RNA–Protein interactions for RNA: ENST00000429662.6

GABPB1-205, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,392 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-205ENST00000429662 IMPAD1Q9NX62 359 aa8.33□□□□□ -1.08
GABPB1-205ENST00000429662 SPG21Q9NZD8 308 aa8.33□□□□□ -1.08
GABPB1-205ENST00000429662 NDUFAF4Q9P032 175 aa8.33□□□□□ -1.08
GABPB1-205ENST00000429662 CRNNQ9UBG3 495 aaPredicted RBP8.33□□□□□ -1.08
GABPB1-205ENST00000429662 DKK3Q9UBP4 350 aa8.33□□□□□ -1.08
GABPB1-205ENST00000429662 TMPRSS11EQ9UL52 423 aa8.33□□□□□ -1.08
GABPB1-205ENST00000429662 PCDHGA2Q9Y5H1 932 aa8.33□□□□□ -1.08
GABPB1-205ENST00000429662 PMF1-BGLAPU3KQ54 211 aa8.33□□□□□ -1.08
GABPB1-205ENST00000429662 NAV2Q8IVL1 2488 aa8.33□□□□□ -1.08
GABPB1-205ENST00000429662 A0A075B6Q4 140 aa8.32□□□□□ -1.08
GABPB1-205ENST00000429662 GNG14A0A1W2PPG7 69 aa8.32□□□□□ -1.08
GABPB1-205ENST00000429662 M0R082 166 aa8.32□□□□□ -1.08
GABPB1-205ENST00000429662 LEFTY2O00292 366 aa8.32□□□□□ -1.08
GABPB1-205ENST00000429662 DIRAS1O95057 198 aa8.32□□□□□ -1.08
GABPB1-205ENST00000429662 CCNB2O95067 398 aa8.32□□□□□ -1.08
GABPB1-205ENST00000429662 LRG1P02750 347 aa8.32□□□□□ -1.08
GABPB1-205ENST00000429662 LCKP06239 509 aa8.32□□□□□ -1.08
GABPB1-205ENST00000429662 PABPC1P11940 636 aaKnown RBP8.32□□□□□ -1.08
GABPB1-205ENST00000429662 GABRB1P18505 474 aa8.32□□□□□ -1.08
GABPB1-205ENST00000429662 RHCEP18577 417 aa8.32□□□□□ -1.08
GABPB1-205ENST00000429662 CD22P20273 847 aa8.32□□□□□ -1.08
GABPB1-205ENST00000429662 XPAP23025 273 aaPredicted RBP8.32□□□□□ -1.08
GABPB1-205ENST00000429662 FSHRP23945 695 aa8.32□□□□□ -1.08
GABPB1-205ENST00000429662 NNMTP40261 264 aa8.32□□□□□ -1.08
GABPB1-205ENST00000429662 CRATP43155 626 aa8.32□□□□□ -1.08
GABPB1-205ENST00000429662 GSTM5P46439 218 aa8.32□□□□□ -1.08
GABPB1-205ENST00000429662 SMIM11AP58511 58 aa8.32□□□□□ -1.08
GABPB1-205ENST00000429662 COPZ1P61923 177 aa8.32□□□□□ -1.08
GABPB1-205ENST00000429662 RAE1P78406 368 aaKnown RBP8.32□□□□□ -1.08
GABPB1-205ENST00000429662 IFITM3Q01628 133 aa8.32□□□□□ -1.08
GABPB1-205ENST00000429662 SPIBQ01892 262 aa8.32□□□□□ -1.08
GABPB1-205ENST00000429662 SMN1Q16637 294 aaKnown RBP8.32□□□□□ -1.08
GABPB1-205ENST00000429662 NDUFA5Q16718 116 aa8.32□□□□□ -1.08
GABPB1-205ENST00000429662 HENMT1Q5T8I9 393 aaKnown RBP8.32□□□□□ -1.08
GABPB1-205ENST00000429662 MEDAGQ5VYS4 303 aa8.32□□□□□ -1.08
GABPB1-205ENST00000429662 TMEM236Q5W0B7 351 aa8.32□□□□□ -1.08
GABPB1-205ENST00000429662 DPY19L3Q6ZPD9 716 aa8.32□□□□□ -1.08
GABPB1-205ENST00000429662 SLCO4C1Q6ZQN7 724 aa8.32□□□□□ -1.08
GABPB1-205ENST00000429662 DPPA4Q7L190 304 aa8.32□□□□□ -1.08
GABPB1-205ENST00000429662 ZBTB46Q86UZ6 589 aa8.32□□□□□ -1.08
GABPB1-205ENST00000429662 FAM124AQ86V42 546 aa8.32□□□□□ -1.08
GABPB1-205ENST00000429662 SLC22A16Q86VW1 577 aa8.32□□□□□ -1.08
GABPB1-205ENST00000429662 KRT73Q86Y46 540 aa8.32□□□□□ -1.08
GABPB1-205ENST00000429662 CCDC71Q8IV32 467 aaPredicted RBP8.32□□□□□ -1.08
GABPB1-205ENST00000429662 LYSMD2Q8IV50 215 aa8.32□□□□□ -1.08
GABPB1-205ENST00000429662 LAS2Q8IYD9 372 aa8.32□□□□□ -1.08
GABPB1-205ENST00000429662 SLC22A15Q8IZD6 547 aa8.32□□□□□ -1.08
GABPB1-205ENST00000429662 CADM3Q8N126 398 aa8.32□□□□□ -1.08
GABPB1-205ENST00000429662 NAGSQ8N159 534 aa8.32□□□□□ -1.08
GABPB1-205ENST00000429662 FLCNQ8NFG4 579 aa8.32□□□□□ -1.08
GABPB1-205ENST00000429662 HUS1BQ8NHY5 278 aa8.32□□□□□ -1.08
GABPB1-205ENST00000429662 SETD7Q8WTS6 366 aaKnown RBP8.32□□□□□ -1.08
GABPB1-205ENST00000429662 PROX1Q92786 737 aa8.32□□□□□ -1.08
GABPB1-205ENST00000429662 VOPP1Q96AW1 172 aa8.32□□□□□ -1.08
GABPB1-205ENST00000429662 PPCDCQ96CD2 204 aa8.32□□□□□ -1.08
GABPB1-205ENST00000429662 TXNDC15Q96J42 360 aa8.32□□□□□ -1.08
GABPB1-205ENST00000429662 KCNC2Q96PR1 638 aa8.32□□□□□ -1.08
GABPB1-205ENST00000429662 MTERF1Q99551 399 aaKnown RBP8.32□□□□□ -1.08
GABPB1-205ENST00000429662 FEVQ99581 238 aa8.32□□□□□ -1.08
GABPB1-205ENST00000429662 DPH2Q9BQC3 489 aaPredicted RBP8.32□□□□□ -1.08
GABPB1-205ENST00000429662 BBS2Q9BXC9 721 aa8.32□□□□□ -1.08
GABPB1-205ENST00000429662 ZCCHC2Q9C0B9 1178 aaKnown RBP8.32□□□□□ -1.08
GABPB1-205ENST00000429662 ARMC7Q9H6L4 198 aa8.32□□□□□ -1.08
GABPB1-205ENST00000429662 ITM2CQ9NQX7 267 aa8.32□□□□□ -1.08
GABPB1-205ENST00000429662 AHSPQ9NZD4 102 aa8.32□□□□□ -1.08
GABPB1-205ENST00000429662 NPAP1Q9NZP6 1156 aa8.32□□□□□ -1.08
GABPB1-205ENST00000429662 SH3BP4Q9P0V3 963 aa8.32□□□□□ -1.08
GABPB1-205ENST00000429662 ZNF229Q9UJW7 825 aa8.32□□□□□ -1.08
GABPB1-205ENST00000429662 DUSP12Q9UNI6 340 aa8.32□□□□□ -1.08
GABPB1-205ENST00000429662 CFL2Q9Y281 166 aa8.32□□□□□ -1.08
GABPB1-205ENST00000429662 ZNF451Q9Y4E5 1061 aa8.32□□□□□ -1.08
GABPB1-205ENST00000429662 PCDHGA3Q9Y5H0 932 aa8.32□□□□□ -1.08
GABPB1-205ENST00000429662 SCN8AQ9UQD0 1980 aa8.31□□□□□ -1.08
GABPB1-205ENST00000429662 TENM4Q6N022 2769 aa8.31□□□□□ -1.08
GABPB1-205ENST00000429662 DCDC2BA2VCK2 349 aa8.31□□□□□ -1.08
GABPB1-205ENST00000429662 FADS2P1A8MWK0 482 aa8.31□□□□□ -1.08
GABPB1-205ENST00000429662 UPK3BL1B0FP48 263 aa8.31□□□□□ -1.08
GABPB1-205ENST00000429662 UPK3BL2E5RIL1 263 aa8.31□□□□□ -1.08
GABPB1-205ENST00000429662 HAT1O14929 419 aa8.31□□□□□ -1.08
GABPB1-205ENST00000429662 MAN1A2O60476 641 aa8.31□□□□□ -1.08
GABPB1-205ENST00000429662 TBX19O60806 448 aa8.31□□□□□ -1.08
GABPB1-205ENST00000429662 PDE9AO76083 593 aa8.31□□□□□ -1.08
GABPB1-205ENST00000429662 OXSR1O95747 527 aaPredicted RBP8.31□□□□□ -1.08
GABPB1-205ENST00000429662 B3GALT4O96024 378 aa8.31□□□□□ -1.08
GABPB1-205ENST00000429662 SP9P0CG40 484 aa8.31□□□□□ -1.08
GABPB1-205ENST00000429662 C1GALT1C1LP0DN25 315 aa8.31□□□□□ -1.08
GABPB1-205ENST00000429662 GLULP15104 373 aa8.31□□□□□ -1.08
GABPB1-205ENST00000429662 UQCRC2P22695 453 aa8.31□□□□□ -1.08
GABPB1-205ENST00000429662 PPM1AP35813 382 aa8.31□□□□□ -1.08
GABPB1-205ENST00000429662 LIPAP38571 399 aa8.31□□□□□ -1.08
GABPB1-205ENST00000429662 XCR1P46094 333 aa8.31□□□□□ -1.08
GABPB1-205ENST00000429662 RGS6P49758 472 aa8.31□□□□□ -1.08
GABPB1-205ENST00000429662 MMP16P51512 607 aa8.31□□□□□ -1.08
GABPB1-205ENST00000429662 UGT2B15P54855 530 aa8.31□□□□□ -1.08
GABPB1-205ENST00000429662 ZXDBP98169 803 aa8.31□□□□□ -1.08
GABPB1-205ENST00000429662 CDK6Q00534 326 aa8.31□□□□□ -1.08
GABPB1-205ENST00000429662 DDX39BQ13838 428 aaKnown RBP8.31□□□□□ -1.08
GABPB1-205ENST00000429662 INAVAQ3KP66 663 aa8.31□□□□□ -1.08
GABPB1-205ENST00000429662 BCL7AQ4VC05 210 aa8.31□□□□□ -1.08
GABPB1-205ENST00000429662 CCDC92Q53HC0 331 aaPredicted RBP8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms