RNA–Protein interactions for RNA: ENST00000428135.7

SNX13-203, Transcript of sorting nexin 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX13, Length 6,357 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-203ENST00000428135 CLSTN3Q9BQT9 956 aa9.34□□□□□ -0.91
SNX13-203ENST00000428135 SORBS1Q9BX66 1292 aaKnown RBP9.34□□□□□ -0.91
SNX13-203ENST00000428135 POLDIP3Q9BY77 421 aaKnown RBP9.34□□□□□ -0.91
SNX13-203ENST00000428135 CST11Q9H112 138 aa9.34□□□□□ -0.91
SNX13-203ENST00000428135 TOR3AQ9H497 397 aa9.34□□□□□ -0.91
SNX13-203ENST00000428135 ACTL8Q9H568 366 aa9.34□□□□□ -0.91
SNX13-203ENST00000428135 SOX17Q9H6I2 414 aaPredicted RBP9.34□□□□□ -0.91
SNX13-203ENST00000428135 THUMPD1Q9NXG2 353 aaKnown RBP9.34□□□□□ -0.91
SNX13-203ENST00000428135 GRIP1Q9Y3R0 1128 aa9.34□□□□□ -0.91
SNX13-203ENST00000428135 FAM155AB1AL88 458 aaPredicted RBP9.34□□□□□ -0.91
SNX13-203ENST00000428135 SCGB1D2O95969 90 aa9.34□□□□□ -0.91
SNX13-203ENST00000428135 TGFBR2P37173 567 aa9.34□□□□□ -0.91
SNX13-203ENST00000428135 FAM189BP81408 668 aa9.34□□□□□ -0.91
SNX13-203ENST00000428135 NPTX1Q15818 432 aa9.34□□□□□ -0.91
SNX13-203ENST00000428135 PDSS1Q5T2R2 415 aa9.34□□□□□ -0.91
SNX13-203ENST00000428135 PLET1Q6UQ28 207 aa9.34□□□□□ -0.91
SNX13-203ENST00000428135 PUM2Q8TB72 1066 aaKnown RBP eCLIP9.34□□□□□ -0.919e-8■■■■■ 43.2
SNX13-203ENST00000428135 ADAMTS19Q8TE59 1207 aa9.34□□□□□ -0.91
SNX13-203ENST00000428135 BIRC7Q96CA5 298 aa9.34□□□□□ -0.91
SNX13-203ENST00000428135 CCDC120Q96HB5 630 aa9.34□□□□□ -0.91
SNX13-203ENST00000428135 CAMK1GQ96NX5 476 aa9.34□□□□□ -0.91
SNX13-203ENST00000428135 OR51B6Q9H340 312 aa9.34□□□□□ -0.91
SNX13-203ENST00000428135 VRTNQ9H8Y1 702 aa9.34□□□□□ -0.91
SNX13-203ENST00000428135 MKLN1Q9UL63 735 aa9.34□□□□□ -0.91
SNX13-203ENST00000428135 RAB26Q9ULW5 256 aa9.34□□□□□ -0.91
SNX13-203ENST00000428135 YY2O15391 372 aa9.33□□□□□ -0.92
SNX13-203ENST00000428135 NAA10P41227 235 aaPredicted RBP9.33□□□□□ -0.92
SNX13-203ENST00000428135 SMAD2Q15796 467 aaKnown RBP9.33□□□□□ -0.92
SNX13-203ENST00000428135 ZNF789Q5FWF6 425 aa9.33□□□□□ -0.92
SNX13-203ENST00000428135 ARHGAP22Q7Z5H3 698 aa9.33□□□□□ -0.92
SNX13-203ENST00000428135 FOXJ1Q92949 421 aa9.33□□□□□ -0.92
SNX13-203ENST00000428135 ZBTB26Q9HCK0 441 aa9.33□□□□□ -0.92
SNX13-203ENST00000428135 SRA1Q9HD15 236 aaKnown RBP9.33□□□□□ -0.92
SNX13-203ENST00000428135 LAMP5Q9UJQ1 280 aa9.33□□□□□ -0.92
SNX13-203ENST00000428135 ING4Q9UNL4 249 aa9.33□□□□□ -0.92
SNX13-203ENST00000428135 MAN2B2Q9Y2E5 1009 aa9.33□□□□□ -0.92
SNX13-203ENST00000428135 VEGFDO43915 354 aa9.33□□□□□ -0.92
SNX13-203ENST00000428135 AGR2O95994 175 aa9.33□□□□□ -0.92
SNX13-203ENST00000428135 CD36P16671 472 aa9.33□□□□□ -0.92
SNX13-203ENST00000428135 HNRNPA2B1P22626 353 aaKnown RBP9.33□□□□□ -0.92
SNX13-203ENST00000428135 ECH1Q13011 328 aa9.33□□□□□ -0.92
SNX13-203ENST00000428135 TSTQ16762 297 aaKnown RBP9.33□□□□□ -0.92
SNX13-203ENST00000428135 KLHL22Q53GT1 634 aa9.33□□□□□ -0.92
SNX13-203ENST00000428135 HSD11B1LQ7Z5J1 315 aa9.33□□□□□ -0.92
SNX13-203ENST00000428135 SNX29P2Q8IUI4 249 aa9.33□□□□□ -0.92
SNX13-203ENST00000428135 TCEANCQ8N8B7 351 aa9.33□□□□□ -0.92
SNX13-203ENST00000428135 FANK1Q8TC84 345 aa9.33□□□□□ -0.92
SNX13-203ENST00000428135 NSMAFQ92636 917 aa9.33□□□□□ -0.92
SNX13-203ENST00000428135 CXorf21Q9HAI6 301 aa9.33□□□□□ -0.92
SNX13-203ENST00000428135 CCL26Q9Y258 94 aa9.33□□□□□ -0.92
SNX13-203ENST00000428135 A0A1W2PRQ8 180 aa9.33□□□□□ -0.92
SNX13-203ENST00000428135 H7C0S8 307 aa9.33□□□□□ -0.92
SNX13-203ENST00000428135 PVRP15151 417 aa9.33□□□□□ -0.92
SNX13-203ENST00000428135 TNFRSF1BP20333 461 aa9.33□□□□□ -0.92
SNX13-203ENST00000428135 MAN2A2P49641 1150 aa9.33□□□□□ -0.92
SNX13-203ENST00000428135 ALDH3A2P51648 485 aa9.33□□□□□ -0.92
SNX13-203ENST00000428135 MERTKQ12866 999 aa9.33□□□□□ -0.92
SNX13-203ENST00000428135 DAG1Q14118 895 aa9.33□□□□□ -0.92
SNX13-203ENST00000428135 ERV3-1Q14264 604 aa9.33□□□□□ -0.92
SNX13-203ENST00000428135 EGFLAMQ63HQ2 1017 aa9.33□□□□□ -0.92
SNX13-203ENST00000428135 ZNF783Q6ZMS7 281 aa9.33□□□□□ -0.92
SNX13-203ENST00000428135 WDR53Q7Z5U6 358 aaPredicted RBP9.33□□□□□ -0.92
SNX13-203ENST00000428135 MRPL10Q7Z7H8 261 aaKnown RBP9.33□□□□□ -0.92
SNX13-203ENST00000428135 MFSD2AQ8NA29 543 aa9.33□□□□□ -0.92
SNX13-203ENST00000428135 RIT1Q92963 219 aa9.33□□□□□ -0.92
SNX13-203ENST00000428135 MRM3Q9HC36 420 aaKnown RBP9.33□□□□□ -0.92
SNX13-203ENST00000428135 A0A1W2PRG6 482 aa9.33□□□□□ -0.92
SNX13-203ENST00000428135 SRRM3A6NNA2 597 aaPredicted RBP9.33□□□□□ -0.92
SNX13-203ENST00000428135 SGK494L7N484 410 aa9.33□□□□□ -0.92
SNX13-203ENST00000428135 TRMUO75648 421 aaKnown RBP9.33□□□□□ -0.92
SNX13-203ENST00000428135 SLC16A8O95907 504 aa9.33□□□□□ -0.92
SNX13-203ENST00000428135 ALDOAP04075 364 aaKnown RBP9.33□□□□□ -0.92
SNX13-203ENST00000428135 CXCL12P48061 93 aa9.33□□□□□ -0.92
SNX13-203ENST00000428135 ZNF252P-AS1Q0IIN9 211 aa9.33□□□□□ -0.92
SNX13-203ENST00000428135 ZNF283Q8N7M2 679 aa9.33□□□□□ -0.92
SNX13-203ENST00000428135 S100ZQ8WXG8 99 aa9.33□□□□□ -0.92
SNX13-203ENST00000428135 ZNF689Q96CS4 500 aaPredicted RBP9.33□□□□□ -0.92
SNX13-203ENST00000428135 FBXL20Q96IG2 436 aa9.33□□□□□ -0.92
SNX13-203ENST00000428135 ZNF717Q9BY31 904 aaPredicted RBP9.33□□□□□ -0.92
SNX13-203ENST00000428135 TMED5Q9Y3A6 229 aa9.33□□□□□ -0.92
SNX13-203ENST00000428135 LINC01553A4QN01 128 aa9.33□□□□□ -0.92
SNX13-203ENST00000428135 FABP12A6NFH5 140 aa9.33□□□□□ -0.92
SNX13-203ENST00000428135 M0QZQ0 153 aa9.33□□□□□ -0.92
SNX13-203ENST00000428135 ZNF217O75362 1048 aa9.33□□□□□ -0.92
SNX13-203ENST00000428135 EMX2Q04743 252 aa9.33□□□□□ -0.92
SNX13-203ENST00000428135 ABCA11PQ4W5N1 156 aa9.33□□□□□ -0.92
SNX13-203ENST00000428135 C6orf136Q5SQH8 315 aa9.33□□□□□ -0.92
SNX13-203ENST00000428135 PIGWQ7Z7B1 504 aa9.33□□□□□ -0.92
SNX13-203ENST00000428135 CARM1Q86X55 608 aa9.33□□□□□ -0.92
SNX13-203ENST00000428135 SLC15A3Q8IY34 581 aa9.33□□□□□ -0.92
SNX13-203ENST00000428135 CLECL1Q8IZS7 167 aa9.33□□□□□ -0.92
SNX13-203ENST00000428135 ZBTB8BQ8NAP8 495 aaPredicted RBP9.33□□□□□ -0.92
SNX13-203ENST00000428135 WDR60Q8WVS4 1066 aa9.33□□□□□ -0.92
SNX13-203ENST00000428135 TRIM63Q969Q1 353 aa9.33□□□□□ -0.92
SNX13-203ENST00000428135 TOX2Q96NM4 488 aa9.33□□□□□ -0.92
SNX13-203ENST00000428135 ATXN10Q9UBB4 475 aa9.33□□□□□ -0.92
SNX13-203ENST00000428135 DNMT3BQ9UBC3 853 aaKnown RBP9.33□□□□□ -0.92
SNX13-203ENST00000428135 SARDHQ9UL12 918 aa9.33□□□□□ -0.92
SNX13-203ENST00000428135 FARSAQ9Y285 508 aaKnown RBP9.33□□□□□ -0.92
SNX13-203ENST00000428135 NUMBLQ9Y6R0 609 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms