430858 ZNF766Q5HY98 468 aa9.16□□□□□ -0.94
HDAC6-207ENST00000430858 MRM1Q6IN84 353 aaKnown RBP9.16□□□□□ -0.94
HDAC6-207ENST00000430858 LETMD1Q6P1Q0 360 aa9.16□□□□□ -0.94
HDAC6-207ENST00000430858 CYP20A1Q6UW02 462 aa9.16□□□□□ -0.94
HDAC6-207ENST00000430858 SH2D5Q6ZV89 423 aa9.16□□□□□ -0.94
HDAC6-207ENST00000430858 RPS27LQ71UM5 84 aaKnown RBP9.16□□□□□ -0.94
HDAC6-207ENST00000430858 NUDT13Q86X67 352 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms