RNA–Protein interactions for RNA: ENST00000425815.5

SMARCAL1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 3

Gene SMARCAL1, Length 310 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-205ENST00000425815 PPP6CO00743 305 aa17.11■□□□□ 0.33
SMARCAL1-205ENST00000425815 PLPP1O14494 284 aa17.11■□□□□ 0.33
SMARCAL1-205ENST00000425815 PRKNO60260 465 aaPredicted RBP17.11■□□□□ 0.33
SMARCAL1-205ENST00000425815 RASAL1O95294 804 aa17.11■□□□□ 0.33
SMARCAL1-205ENST00000425815 PIK3CGP48736 1102 aa17.11■□□□□ 0.33
SMARCAL1-205ENST00000425815 TAS2R50P59544 299 aa17.11■□□□□ 0.33
SMARCAL1-205ENST00000425815 SLAMF1Q13291 335 aa17.11■□□□□ 0.33
SMARCAL1-205ENST00000425815 TERF2Q15554 542 aa17.11■□□□□ 0.33
SMARCAL1-205ENST00000425815 ZRSR2Q15696 482 aaKnown RBP17.11■□□□□ 0.33
SMARCAL1-205ENST00000425815 AP5B1Q2VPB7 878 aa17.11■□□□□ 0.33
SMARCAL1-205ENST00000425815 FAM219BQ5XKK7 198 aa17.11■□□□□ 0.33
SMARCAL1-205ENST00000425815 PTPMT1Q8WUK0 201 aaPredicted RBP17.11■□□□□ 0.33
SMARCAL1-205ENST00000425815 NR4A3Q92570 626 aa17.11■□□□□ 0.33
SMARCAL1-205ENST00000425815 SCMH1Q96GD3 660 aa17.11■□□□□ 0.33
SMARCAL1-205ENST00000425815 NTMT1Q9BV86 223 aa17.11■□□□□ 0.33
SMARCAL1-205ENST00000425815 ALOXE3Q9BYJ1 711 aa17.11■□□□□ 0.33
SMARCAL1-205ENST00000425815 MRPL46Q9H2W6 279 aaKnown RBP17.11■□□□□ 0.33
SMARCAL1-205ENST00000425815 TRIM45Q9H8W5 580 aaPredicted RBP17.11■□□□□ 0.33
SMARCAL1-205ENST00000425815 OLAHQ9NV23 265 aa17.11■□□□□ 0.33
SMARCAL1-205ENST00000425815 PSD3Q9NYI0 1048 aa17.11■□□□□ 0.33
SMARCAL1-205ENST00000425815 VTI1BQ9UEU0 232 aa17.11■□□□□ 0.33
SMARCAL1-205ENST00000425815 FBXW2Q9UKT8 454 aa17.11■□□□□ 0.33
SMARCAL1-205ENST00000425815 PCDHGB6Q9Y5F9 930 aa17.11■□□□□ 0.33
SMARCAL1-205ENST00000425815 WASHC1A8K0Z3 465 aa17.1■□□□□ 0.33
SMARCAL1-205ENST00000425815 LDB3O75112 727 aa17.1■□□□□ 0.33
SMARCAL1-205ENST00000425815 CLDN9O95484 217 aa17.1■□□□□ 0.33
SMARCAL1-205ENST00000425815 RPS17P08708 135 aaKnown RBP17.1■□□□□ 0.33
SMARCAL1-205ENST00000425815 PTX3P26022 381 aaPredicted RBP17.1■□□□□ 0.33
SMARCAL1-205ENST00000425815 TRHRP34981 398 aaPredicted RBP17.1■□□□□ 0.33
SMARCAL1-205ENST00000425815 PMP22Q01453 160 aa17.1■□□□□ 0.33
SMARCAL1-205ENST00000425815 TRAF3Q13114 568 aa17.1■□□□□ 0.33
SMARCAL1-205ENST00000425815 MRM1Q6IN84 353 aaKnown RBP17.1■□□□□ 0.33
SMARCAL1-205ENST00000425815 SUN3Q8TAQ9 357 aa17.1■□□□□ 0.33
SMARCAL1-205ENST00000425815 SSC4DQ8WTU2 575 aa17.1■□□□□ 0.33
SMARCAL1-205ENST00000425815 MZB1Q8WU39 189 aa17.1■□□□□ 0.33
SMARCAL1-205ENST00000425815 NCLNQ969V3 563 aa17.1■□□□□ 0.33
SMARCAL1-205ENST00000425815 RGMAQ96B86 450 aa17.1■□□□□ 0.33
SMARCAL1-205ENST00000425815 DEFB126Q9BYW3 111 aa17.1■□□□□ 0.33
SMARCAL1-205ENST00000425815 TMEM216Q9P0N5 145 aa17.1■□□□□ 0.33
SMARCAL1-205ENST00000425815 ABI3Q9P2A4 366 aa17.1■□□□□ 0.33
SMARCAL1-205ENST00000425815 TMCO1Q9UM00 188 aa17.1■□□□□ 0.33
SMARCAL1-205ENST00000425815 MRPS33Q9Y291 106 aaKnown RBP17.1■□□□□ 0.33
SMARCAL1-205ENST00000425815 ATG4BQ9Y4P1 393 aa17.1■□□□□ 0.33
SMARCAL1-205ENST00000425815 SCN2AQ99250 2005 aa17.09■□□□□ 0.33
SMARCAL1-205ENST00000425815 TRBV11-1A0A0K0K1C0 115 aa17.09■□□□□ 0.33
SMARCAL1-205ENST00000425815 A8MT66 165 aa17.09■□□□□ 0.33
SMARCAL1-205ENST00000425815 FOXE1O00358 373 aaPredicted RBP17.09■□□□□ 0.33
SMARCAL1-205ENST00000425815 SMIM24O75264 130 aa17.09■□□□□ 0.33
SMARCAL1-205ENST00000425815 EEDO75530 441 aaKnown RBP17.09■□□□□ 0.33
SMARCAL1-205ENST00000425815 BSGP35613 385 aa17.09■□□□□ 0.33
SMARCAL1-205ENST00000425815 SSR2P43308 183 aa17.09■□□□□ 0.33
SMARCAL1-205ENST00000425815 CLCN2P51788 898 aa17.09■□□□□ 0.33
SMARCAL1-205ENST00000425815 HNRNPH2P55795 449 aaKnown RBP17.09■□□□□ 0.33
SMARCAL1-205ENST00000425815 ID2Q02363 134 aa17.09■□□□□ 0.33
SMARCAL1-205ENST00000425815 RCN2Q14257 317 aa17.09■□□□□ 0.33
SMARCAL1-205ENST00000425815 LGSNQ5TDP6 509 aa17.09■□□□□ 0.33
SMARCAL1-205ENST00000425815 C18orf63Q68DL7 685 aa17.09■□□□□ 0.33
SMARCAL1-205ENST00000425815 OR4N5Q8IXE1 308 aa17.09■□□□□ 0.33
SMARCAL1-205ENST00000425815 ZCCHC7Q8N3Z6 543 aaKnown RBP17.09■□□□□ 0.33
SMARCAL1-205ENST00000425815 ZNF321PQ8N8H1 164 aa17.09■□□□□ 0.33
SMARCAL1-205ENST00000425815 DNAJB8Q8NHS0 232 aa17.09■□□□□ 0.33
SMARCAL1-205ENST00000425815 ZNF483Q8TF39 744 aaPredicted RBP17.09■□□□□ 0.33
SMARCAL1-205ENST00000425815 MTFMTQ96DP5 389 aaKnown RBP17.09■□□□□ 0.33
SMARCAL1-205ENST00000425815 MTBPQ96DY7 904 aa17.09■□□□□ 0.33
SMARCAL1-205ENST00000425815 C1QTNF3Q9BXJ4 246 aa17.09■□□□□ 0.33
SMARCAL1-205ENST00000425815 ADAP2Q9NPF8 381 aa17.09■□□□□ 0.33
SMARCAL1-205ENST00000425815 KLHL1Q9NR64 748 aa17.09■□□□□ 0.33
SMARCAL1-205ENST00000425815 LRFN1Q9P244 771 aa17.09■□□□□ 0.33
SMARCAL1-205ENST00000425815 FETUBQ9UGM5 382 aa17.09■□□□□ 0.33
SMARCAL1-205ENST00000425815 ZNF225Q9UK10 706 aa17.09■□□□□ 0.33
SMARCAL1-205ENST00000425815 ASB4Q9Y574 426 aa17.09■□□□□ 0.33
SMARCAL1-205ENST00000425815 CPAMD8Q8IZJ3 1885 aa17.09■□□□□ 0.33
SMARCAL1-205ENST00000425815 UTP20O75691 2785 aaKnown RBP17.09■□□□□ 0.33
SMARCAL1-205ENST00000425815 RP1L1Q8IWN7 2480 aaPredicted RBP17.08■□□□□ 0.33
SMARCAL1-205ENST00000425815 A0A0A6YYD5 115 aa17.08■□□□□ 0.32
SMARCAL1-205ENST00000425815 CDK2AP1O14519 115 aa17.08■□□□□ 0.32
SMARCAL1-205ENST00000425815 PROM1O43490 865 aa17.08■□□□□ 0.32
SMARCAL1-205ENST00000425815 TMPRSS11DO60235 418 aa17.08■□□□□ 0.32
SMARCAL1-205ENST00000425815 FGF17O60258 216 aa17.08■□□□□ 0.32
SMARCAL1-205ENST00000425815 PRKRAO75569 313 aaKnown RBP17.08■□□□□ 0.32
SMARCAL1-205ENST00000425815 DDAH2O95865 285 aa17.08■□□□□ 0.32
SMARCAL1-205ENST00000425815 LDLRP01130 860 aa17.08■□□□□ 0.32
SMARCAL1-205ENST00000425815 SP1P08047 785 aa17.08■□□□□ 0.32
SMARCAL1-205ENST00000425815 CPN2P22792 545 aa17.08■□□□□ 0.32
SMARCAL1-205ENST00000425815 ARFIP1P53367 373 aa17.08■□□□□ 0.32
SMARCAL1-205ENST00000425815 CDH13P55290 713 aa17.08■□□□□ 0.32
SMARCAL1-205ENST00000425815 KCNK10P57789 538 aa17.08■□□□□ 0.32
SMARCAL1-205ENST00000425815 IGLV3-21P80748 117 aaPredicted RBP17.08■□□□□ 0.32
SMARCAL1-205ENST00000425815 OC90Q02509 493 aaPredicted RBP17.08■□□□□ 0.32
SMARCAL1-205ENST00000425815 CUL3Q13618 768 aa17.08■□□□□ 0.32
SMARCAL1-205ENST00000425815 ELOAQ14241 798 aaKnown RBP17.08■□□□□ 0.32
SMARCAL1-205ENST00000425815 ELAVL1Q15717 326 aaKnown RBP17.08■□□□□ 0.32
SMARCAL1-205ENST00000425815 SLC25A25Q6KCM7 469 aa17.08■□□□□ 0.32
SMARCAL1-205ENST00000425815 C16orf47Q6ZP98 133 aaPredicted RBP17.08■□□□□ 0.32
SMARCAL1-205ENST00000425815 GPR180Q86V85 440 aa17.08■□□□□ 0.32
SMARCAL1-205ENST00000425815 EIF1ADQ8N9N8 165 aaKnown RBP17.08■□□□□ 0.32
SMARCAL1-205ENST00000425815 THAP3Q8WTV1 239 aaPredicted RBP17.08■□□□□ 0.32
SMARCAL1-205ENST00000425815 UCN3Q969E3 161 aa17.08■□□□□ 0.32
SMARCAL1-205ENST00000425815 ATP6V1E2Q96A05 226 aa17.08■□□□□ 0.32
SMARCAL1-205ENST00000425815 REPS1Q96D71 796 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms