RNA–Protein interactions for RNA: ENST00000427193.1

C9orf3-205, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-205ENST00000427193 ZFHX3Q15911 3703 aa5.28□□□□□ -1.56
C9orf3-205ENST00000427193 NBASA2RRP1 2371 aa5.28□□□□□ -1.56
C9orf3-205ENST00000427193 TRABD2BA6NFA1 517 aa5.28□□□□□ -1.56
C9orf3-205ENST00000427193 IFITM10A6NMD0 228 aa5.28□□□□□ -1.56
C9orf3-205ENST00000427193 PLK4O00444 970 aa5.28□□□□□ -1.56
C9orf3-205ENST00000427193 KPNA3O00505 521 aaPredicted RBP5.28□□□□□ -1.56
C9orf3-205ENST00000427193 KPNA5O15131 536 aa5.28□□□□□ -1.56
C9orf3-205ENST00000427193 ATP8B1O43520 1251 aa5.28□□□□□ -1.56
C9orf3-205ENST00000427193 SYNCRIPO60506 623 aaKnown RBP5.28□□□□□ -1.56
C9orf3-205ENST00000427193 ERLIN1O75477 346 aa5.28□□□□□ -1.56
C9orf3-205ENST00000427193 NEBLO76041 1014 aa5.28□□□□□ -1.56
C9orf3-205ENST00000427193 CLDN7O95471 211 aa5.28□□□□□ -1.56
C9orf3-205ENST00000427193 APBB3O95704 486 aa5.28□□□□□ -1.56
C9orf3-205ENST00000427193 IL1BP01584 269 aa5.28□□□□□ -1.56
C9orf3-205ENST00000427193 SHBGP04278 402 aa5.28□□□□□ -1.56
C9orf3-205ENST00000427193 POLBP06746 335 aa5.28□□□□□ -1.56
C9orf3-205ENST00000427193 PIRTP0C851 137 aa5.28□□□□□ -1.56
C9orf3-205ENST00000427193 CD9P21926 228 aa5.28□□□□□ -1.56
C9orf3-205ENST00000427193 TRIM23P36406 574 aa5.28□□□□□ -1.56
C9orf3-205ENST00000427193 MAGEA12P43365 314 aa5.28□□□□□ -1.56
C9orf3-205ENST00000427193 CCR10P46092 362 aa5.28□□□□□ -1.56
C9orf3-205ENST00000427193 LEPRP48357 1165 aaKnown RBP5.28□□□□□ -1.56
C9orf3-205ENST00000427193 TPMTP51580 245 aa5.28□□□□□ -1.56
C9orf3-205ENST00000427193 ATXN3P54252 364 aaPredicted RBP5.28□□□□□ -1.56
C9orf3-205ENST00000427193 GAS1P54826 345 aa5.28□□□□□ -1.56
C9orf3-205ENST00000427193 ADPRHP54922 357 aa5.28□□□□□ -1.56
C9orf3-205ENST00000427193 PDE1BQ01064 536 aa5.28□□□□□ -1.56
C9orf3-205ENST00000427193 CASP8Q14790 479 aa5.28□□□□□ -1.56
C9orf3-205ENST00000427193 STARD3Q14849 445 aa5.28□□□□□ -1.56
C9orf3-205ENST00000427193 MAPKAPK3Q16644 382 aa5.28□□□□□ -1.56
C9orf3-205ENST00000427193 ZNF284Q2VY69 593 aa5.28□□□□□ -1.56
C9orf3-205ENST00000427193 MAP9Q49MG5 647 aa5.28□□□□□ -1.56
C9orf3-205ENST00000427193 ZNF658BQ4V348 819 aaPredicted RBP5.28□□□□□ -1.56
C9orf3-205ENST00000427193 ZDHHC20Q5W0Z9 365 aa5.28□□□□□ -1.56
C9orf3-205ENST00000427193 PDPK2PQ6A1A2 396 aa5.28□□□□□ -1.56
C9orf3-205ENST00000427193 CES3Q6UWW8 571 aa5.28□□□□□ -1.56
C9orf3-205ENST00000427193 RFLNAQ6ZTI6 216 aa5.28□□□□□ -1.56
C9orf3-205ENST00000427193 MARK2Q7KZI7 788 aaKnown RBP5.28□□□□□ -1.56
C9orf3-205ENST00000427193 HSD11B1LQ7Z5J1 315 aa5.28□□□□□ -1.56
C9orf3-205ENST00000427193 RABEPKQ7Z6M1 372 aa5.28□□□□□ -1.56
C9orf3-205ENST00000427193 TRIM69Q86WT6 500 aa5.28□□□□□ -1.56
C9orf3-205ENST00000427193 LMNTD2Q8IXW0 634 aa5.28□□□□□ -1.56
C9orf3-205ENST00000427193 PIANPQ8IYJ0 282 aa5.28□□□□□ -1.56
C9orf3-205ENST00000427193 NRSN1Q8IZ57 195 aa5.28□□□□□ -1.56
C9orf3-205ENST00000427193 DNAAF3Q8N9W5 541 aa5.28□□□□□ -1.56
C9orf3-205ENST00000427193 ZBTB8BQ8NAP8 495 aaPredicted RBP5.28□□□□□ -1.56
C9orf3-205ENST00000427193 CEP76Q8TAP6 659 aa5.28□□□□□ -1.56
C9orf3-205ENST00000427193 DCAKDQ8WVC6 231 aa5.28□□□□□ -1.56
C9orf3-205ENST00000427193 SLC44A1Q8WWI5 657 aa5.28□□□□□ -1.56
C9orf3-205ENST00000427193 CENPTQ96BT3 561 aa5.28□□□□□ -1.56
C9orf3-205ENST00000427193 DTD2Q96FN9 168 aa5.28□□□□□ -1.56
C9orf3-205ENST00000427193 SIPA1Q96FS4 1042 aa5.28□□□□□ -1.56
C9orf3-205ENST00000427193 CERS2Q96G23 380 aa5.28□□□□□ -1.56
C9orf3-205ENST00000427193 PPP1R16AQ96I34 528 aa5.28□□□□□ -1.56
C9orf3-205ENST00000427193 DNAJC1Q96KC8 554 aaKnown RBP5.28□□□□□ -1.56
C9orf3-205ENST00000427193 TBATAQ96M53 351 aa5.28□□□□□ -1.56
C9orf3-205ENST00000427193 ARFGAP3Q9NP61 516 aa5.28□□□□□ -1.56
C9orf3-205ENST00000427193 KRCC1Q9NPI7 259 aaPredicted RBP5.28□□□□□ -1.56
C9orf3-205ENST00000427193 MARCH4Q9P2E8 410 aaPredicted RBP5.28□□□□□ -1.56
C9orf3-205ENST00000427193 LGALS13Q9UHV8 139 aa5.28□□□□□ -1.56
C9orf3-205ENST00000427193 ITM2BQ9Y287 266 aa5.28□□□□□ -1.56
C9orf3-205ENST00000427193 PSAT1Q9Y617 370 aa5.28□□□□□ -1.56
C9orf3-205ENST00000427193 TNRC6BQ9UPQ9 1833 aaKnown RBP5.27□□□□□ -1.57
C9orf3-205ENST00000427193 PLXND1Q9Y4D7 1925 aa5.27□□□□□ -1.57
C9orf3-205ENST00000427193 IGHV1OR15-9A0A0B4J2B8 117 aa5.27□□□□□ -1.57
C9orf3-205ENST00000427193 C1orf232A0A0U1RR37 186 aa5.27□□□□□ -1.57
C9orf3-205ENST00000427193 TCRBV21S2A2A0A5A6 115 aa5.27□□□□□ -1.57
C9orf3-205ENST00000427193 CCDC162PA2VCL2 907 aa5.27□□□□□ -1.57
C9orf3-205ENST00000427193 C2orf81A6NN90 581 aa5.27□□□□□ -1.57
C9orf3-205ENST00000427193 UGT1A9O60656 530 aa5.27□□□□□ -1.57
C9orf3-205ENST00000427193 RECQL5O94762 991 aaPredicted RBP5.27□□□□□ -1.57
C9orf3-205ENST00000427193 VAPBO95292 243 aa5.27□□□□□ -1.57
C9orf3-205ENST00000427193 ACSL3O95573 720 aa5.27□□□□□ -1.57
C9orf3-205ENST00000427193 IGHV4-34P06331 123 aa5.27□□□□□ -1.57
C9orf3-205ENST00000427193 HOXC4P09017 264 aaPredicted RBP5.27□□□□□ -1.57
C9orf3-205ENST00000427193 CTPS1P17812 591 aa5.27□□□□□ -1.57
C9orf3-205ENST00000427193 BCKDHBP21953 392 aa5.27□□□□□ -1.57
C9orf3-205ENST00000427193 HADHAP40939 763 aa5.27□□□□□ -1.57
C9orf3-205ENST00000427193 STT3AP46977 705 aa5.27□□□□□ -1.57
C9orf3-205ENST00000427193 PSMD8P48556 350 aa5.27□□□□□ -1.57
C9orf3-205ENST00000427193 LMAN1P49257 510 aa5.27□□□□□ -1.57
C9orf3-205ENST00000427193 CCR5P51681 352 aa5.27□□□□□ -1.57
C9orf3-205ENST00000427193 EIF3BP55884 814 aaKnown RBP5.27□□□□□ -1.57
C9orf3-205ENST00000427193 RIPPLY3P57055 190 aa5.27□□□□□ -1.57
C9orf3-205ENST00000427193 DSCR9P59020 149 aa5.27□□□□□ -1.57
C9orf3-205ENST00000427193 ELP6Q0PNE2 266 aa5.27□□□□□ -1.57
C9orf3-205ENST00000427193 NFATC2Q13469 925 aa5.27□□□□□ -1.57
C9orf3-205ENST00000427193 NAB1Q13506 487 aa5.27□□□□□ -1.57
C9orf3-205ENST00000427193 ZKSCAN8Q15776 578 aaPredicted RBP5.27□□□□□ -1.57
C9orf3-205ENST00000427193 LONRF1Q17RB8 773 aa5.27□□□□□ -1.57
C9orf3-205ENST00000427193 WSCD2Q2TBF2 565 aa5.27□□□□□ -1.57
C9orf3-205ENST00000427193 KBTBD12Q3ZCT8 623 aa5.27□□□□□ -1.57
C9orf3-205ENST00000427193 GPR33Q49SQ1 333 aa5.27□□□□□ -1.57
C9orf3-205ENST00000427193 SETMARQ53H47 684 aaPredicted RBP5.27□□□□□ -1.57
C9orf3-205ENST00000427193 LRRC73Q5JTD7 316 aa5.27□□□□□ -1.57
C9orf3-205ENST00000427193 ALS2CLQ60I27 953 aa5.27□□□□□ -1.57
C9orf3-205ENST00000427193 NEPROQ6NW34 567 aa5.27□□□□□ -1.57
C9orf3-205ENST00000427193 TIFABQ6ZNK6 161 aa5.27□□□□□ -1.57
C9orf3-205ENST00000427193 GLT6D1Q7Z4J2 308 aa5.27□□□□□ -1.57
C9orf3-205ENST00000427193 SLC26A11Q86WA9 606 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms