RNA–Protein interactions for RNA: ENST00000428643.1

HMGA1P4-201, Transcript of high mobility group AT-hook 1 pseudogene 4, humanhuman

TSL 2 BASIC

Gene HMGA1P4, Length 334 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P4-201ENST00000428643 ACTN3Q08043 901 aaPredicted RBP7.47□□□□□ -1.21
HMGA1P4-201ENST00000428643 KLF10Q13118 480 aa7.47□□□□□ -1.21
HMGA1P4-201ENST00000428643 MAPRE2Q15555 327 aa7.47□□□□□ -1.21
HMGA1P4-201ENST00000428643 PGS1Q32NB8 556 aa7.47□□□□□ -1.21
HMGA1P4-201ENST00000428643 FAM174BQ3ZCQ3 159 aa7.47□□□□□ -1.21
HMGA1P4-201ENST00000428643 MINDY4Q4G0A6 757 aa7.47□□□□□ -1.21
HMGA1P4-201ENST00000428643 CPTPQ5TA50 214 aa7.47□□□□□ -1.21
HMGA1P4-201ENST00000428643 C18orf63Q68DL7 685 aa7.47□□□□□ -1.21
HMGA1P4-201ENST00000428643 OR52E8Q6IFG1 317 aa7.47□□□□□ -1.21
HMGA1P4-201ENST00000428643 MRM1Q6IN84 353 aaKnown RBP7.47□□□□□ -1.21
HMGA1P4-201ENST00000428643 FAM71E1Q6IPT2 247 aa7.47□□□□□ -1.21
HMGA1P4-201ENST00000428643 GK5Q6ZS86 529 aa7.47□□□□□ -1.21
HMGA1P4-201ENST00000428643 R3HCC1LQ7Z5L2 792 aaKnown RBP7.47□□□□□ -1.21
HMGA1P4-201ENST00000428643 SNX32Q86XE0 403 aa7.47□□□□□ -1.21
HMGA1P4-201ENST00000428643 TICAM1Q8IUC6 712 aa7.47□□□□□ -1.21
HMGA1P4-201ENST00000428643 PRSS58Q8IYP2 241 aa7.47□□□□□ -1.21
HMGA1P4-201ENST00000428643 CPSF7Q8N684 471 aaKnown RBP7.47□□□□□ -1.21
HMGA1P4-201ENST00000428643 SLC38A9Q8NBW4 561 aa7.47□□□□□ -1.21
HMGA1P4-201ENST00000428643 GALNT6Q8NCL4 622 aa7.47□□□□□ -1.21
HMGA1P4-201ENST00000428643 OR7A2PQ8NGA2 310 aa7.47□□□□□ -1.21
HMGA1P4-201ENST00000428643 OR51Q1Q8NH59 317 aa7.47□□□□□ -1.21
HMGA1P4-201ENST00000428643 EXOSC8Q96B26 276 aaKnown RBP7.47□□□□□ -1.21
HMGA1P4-201ENST00000428643 TBC1D20Q96BZ9 403 aa7.47□□□□□ -1.21
HMGA1P4-201ENST00000428643 TM4SF18Q96CE8 201 aa7.47□□□□□ -1.21
HMGA1P4-201ENST00000428643 KLHL29Q96CT2 875 aa7.47□□□□□ -1.21
HMGA1P4-201ENST00000428643 PEX11GQ96HA9 241 aa7.47□□□□□ -1.21
HMGA1P4-201ENST00000428643 TEX37Q96LM6 180 aa7.47□□□□□ -1.21
HMGA1P4-201ENST00000428643 PRPF18Q99633 342 aaKnown RBP7.47□□□□□ -1.21
HMGA1P4-201ENST00000428643 MYLK2Q9H1R3 596 aa7.47□□□□□ -1.21
HMGA1P4-201ENST00000428643 REEP4Q9H6H4 257 aa7.47□□□□□ -1.21
HMGA1P4-201ENST00000428643 CLK4Q9HAZ1 481 aaKnown RBP7.47□□□□□ -1.21
HMGA1P4-201ENST00000428643 GIMAP4Q9NUV9 329 aa7.47□□□□□ -1.21
HMGA1P4-201ENST00000428643 CCDC167Q9P0B6 97 aa7.47□□□□□ -1.21
HMGA1P4-201ENST00000428643 ZKSCAN7Q9P0L1 754 aaPredicted RBP7.47□□□□□ -1.21
HMGA1P4-201ENST00000428643 SH3BP4Q9P0V3 963 aa7.47□□□□□ -1.21
HMGA1P4-201ENST00000428643 C5AR2Q9P296 337 aa7.47□□□□□ -1.21
HMGA1P4-201ENST00000428643 IFT80Q9P2H3 777 aaPredicted RBP7.47□□□□□ -1.21
HMGA1P4-201ENST00000428643 CTSFQ9UBX1 484 aa7.47□□□□□ -1.21
HMGA1P4-201ENST00000428643 MAPRE3Q9UPY8 281 aa7.47□□□□□ -1.21
HMGA1P4-201ENST00000428643 MRPS33Q9Y291 106 aaKnown RBP7.47□□□□□ -1.21
HMGA1P4-201ENST00000428643 PCDHGA8Q9Y5G5 932 aa7.47□□□□□ -1.21
HMGA1P4-201ENST00000428643 PCDHGA3Q9Y5H0 932 aa7.47□□□□□ -1.21
HMGA1P4-201ENST00000428643 PCDHA9Q9Y5H5 950 aa7.47□□□□□ -1.21
HMGA1P4-201ENST00000428643 ADAMTS20P59510 1910 aa7.46□□□□□ -1.21
HMGA1P4-201ENST00000428643 TEX51A0A1B0GUA7 166 aa7.46□□□□□ -1.22
HMGA1P4-201ENST00000428643 C1orf226A1L170 272 aa7.46□□□□□ -1.22
HMGA1P4-201ENST00000428643 FAM227AF5H4B4 570 aa7.46□□□□□ -1.22
HMGA1P4-201ENST00000428643 ANGPT2O15123 496 aa7.46□□□□□ -1.22
HMGA1P4-201ENST00000428643 CFLARO15519 480 aa7.46□□□□□ -1.22
HMGA1P4-201ENST00000428643 PDPK1O15530 556 aa7.46□□□□□ -1.22
HMGA1P4-201ENST00000428643 PROM1O43490 865 aa7.46□□□□□ -1.22
HMGA1P4-201ENST00000428643 JRKO75564 520 aa7.46□□□□□ -1.22
HMGA1P4-201ENST00000428643 ERAL1O75616 437 aaKnown RBP7.46□□□□□ -1.22
HMGA1P4-201ENST00000428643 FHP07954 510 aa7.46□□□□□ -1.22
HMGA1P4-201ENST00000428643 SNRPB2P08579 225 aaKnown RBP7.46□□□□□ -1.22
HMGA1P4-201ENST00000428643 FURINP09958 794 aa7.46□□□□□ -1.22
HMGA1P4-201ENST00000428643 EFNA1P20827 205 aaPredicted RBP7.46□□□□□ -1.22
HMGA1P4-201ENST00000428643 PPP2R1BP30154 601 aa7.46□□□□□ -1.22
HMGA1P4-201ENST00000428643 ADSLP30566 484 aaPredicted RBP7.46□□□□□ -1.22
HMGA1P4-201ENST00000428643 NTSP30990 170 aa7.46□□□□□ -1.22
HMGA1P4-201ENST00000428643 KIR3DL1P43629 444 aa7.46□□□□□ -1.22
HMGA1P4-201ENST00000428643 MRPL19P49406 292 aaKnown RBP7.46□□□□□ -1.22
HMGA1P4-201ENST00000428643 DGKQP52824 942 aa7.46□□□□□ -1.22
HMGA1P4-201ENST00000428643 C21orf58P58505 322 aa7.46□□□□□ -1.22
HMGA1P4-201ENST00000428643 OCA2Q04671 838 aa7.46□□□□□ -1.22
HMGA1P4-201ENST00000428643 SLC13A2Q13183 592 aa7.46□□□□□ -1.22
HMGA1P4-201ENST00000428643 PDE7AQ13946 482 aa7.46□□□□□ -1.22
HMGA1P4-201ENST00000428643 RCAN2Q14206 197 aa7.46□□□□□ -1.22
HMGA1P4-201ENST00000428643 PUM1Q14671 1186 aaKnown RBP eCLIP7.46□□□□□ -1.22
HMGA1P4-201ENST00000428643 UGT8Q16880 541 aa7.46□□□□□ -1.22
HMGA1P4-201ENST00000428643 DPY19L1Q2PZI1 675 aa7.46□□□□□ -1.22
HMGA1P4-201ENST00000428643 SPANXN4Q5MJ08 99 aa7.46□□□□□ -1.22
HMGA1P4-201ENST00000428643 MLIPQ5VWP3 458 aa7.46□□□□□ -1.22
HMGA1P4-201ENST00000428643 SLC48A1Q6P1K1 146 aa7.46□□□□□ -1.22
HMGA1P4-201ENST00000428643 C6orf15Q6UXA7 325 aaPredicted RBP7.46□□□□□ -1.22
HMGA1P4-201ENST00000428643 DNAJC14Q6Y2X3 702 aaPredicted RBP7.46□□□□□ -1.22
HMGA1P4-201ENST00000428643 TRPM8Q7Z2W7 1104 aa7.46□□□□□ -1.22
HMGA1P4-201ENST00000428643 TREML1Q86YW5 311 aa7.46□□□□□ -1.22
HMGA1P4-201ENST00000428643 ZC3H7AQ8IWR0 971 aaKnown RBP7.46□□□□□ -1.22
HMGA1P4-201ENST00000428643 RIMKLAQ8IXN7 391 aa7.46□□□□□ -1.22
HMGA1P4-201ENST00000428643 SHISA5Q8N114 240 aa7.46□□□□□ -1.22
HMGA1P4-201ENST00000428643 FITM2Q8N6M3 262 aa7.46□□□□□ -1.22
HMGA1P4-201ENST00000428643 POU5F2Q8N7G0 328 aa7.46□□□□□ -1.22
HMGA1P4-201ENST00000428643 GLB1L3Q8NCI6 653 aaPredicted RBP7.46□□□□□ -1.22
HMGA1P4-201ENST00000428643 PUM2Q8TB72 1066 aaKnown RBP eCLIP7.46□□□□□ -1.22
HMGA1P4-201ENST00000428643 NUDT8Q8WV74 236 aa7.46□□□□□ -1.22
HMGA1P4-201ENST00000428643 FKBP10Q96AY3 582 aa7.46□□□□□ -1.22
HMGA1P4-201ENST00000428643 TESCQ96BS2 214 aa7.46□□□□□ -1.22
HMGA1P4-201ENST00000428643 NXPE2Q96DL1 559 aa7.46□□□□□ -1.22
HMGA1P4-201ENST00000428643 MTERF3Q96E29 417 aa7.46□□□□□ -1.22
HMGA1P4-201ENST00000428643 LRFN5Q96NI6 719 aa7.46□□□□□ -1.22
HMGA1P4-201ENST00000428643 OR1F2PQ96R84 312 aa7.46□□□□□ -1.22
HMGA1P4-201ENST00000428643 DPH2Q9BQC3 489 aaPredicted RBP7.46□□□□□ -1.22
HMGA1P4-201ENST00000428643 CHST8Q9H2A9 424 aa7.46□□□□□ -1.22
HMGA1P4-201ENST00000428643 CLMPQ9H6B4 373 aa7.46□□□□□ -1.22
HMGA1P4-201ENST00000428643 RPF2Q9H7B2 306 aaKnown RBP7.46□□□□□ -1.22
HMGA1P4-201ENST00000428643 MKKSQ9NPJ1 570 aaPredicted RBP7.46□□□□□ -1.22
HMGA1P4-201ENST00000428643 ATAD3AQ9NVI7 634 aa7.46□□□□□ -1.22
HMGA1P4-201ENST00000428643 C14orf105Q9NVL8 296 aa7.46□□□□□ -1.22
HMGA1P4-201ENST00000428643 WDR70Q9NW82 654 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms