RNA–Protein interactions for RNA: ENST00000425444.1

SGCE-203, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 597 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-203ENST00000425444 ACTR8Q9H981 624 aa11.9□□□□□ -0.5
SGCE-203ENST00000425444 NECTIN3Q9NQS3 549 aa11.9□□□□□ -0.5
SGCE-203ENST00000425444 PRTFDC1Q9NRG1 225 aa11.9□□□□□ -0.5
SGCE-203ENST00000425444 ZNF490Q9ULM2 529 aaPredicted RBP11.9□□□□□ -0.5
SGCE-203ENST00000425444 MMACHCQ9Y4U1 282 aa11.9□□□□□ -0.5
SGCE-203ENST00000425444 NCOA6Q14686 2063 aaPredicted RBP11.9□□□□□ -0.51
SGCE-203ENST00000425444 TLN2Q9Y4G6 2542 aa11.89□□□□□ -0.51
SGCE-203ENST00000425444 A0A087WUV0 522 aaPredicted RBP11.89□□□□□ -0.51
SGCE-203ENST00000425444 EXOC1LA0A1B0GW35 172 aa11.89□□□□□ -0.51
SGCE-203ENST00000425444 TCRBV16S1A1N1A0A5B0 115 aa11.89□□□□□ -0.51
SGCE-203ENST00000425444 FAM221AA4D161 298 aa11.89□□□□□ -0.51
SGCE-203ENST00000425444 CLDN4O14493 209 aa11.89□□□□□ -0.51
SGCE-203ENST00000425444 PRAMEF2O60811 474 aa11.89□□□□□ -0.51
SGCE-203ENST00000425444 SH3BGRLO75368 114 aa11.89□□□□□ -0.51
SGCE-203ENST00000425444 RASAL1O95294 804 aa11.89□□□□□ -0.51
SGCE-203ENST00000425444 SERPINB1P30740 379 aa11.89□□□□□ -0.51
SGCE-203ENST00000425444 ARL1P40616 181 aaPredicted RBP11.89□□□□□ -0.51
SGCE-203ENST00000425444 CA7P43166 264 aa11.89□□□□□ -0.51
SGCE-203ENST00000425444 TDGF1P3P51864 188 aa11.89□□□□□ -0.51
SGCE-203ENST00000425444 SMSP52788 366 aa11.89□□□□□ -0.51
SGCE-203ENST00000425444 PPP2R2AP63151 447 aa11.89□□□□□ -0.51
SGCE-203ENST00000425444 OC90Q02509 493 aaPredicted RBP11.89□□□□□ -0.51
SGCE-203ENST00000425444 RUNX2Q13950 521 aa11.89□□□□□ -0.51
SGCE-203ENST00000425444 ADPRMQ3LIE5 342 aa11.89□□□□□ -0.51
SGCE-203ENST00000425444 ACER2Q5QJU3 275 aa11.89□□□□□ -0.51
SGCE-203ENST00000425444 ZNF324BQ6AW86 544 aaPredicted RBP11.89□□□□□ -0.51
SGCE-203ENST00000425444 GRHL2Q6ISB3 625 aa11.89□□□□□ -0.51
SGCE-203ENST00000425444 H3F3CQ6NXT2 135 aa11.89□□□□□ -0.51
SGCE-203ENST00000425444 ABHD17CQ6PCB6 329 aa11.89□□□□□ -0.51
SGCE-203ENST00000425444 TGIF2LYQ8IUE0 185 aa11.89□□□□□ -0.51
SGCE-203ENST00000425444 IFT20Q8IY31 132 aa11.89□□□□□ -0.51
SGCE-203ENST00000425444 SRFBP1Q8NEF9 429 aaKnown RBP11.89□□□□□ -0.51
SGCE-203ENST00000425444 NR4A3Q92570 626 aa11.89□□□□□ -0.51
SGCE-203ENST00000425444 SCYL1Q96KG9 808 aa11.89□□□□□ -0.51
SGCE-203ENST00000425444 KCNC2Q96PR1 638 aa11.89□□□□□ -0.51
SGCE-203ENST00000425444 SPOCK3Q9BQ16 436 aa11.89□□□□□ -0.51
SGCE-203ENST00000425444 UTP23Q9BRU9 249 aaKnown RBP11.89□□□□□ -0.51
SGCE-203ENST00000425444 CENPKQ9BS16 269 aa11.89□□□□□ -0.51
SGCE-203ENST00000425444 FUT8Q9BYC5 575 aa11.89□□□□□ -0.51
SGCE-203ENST00000425444 ROGDIQ9GZN7 287 aa11.89□□□□□ -0.51
SGCE-203ENST00000425444 ANKRD10Q9NXR5 420 aa11.89□□□□□ -0.51
SGCE-203ENST00000425444 NFU1Q9UMS0 254 aa11.89□□□□□ -0.51
SGCE-203ENST00000425444 TNPO3Q9Y5L0 923 aaKnown RBP11.89□□□□□ -0.51
SGCE-203ENST00000425444 INTS1Q8N201 2190 aaKnown RBP11.89□□□□□ -0.51
SGCE-203ENST00000425444 IGKV3D-11A0A0A0MRZ8 115 aa11.88□□□□□ -0.51
SGCE-203ENST00000425444 GABRR3A8MPY1 467 aa11.88□□□□□ -0.51
SGCE-203ENST00000425444 MYO1DO94832 1006 aa11.88□□□□□ -0.51
SGCE-203ENST00000425444 UNC5CO95185 931 aa11.88□□□□□ -0.51
SGCE-203ENST00000425444 TBX6O95947 436 aaPredicted RBP11.88□□□□□ -0.51
SGCE-203ENST00000425444 TGFB1P01137 390 aa11.88□□□□□ -0.51
SGCE-203ENST00000425444 MTHFD2P13995 350 aa11.88□□□□□ -0.51
SGCE-203ENST00000425444 CNTFP26441 200 aa11.88□□□□□ -0.51
SGCE-203ENST00000425444 CASP2P42575 452 aa11.88□□□□□ -0.51
SGCE-203ENST00000425444 SSR2P43308 183 aa11.88□□□□□ -0.51
SGCE-203ENST00000425444 PIK3CGP48736 1102 aa11.88□□□□□ -0.51
SGCE-203ENST00000425444 ST13P50502 369 aaKnown RBP11.88□□□□□ -0.51
SGCE-203ENST00000425444 RAP1GDS1P52306 607 aa11.88□□□□□ -0.51
SGCE-203ENST00000425444 ALDH18A1P54886 795 aaKnown RBP11.88□□□□□ -0.51
SGCE-203ENST00000425444 LIM2P55344 173 aa11.88□□□□□ -0.51
SGCE-203ENST00000425444 PHEXP78562 749 aa11.88□□□□□ -0.51
SGCE-203ENST00000425444 ADORA2A-AS1P86434 159 aa11.88□□□□□ -0.51
SGCE-203ENST00000425444 TSNAXIP1Q2TAA8 658 aa11.88□□□□□ -0.51
SGCE-203ENST00000425444 TMEM35AQ53FP2 167 aa11.88□□□□□ -0.51
SGCE-203ENST00000425444 ZNF766Q5HY98 468 aa11.88□□□□□ -0.51
SGCE-203ENST00000425444 TECRLQ5HYJ1 363 aa11.88□□□□□ -0.51
SGCE-203ENST00000425444 CHSY3Q70JA7 882 aa11.88□□□□□ -0.51
SGCE-203ENST00000425444 CLNKQ7Z7G1 428 aa11.88□□□□□ -0.51
SGCE-203ENST00000425444 ZNF595Q8IYB9 648 aa11.88□□□□□ -0.51
SGCE-203ENST00000425444 LAS2Q8IYD9 372 aa11.88□□□□□ -0.51
SGCE-203ENST00000425444 KIF2BQ8N4N8 673 aa11.88□□□□□ -0.51
SGCE-203ENST00000425444 OR7G3Q8NG95 312 aa11.88□□□□□ -0.51
SGCE-203ENST00000425444 ZNF473Q8WTR7 871 aaKnown RBP11.88□□□□□ -0.51
SGCE-203ENST00000425444 QRFPRQ96P65 431 aa11.88□□□□□ -0.51
SGCE-203ENST00000425444 CSF3RQ99062 836 aa11.88□□□□□ -0.51
SGCE-203ENST00000425444 MS4A8Q9BY19 250 aa11.88□□□□□ -0.51
SGCE-203ENST00000425444 DEFB126Q9BYW3 111 aa11.88□□□□□ -0.51
SGCE-203ENST00000425444 CDCP1Q9H5V8 836 aa11.88□□□□□ -0.51
SGCE-203ENST00000425444 PNO1Q9NRX1 252 aaKnown RBP11.88□□□□□ -0.51
SGCE-203ENST00000425444 DAPP1Q9UN19 280 aa11.88□□□□□ -0.51
SGCE-203ENST00000425444 SPACA6W5XKT8 324 aa11.88□□□□□ -0.51
SGCE-203ENST00000425444 CPAMD8Q8IZJ3 1885 aa11.88□□□□□ -0.51
SGCE-203ENST00000425444 MXRA5Q9NR99 2828 aa11.87□□□□□ -0.51
SGCE-203ENST00000425444 LRRC14BA6NHZ5 514 aa11.87□□□□□ -0.51
SGCE-203ENST00000425444 TRIM49D1C9J1S8 452 aa11.87□□□□□ -0.51
SGCE-203ENST00000425444 SAP18O00422 153 aaKnown RBP11.87□□□□□ -0.51
SGCE-203ENST00000425444 RTCAO00442 366 aaKnown RBP11.87□□□□□ -0.51
SGCE-203ENST00000425444 SMIM24O75264 130 aa11.87□□□□□ -0.51
SGCE-203ENST00000425444 CLDN14O95500 239 aa11.87□□□□□ -0.51
SGCE-203ENST00000425444 IFNA16P05015 189 aa11.87□□□□□ -0.51
SGCE-203ENST00000425444 RBP1P09455 135 aa11.87□□□□□ -0.51
SGCE-203ENST00000425444 RHOXF2BP0C7M4 288 aa11.87□□□□□ -0.51
SGCE-203ENST00000425444 ESRRAP11474 423 aaPredicted RBP11.87□□□□□ -0.51
SGCE-203ENST00000425444 KLK2P20151 261 aa11.87□□□□□ -0.51
SGCE-203ENST00000425444 AGAP20933 346 aa11.87□□□□□ -0.51
SGCE-203ENST00000425444 HNRNPFP52597 415 aaKnown RBP11.87□□□□□ -0.51
SGCE-203ENST00000425444 CASP6P55212 293 aa11.87□□□□□ -0.51
SGCE-203ENST00000425444 HSD17B7P56937 341 aa11.87□□□□□ -0.51
SGCE-203ENST00000425444 STX4Q12846 297 aa11.87□□□□□ -0.51
SGCE-203ENST00000425444 TUBA3CQ13748 450 aa11.87□□□□□ -0.51
SGCE-203ENST00000425444 GTF2H2Q13888 395 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms