RNA–Protein interactions for RNA: ENST00000428728.5

TRIM39-209, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 1,013 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-209ENST00000428728 PPT2Q9UMR5 302 aa15.89■□□□□ 0.13
TRIM39-209ENST00000428728 YARS2Q9Y2Z4 477 aaKnown RBP15.89■□□□□ 0.13
TRIM39-209ENST00000428728 NCKAP5O14513 1909 aa15.89■□□□□ 0.13
TRIM39-209ENST00000428728 A0A1B0GTH9 108 aa15.88■□□□□ 0.13
TRIM39-209ENST00000428728 UBXN8O00124 270 aa15.88■□□□□ 0.13
TRIM39-209ENST00000428728 WWP2O00308 870 aa15.88■□□□□ 0.13
TRIM39-209ENST00000428728 TUBB4AP04350 444 aa15.88■□□□□ 0.13
TRIM39-209ENST00000428728 GSTA2P09210 222 aa15.88■□□□□ 0.13
TRIM39-209ENST00000428728 SLC35E2BP0CK96 405 aa15.88■□□□□ 0.13
TRIM39-209ENST00000428728 SOX3P41225 446 aa15.88■□□□□ 0.13
TRIM39-209ENST00000428728 KCNC1P48547 511 aa15.88■□□□□ 0.13
TRIM39-209ENST00000428728 ID2Q02363 134 aa15.88■□□□□ 0.13
TRIM39-209ENST00000428728 DLG1Q12959 904 aa15.88■□□□□ 0.13
TRIM39-209ENST00000428728 HIST2H2ACQ16777 129 aaPredicted RBP15.88■□□□□ 0.13
TRIM39-209ENST00000428728 CMPK2Q5EBM0 449 aa15.88■□□□□ 0.13
TRIM39-209ENST00000428728 GRTP1Q5TC63 336 aa15.88■□□□□ 0.13
TRIM39-209ENST00000428728 HIST2H2AA3Q6FI13 130 aa15.88■□□□□ 0.13
TRIM39-209ENST00000428728 IL20RBQ6UXL0 311 aa15.88■□□□□ 0.13
TRIM39-209ENST00000428728 TBC1D1Q86TI0 1168 aaPredicted RBP15.88■□□□□ 0.13
TRIM39-209ENST00000428728 ZNF321PQ8N8H1 164 aa15.88■□□□□ 0.13
TRIM39-209ENST00000428728 PSD4Q8NDX1 1056 aa15.88■□□□□ 0.13
TRIM39-209ENST00000428728 FBXO25Q8TCJ0 367 aa15.88■□□□□ 0.13
TRIM39-209ENST00000428728 KCNC2Q96PR1 638 aa15.88■□□□□ 0.13
TRIM39-209ENST00000428728 MAPKAP1Q9BPZ7 522 aa15.88■□□□□ 0.13
TRIM39-209ENST00000428728 ALOXE3Q9BYJ1 711 aa15.88■□□□□ 0.13
TRIM39-209ENST00000428728 CD244Q9BZW8 370 aa15.88■□□□□ 0.13
TRIM39-209ENST00000428728 OR8D2Q9GZM6 311 aa15.88■□□□□ 0.13
TRIM39-209ENST00000428728 PRDM7Q9NQW5 492 aa15.88■□□□□ 0.13
TRIM39-209ENST00000428728 UTP11Q9Y3A2 253 aaKnown RBP15.88■□□□□ 0.13
TRIM39-209ENST00000428728 TMEM200CA6NKL6 621 aa15.87■□□□□ 0.13
TRIM39-209ENST00000428728 E9PLN8 166 aa15.87■□□□□ 0.13
TRIM39-209ENST00000428728 SAP18O00422 153 aaKnown RBP15.87■□□□□ 0.13
TRIM39-209ENST00000428728 CTNSO60931 367 aa15.87■□□□□ 0.13
TRIM39-209ENST00000428728 PDE9AO76083 593 aa15.87■□□□□ 0.13
TRIM39-209ENST00000428728 OR6B1O95007 311 aa15.87■□□□□ 0.13
TRIM39-209ENST00000428728 TGFB1P01137 390 aa15.87■□□□□ 0.13
TRIM39-209ENST00000428728 ATP5A1P25705 553 aaKnown RBP15.87■□□□□ 0.13
TRIM39-209ENST00000428728 STX2P32856 288 aa15.87■□□□□ 0.13
TRIM39-209ENST00000428728 PTGS2P35354 604 aa15.87■□□□□ 0.13
TRIM39-209ENST00000428728 SSR2P43308 183 aa15.87■□□□□ 0.13
TRIM39-209ENST00000428728 HK2P52789 917 aa15.87■□□□□ 0.13
TRIM39-209ENST00000428728 DDX39BQ13838 428 aaKnown RBP15.87■□□□□ 0.13
TRIM39-209ENST00000428728 HSDL2Q6YN16 418 aa15.87■□□□□ 0.13
TRIM39-209ENST00000428728 UBE3DQ7Z6J8 389 aa15.87■□□□□ 0.13
TRIM39-209ENST00000428728 EID3Q8N140 333 aa15.87■□□□□ 0.13
TRIM39-209ENST00000428728 ACOT4Q8N9L9 421 aa15.87■□□□□ 0.13
TRIM39-209ENST00000428728 OR14A16Q8NHC5 309 aa15.87■□□□□ 0.13
TRIM39-209ENST00000428728 STAG3L4Q8TBR4 150 aa15.87■□□□□ 0.13
TRIM39-209ENST00000428728 FBF1Q8TES7 1133 aa15.87■□□□□ 0.13
TRIM39-209ENST00000428728 ZNF473Q8WTR7 871 aaKnown RBP15.87■□□□□ 0.13
TRIM39-209ENST00000428728 PHF10Q8WUB8 498 aaKnown RBP15.87■□□□□ 0.13
TRIM39-209ENST00000428728 DAZLQ92904 295 aaKnown RBP15.87■□□□□ 0.13
TRIM39-209ENST00000428728 SDCCAG3Q96C92 435 aa15.87■□□□□ 0.13
TRIM39-209ENST00000428728 RASL10BQ96S79 203 aa15.87■□□□□ 0.13
TRIM39-209ENST00000428728 DMRTA2Q96SC8 542 aa15.87■□□□□ 0.13
TRIM39-209ENST00000428728 VKORC1Q9BQB6 163 aa15.87■□□□□ 0.13
TRIM39-209ENST00000428728 TRIM8Q9BZR9 551 aa15.87■□□□□ 0.13
TRIM39-209ENST00000428728 NMRAL1Q9HBL8 299 aa15.87■□□□□ 0.13
TRIM39-209ENST00000428728 LYRM4Q9HD34 91 aa15.87■□□□□ 0.13
TRIM39-209ENST00000428728 DEPPQ9NTK1 212 aa15.87■□□□□ 0.13
TRIM39-209ENST00000428728 MYOTQ9UBF9 498 aa15.87■□□□□ 0.13
TRIM39-209ENST00000428728 OPTCQ9UBM4 332 aa15.87■□□□□ 0.13
TRIM39-209ENST00000428728 APCP25054 2843 aa15.86■□□□□ 0.13
TRIM39-209ENST00000428728 A0A0G2JMM0 328 aa15.86■□□□□ 0.13
TRIM39-209ENST00000428728 A0A1W2PPB8 328 aa15.86■□□□□ 0.13
TRIM39-209ENST00000428728 A0A1W2PRS3 328 aa15.86■□□□□ 0.13
TRIM39-209ENST00000428728 PINLYPA6NC86 204 aa15.86■□□□□ 0.13
TRIM39-209ENST00000428728 SYNDIG1LA6NDD5 238 aa15.86■□□□□ 0.13
TRIM39-209ENST00000428728 FAM166BA8MTA8 275 aa15.86■□□□□ 0.13
TRIM39-209ENST00000428728 KIR3DP1A8MWS1 328 aa15.86■□□□□ 0.13
TRIM39-209ENST00000428728 C17orf105B2RV13 164 aa15.86■□□□□ 0.13
TRIM39-209ENST00000428728 G3V3Y1 287 aa15.86■□□□□ 0.13
TRIM39-209ENST00000428728 ADAM10O14672 748 aa15.86■□□□□ 0.13
TRIM39-209ENST00000428728 KERAO60938 352 aa15.86■□□□□ 0.13
TRIM39-209ENST00000428728 TNNI3P19429 210 aa15.86■□□□□ 0.13
TRIM39-209ENST00000428728 MAGEA4P43358 317 aa15.86■□□□□ 0.13
TRIM39-209ENST00000428728 PLGLB1Q02325 96 aa15.86■□□□□ 0.13
TRIM39-209ENST00000428728 TRADDQ15628 312 aa15.86■□□□□ 0.13
TRIM39-209ENST00000428728 TBCCQ15814 346 aa15.86■□□□□ 0.13
TRIM39-209ENST00000428728 MED27Q6P2C8 311 aa15.86■□□□□ 0.13
TRIM39-209ENST00000428728 CYS1Q717R9 158 aa15.86■□□□□ 0.13
TRIM39-209ENST00000428728 ISCA2Q86U28 154 aa15.86■□□□□ 0.13
TRIM39-209ENST00000428728 C17orf53Q8N3J3 647 aaPredicted RBP15.86■□□□□ 0.13
TRIM39-209ENST00000428728 RNF175Q8N4F7 328 aa15.86■□□□□ 0.13
TRIM39-209ENST00000428728 ZFP62Q8NB50 900 aaPredicted RBP15.86■□□□□ 0.13
TRIM39-209ENST00000428728 SRFBP1Q8NEF9 429 aaKnown RBP15.86■□□□□ 0.13
TRIM39-209ENST00000428728 OR52N2Q8NGI0 321 aa15.86■□□□□ 0.13
TRIM39-209ENST00000428728 C16orf52Q8NHV5 167 aa15.86■□□□□ 0.13
TRIM39-209ENST00000428728 FAM57AQ8TBR7 257 aa15.86■□□□□ 0.13
TRIM39-209ENST00000428728 SLC2A12Q8TD20 617 aa15.86■□□□□ 0.13
TRIM39-209ENST00000428728 PTPMT1Q8WUK0 201 aaPredicted RBP15.86■□□□□ 0.13
TRIM39-209ENST00000428728 UBTD2Q8WUN7 234 aa15.86■□□□□ 0.13
TRIM39-209ENST00000428728 MRRFQ96E11 262 aaKnown RBP15.86■□□□□ 0.13
TRIM39-209ENST00000428728 ATOH8Q96SQ7 321 aa15.86■□□□□ 0.13
TRIM39-209ENST00000428728 TBCDQ9BTW9 1192 aa15.86■□□□□ 0.13
TRIM39-209ENST00000428728 SORBS1Q9BX66 1292 aaKnown RBP15.86■□□□□ 0.13
TRIM39-209ENST00000428728 PHACTR1Q9C0D0 580 aa15.86■□□□□ 0.13
TRIM39-209ENST00000428728 ROGDIQ9GZN7 287 aa15.86■□□□□ 0.13
TRIM39-209ENST00000428728 RAB17Q9H0T7 212 aa15.86■□□□□ 0.13
TRIM39-209ENST00000428728 IGSF5Q9NSI5 407 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms