RNA–Protein interactions for RNA: ENST00000428014.1

SMC1A-203, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-203ENST00000428014 OR4D2P58180 307 aa8.56□□□□□ -1.04
SMC1A-203ENST00000428014 RAB8AP61006 207 aa8.56□□□□□ -1.04
SMC1A-203ENST00000428014 SNRPNP63162 240 aaKnown RBP8.56□□□□□ -1.04
SMC1A-203ENST00000428014 PSPHP78330 225 aa8.56□□□□□ -1.04
SMC1A-203ENST00000428014 SLC18A2Q05940 514 aa8.56□□□□□ -1.04
SMC1A-203ENST00000428014 CSTF3Q12996 717 aaKnown RBP8.56□□□□□ -1.04
SMC1A-203ENST00000428014 LCP2Q13094 533 aa8.56□□□□□ -1.04
SMC1A-203ENST00000428014 RUNX2Q13950 521 aa8.56□□□□□ -1.04
SMC1A-203ENST00000428014 INPP5JQ15735 1006 aaPredicted RBP8.56□□□□□ -1.04
SMC1A-203ENST00000428014 BTBD16Q32M84 506 aa8.56□□□□□ -1.04
SMC1A-203ENST00000428014 C18orf21Q32NC0 220 aaPredicted RBP8.56□□□□□ -1.04
SMC1A-203ENST00000428014 SFT2D3Q587I9 215 aa8.56□□□□□ -1.04
SMC1A-203ENST00000428014 ACER2Q5QJU3 275 aa8.56□□□□□ -1.04
SMC1A-203ENST00000428014 ZNF678Q5SXM1 525 aa8.56□□□□□ -1.04
SMC1A-203ENST00000428014 ABHD17BQ5VST6 288 aa8.56□□□□□ -1.04
SMC1A-203ENST00000428014 GALNT18Q6P9A2 607 aa8.56□□□□□ -1.04
SMC1A-203ENST00000428014 NUDT13Q86X67 352 aa8.56□□□□□ -1.04
SMC1A-203ENST00000428014 DND1Q8IYX4 353 aaKnown RBP8.56□□□□□ -1.04
SMC1A-203ENST00000428014 SAMD14Q8IZD0 417 aaPredicted RBP8.56□□□□□ -1.04
SMC1A-203ENST00000428014 APCDD1LQ8NCL9 501 aa8.56□□□□□ -1.04
SMC1A-203ENST00000428014 NFAM1Q8NET5 270 aaPredicted RBP8.56□□□□□ -1.04
SMC1A-203ENST00000428014 B3GNT7Q8NFL0 401 aa8.56□□□□□ -1.04
SMC1A-203ENST00000428014 OR5T3Q8NGG3 340 aa8.56□□□□□ -1.04
SMC1A-203ENST00000428014 CPT1CQ8TCG5 803 aa8.56□□□□□ -1.04
SMC1A-203ENST00000428014 AENQ8WTP8 325 aaKnown RBP8.56□□□□□ -1.04
SMC1A-203ENST00000428014 C8orf44Q96CB5 159 aa8.56□□□□□ -1.04
SMC1A-203ENST00000428014 VMP1Q96GC9 406 aa8.56□□□□□ -1.04
SMC1A-203ENST00000428014 ZNF717Q9BY31 904 aaPredicted RBP8.56□□□□□ -1.04
SMC1A-203ENST00000428014 KLHL31Q9H511 634 aa8.56□□□□□ -1.04
SMC1A-203ENST00000428014 ZBTB26Q9HCK0 441 aa8.56□□□□□ -1.04
SMC1A-203ENST00000428014 PRTFDC1Q9NRG1 225 aa8.56□□□□□ -1.04
SMC1A-203ENST00000428014 SDAD1Q9NVU7 687 aaKnown RBP eCLIP8.56□□□□□ -1.04
SMC1A-203ENST00000428014 RAB21Q9UL25 225 aa8.56□□□□□ -1.04
SMC1A-203ENST00000428014 SPTBN1Q01082 2364 aaKnown RBP8.56□□□□□ -1.04
SMC1A-203ENST00000428014 SPTAN1Q13813 2472 aaKnown RBP8.55□□□□□ -1.04
SMC1A-203ENST00000428014 A0A0A6YYD5 115 aa8.55□□□□□ -1.04
SMC1A-203ENST00000428014 ASPDHA6ND91 283 aa8.55□□□□□ -1.04
SMC1A-203ENST00000428014 PLPP1O14494 284 aa8.55□□□□□ -1.04
SMC1A-203ENST00000428014 FCHO1O14526 889 aa8.55□□□□□ -1.04
SMC1A-203ENST00000428014 DYRK3O43781 588 aa8.55□□□□□ -1.04
SMC1A-203ENST00000428014 VPS4BO75351 444 aa8.55□□□□□ -1.04
SMC1A-203ENST00000428014 JRKO75564 520 aa8.55□□□□□ -1.04
SMC1A-203ENST00000428014 CRYABP02511 175 aaKnown RBP8.55□□□□□ -1.04
SMC1A-203ENST00000428014 KRT6AP02538 564 aa8.55□□□□□ -1.04
SMC1A-203ENST00000428014 KRT6BP04259 564 aa8.55□□□□□ -1.04
SMC1A-203ENST00000428014 SERPIND1P05546 499 aa8.55□□□□□ -1.04
SMC1A-203ENST00000428014 COX7A2P14406 83 aa8.55□□□□□ -1.04
SMC1A-203ENST00000428014 BSGP35613 385 aa8.55□□□□□ -1.04
SMC1A-203ENST00000428014 HSD17B3P37058 310 aa8.55□□□□□ -1.04
SMC1A-203ENST00000428014 KRT6CP48668 564 aa8.55□□□□□ -1.04
SMC1A-203ENST00000428014 PLA2G16P53816 162 aa8.55□□□□□ -1.04
SMC1A-203ENST00000428014 CLCQ05315 142 aa8.55□□□□□ -1.04
SMC1A-203ENST00000428014 ACTN3Q08043 901 aaPredicted RBP8.55□□□□□ -1.04
SMC1A-203ENST00000428014 ASPHQ12797 758 aa8.55□□□□□ -1.04
SMC1A-203ENST00000428014 IFT88Q13099 833 aa8.55□□□□□ -1.04
SMC1A-203ENST00000428014 ZRSR2Q15696 482 aaKnown RBP8.55□□□□□ -1.04
SMC1A-203ENST00000428014 SPRED3Q2MJR0 410 aa8.55□□□□□ -1.04
SMC1A-203ENST00000428014 PLEKHN1Q494U1 663 aaPredicted RBP8.55□□□□□ -1.04
SMC1A-203ENST00000428014 NADK2Q4G0N4 442 aa8.55□□□□□ -1.04
SMC1A-203ENST00000428014 TEX35Q5T0J7 233 aa8.55□□□□□ -1.04
SMC1A-203ENST00000428014 UBAP2Q5T6F2 1119 aaKnown RBP8.55□□□□□ -1.04
SMC1A-203ENST00000428014 ZNF324BQ6AW86 544 aaPredicted RBP8.55□□□□□ -1.04
SMC1A-203ENST00000428014 BNC2Q6ZN30 1099 aaPredicted RBP8.55□□□□□ -1.04
SMC1A-203ENST00000428014 SHISA6Q6ZSJ9 500 aa8.55□□□□□ -1.04
SMC1A-203ENST00000428014 MILR1Q7Z6M3 343 aa8.55□□□□□ -1.04
SMC1A-203ENST00000428014 GPR180Q86V85 440 aa8.55□□□□□ -1.04
SMC1A-203ENST00000428014 PTRH1Q86Y79 214 aaKnown RBP8.55□□□□□ -1.04
SMC1A-203ENST00000428014 ST13P4Q8IZP2 240 aaPredicted RBP8.55□□□□□ -1.04
SMC1A-203ENST00000428014 KIRREL3Q8IZU9 778 aa8.55□□□□□ -1.04
SMC1A-203ENST00000428014 METTL4Q8N3J2 472 aa8.55□□□□□ -1.04
SMC1A-203ENST00000428014 POGLUT1Q8NBL1 392 aa8.55□□□□□ -1.04
SMC1A-203ENST00000428014 ST6GALNAC3Q8NDV1 305 aa8.55□□□□□ -1.04
SMC1A-203ENST00000428014 C17orf47Q8NEP4 570 aa8.55□□□□□ -1.04
SMC1A-203ENST00000428014 SUN3Q8TAQ9 357 aa8.55□□□□□ -1.04
SMC1A-203ENST00000428014 FAM76AQ8TAV0 307 aa8.55□□□□□ -1.04
SMC1A-203ENST00000428014 NUBPLQ8TB37 319 aa8.55□□□□□ -1.04
SMC1A-203ENST00000428014 DNAJB14Q8TBM8 379 aa8.55□□□□□ -1.04
SMC1A-203ENST00000428014 BRIX1Q8TDN6 353 aaKnown RBP8.55□□□□□ -1.04
SMC1A-203ENST00000428014 FAR1Q8WVX9 515 aa8.55□□□□□ -1.04
SMC1A-203ENST00000428014 ATP6V1E2Q96A05 226 aa8.55□□□□□ -1.04
SMC1A-203ENST00000428014 ESAMQ96AP7 390 aa8.55□□□□□ -1.04
SMC1A-203ENST00000428014 ERP27Q96DN0 273 aa8.55□□□□□ -1.04
SMC1A-203ENST00000428014 C11orf24Q96F05 449 aaPredicted RBP8.55□□□□□ -1.04
SMC1A-203ENST00000428014 ZNF764Q96H86 408 aaPredicted RBP8.55□□□□□ -1.04
SMC1A-203ENST00000428014 F2RL3Q96RI0 385 aa8.55□□□□□ -1.04
SMC1A-203ENST00000428014 MACROD1Q9BQ69 325 aa8.55□□□□□ -1.04
SMC1A-203ENST00000428014 SLX1AQ9BQ83 275 aa8.55□□□□□ -1.04
SMC1A-203ENST00000428014 UNKQ9C0B0 810 aaKnown RBP8.55□□□□□ -1.04
SMC1A-203ENST00000428014 ILKAPQ9H0C8 392 aaPredicted RBP8.55□□□□□ -1.04
SMC1A-203ENST00000428014 NOL11Q9H8H0 719 aaKnown RBP8.55□□□□□ -1.04
SMC1A-203ENST00000428014 WDR41Q9HAD4 459 aa8.55□□□□□ -1.04
SMC1A-203ENST00000428014 SSU72Q9NP77 194 aaKnown RBP8.55□□□□□ -1.04
SMC1A-203ENST00000428014 STMN3Q9NZ72 180 aa8.55□□□□□ -1.04
SMC1A-203ENST00000428014 TMEM216Q9P0N5 145 aa8.55□□□□□ -1.04
SMC1A-203ENST00000428014 CPSF2Q9P2I0 782 aaKnown RBP8.55□□□□□ -1.04
SMC1A-203ENST00000428014 VPS4AQ9UN37 437 aa8.55□□□□□ -1.04
SMC1A-203ENST00000428014 TENM4Q6N022 2769 aa8.54□□□□□ -1.04
SMC1A-203ENST00000428014 USP9YO00507 2555 aaPredicted RBP8.54□□□□□ -1.04
SMC1A-203ENST00000428014 A6NL46 340 aa8.54□□□□□ -1.04
SMC1A-203ENST00000428014 OR6C76A6NM76 312 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms