RNA–Protein interactions for RNA: ENST00000423918.5

LINC00963-203, long intergenic non-protein coding RNA 963, humanhuman

TSL 2 BASIC

Gene LINC00963, Length 1,654 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-203ENST00000423918 PHF11Q9UIL8 331 aa13.54□□□□□ -0.24
LINC00963-203ENST00000423918 G3BP2Q9UN86 482 aaKnown RBP13.54□□□□□ -0.24
LINC00963-203ENST00000423918 EIF3LQ9Y262 564 aaKnown RBP13.54□□□□□ -0.24
LINC00963-203ENST00000423918 FARSAQ9Y285 508 aaKnown RBP13.54□□□□□ -0.24
LINC00963-203ENST00000423918 PTRH2Q9Y3E5 179 aaKnown RBP13.54□□□□□ -0.24
LINC00963-203ENST00000423918 IGLV3-12A0A075B6K2 115 aa13.53□□□□□ -0.24
LINC00963-203ENST00000423918 E9PBE3 544 aa13.53□□□□□ -0.24
LINC00963-203ENST00000423918 CYR61O00622 381 aa13.53□□□□□ -0.24
LINC00963-203ENST00000423918 PROM1O43490 865 aa13.53□□□□□ -0.24
LINC00963-203ENST00000423918 KLHL41O60662 606 aa13.53□□□□□ -0.24
LINC00963-203ENST00000423918 GUCY1B2O75343 617 aa13.53□□□□□ -0.24
LINC00963-203ENST00000423918 AIFM1O95831 613 aa13.53□□□□□ -0.24
LINC00963-203ENST00000423918 IL3P08700 152 aa13.53□□□□□ -0.24
LINC00963-203ENST00000423918 PRR35P0CG20 571 aa13.53□□□□□ -0.24
LINC00963-203ENST00000423918 BCKDHAP12694 445 aa13.53□□□□□ -0.24
LINC00963-203ENST00000423918 F8A1P23610 371 aa13.53□□□□□ -0.24
LINC00963-203ENST00000423918 MAPK1P28482 360 aa13.53□□□□□ -0.24
LINC00963-203ENST00000423918 TLX1P31314 330 aaPredicted RBP13.53□□□□□ -0.24
LINC00963-203ENST00000423918 BUD31P41223 144 aaPredicted RBP13.53□□□□□ -0.24
LINC00963-203ENST00000423918 ALDH9A1P49189 494 aa13.53□□□□□ -0.24
LINC00963-203ENST00000423918 HNRNPFP52597 415 aaKnown RBP13.53□□□□□ -0.24
LINC00963-203ENST00000423918 DIO3P55073 304 aa13.53□□□□□ -0.24
LINC00963-203ENST00000423918 KLC1Q07866 573 aa13.53□□□□□ -0.24
LINC00963-203ENST00000423918 MAD2L1Q13257 205 aaPredicted RBP13.53□□□□□ -0.24
LINC00963-203ENST00000423918 CLN3Q13286 438 aa13.53□□□□□ -0.24
LINC00963-203ENST00000423918 LSM12Q3MHD2 195 aaKnown RBP13.53□□□□□ -0.24
LINC00963-203ENST00000423918 NDUFAF5Q5TEU4 345 aa13.53□□□□□ -0.24
LINC00963-203ENST00000423918 TMEM198Q66K66 360 aa13.53□□□□□ -0.24
LINC00963-203ENST00000423918 MMP21Q8N119 569 aa13.53□□□□□ -0.24
LINC00963-203ENST00000423918 TMEM132CQ8N3T6 1108 aa13.53□□□□□ -0.24
LINC00963-203ENST00000423918 ZNF248Q8NDW4 579 aa13.53□□□□□ -0.24
LINC00963-203ENST00000423918 CEP70Q8NHQ1 597 aa13.53□□□□□ -0.24
LINC00963-203ENST00000423918 ACTRT2Q8TDY3 377 aa13.53□□□□□ -0.24
LINC00963-203ENST00000423918 KCNE4Q8WWG9 221 aa13.53□□□□□ -0.24
LINC00963-203ENST00000423918 TM4SF18Q96CE8 201 aa13.53□□□□□ -0.24
LINC00963-203ENST00000423918 EGLN2Q96KS0 407 aa13.53□□□□□ -0.24
LINC00963-203ENST00000423918 MARK4Q96L34 752 aa13.53□□□□□ -0.24
LINC00963-203ENST00000423918 OR1F2PQ96R84 312 aa13.53□□□□□ -0.24
LINC00963-203ENST00000423918 SIKE1Q9BRV8 207 aa13.53□□□□□ -0.24
LINC00963-203ENST00000423918 TGIF2Q9GZN2 237 aa13.53□□□□□ -0.24
LINC00963-203ENST00000423918 SLC26A1Q9H2B4 701 aa13.53□□□□□ -0.24
LINC00963-203ENST00000423918 GPN2Q9H9Y4 310 aaPredicted RBP13.53□□□□□ -0.24
LINC00963-203ENST00000423918 KCNK13Q9HB14 408 aa13.53□□□□□ -0.24
LINC00963-203ENST00000423918 NOP53Q9NZM5 478 aaKnown RBP13.53□□□□□ -0.24
LINC00963-203ENST00000423918 MKL2Q9ULH7 1088 aa13.53□□□□□ -0.24
LINC00963-203ENST00000423918 MRPS33Q9Y291 106 aaKnown RBP13.53□□□□□ -0.24
LINC00963-203ENST00000423918 PADI2Q9Y2J8 665 aa13.53□□□□□ -0.24
LINC00963-203ENST00000423918 DMXL2Q8TDJ6 3036 aa13.53□□□□□ -0.24
LINC00963-203ENST00000423918 WASHC1A8K0Z3 465 aa13.53□□□□□ -0.24
LINC00963-203ENST00000423918 C21orf140B9A014 251 aa13.53□□□□□ -0.24
LINC00963-203ENST00000423918 KLK10O43240 276 aa13.53□□□□□ -0.24
LINC00963-203ENST00000423918 LRATO95237 230 aa13.53□□□□□ -0.24
LINC00963-203ENST00000423918 RAB40ALP0C0E4 278 aa13.53□□□□□ -0.24
LINC00963-203ENST00000423918 NR2F6P10588 404 aa13.53□□□□□ -0.24
LINC00963-203ENST00000423918 G6PDP11413 515 aa13.53□□□□□ -0.24
LINC00963-203ENST00000423918 IL10P22301 178 aa13.53□□□□□ -0.24
LINC00963-203ENST00000423918 JAK1P23458 1154 aa13.53□□□□□ -0.24
LINC00963-203ENST00000423918 PTPN4P29074 926 aa13.53□□□□□ -0.24
LINC00963-203ENST00000423918 MC1RQ01726 317 aa13.53□□□□□ -0.24
LINC00963-203ENST00000423918 TNFRSF17Q02223 184 aa13.53□□□□□ -0.24
LINC00963-203ENST00000423918 TUBB8Q3ZCM7 444 aa13.53□□□□□ -0.24
LINC00963-203ENST00000423918 TMEM52Q8NDY8 209 aa13.53□□□□□ -0.24
LINC00963-203ENST00000423918 ADAMTS18Q8TE60 1221 aa13.53□□□□□ -0.24
LINC00963-203ENST00000423918 UCN3Q969E3 161 aa13.53□□□□□ -0.24
LINC00963-203ENST00000423918 GFM2Q969S9 779 aaKnown RBP13.53□□□□□ -0.24
LINC00963-203ENST00000423918 FCRL1Q96LA6 429 aa13.53□□□□□ -0.24
LINC00963-203ENST00000423918 SPSB2Q99619 263 aa13.53□□□□□ -0.24
LINC00963-203ENST00000423918 FAIM2Q9BWQ8 316 aa13.53□□□□□ -0.24
LINC00963-203ENST00000423918 TMEM120AQ9BXJ8 343 aa13.53□□□□□ -0.24
LINC00963-203ENST00000423918 TMEM121BQ9BXQ6 578 aaPredicted RBP13.53□□□□□ -0.24
LINC00963-203ENST00000423918 NSRP1Q9H0G5 558 aaKnown RBP13.53□□□□□ -0.24
LINC00963-203ENST00000423918 ACTL8Q9H568 366 aa13.53□□□□□ -0.24
LINC00963-203ENST00000423918 RPF2Q9H7B2 306 aaKnown RBP13.53□□□□□ -0.24
LINC00963-203ENST00000423918 WDR54Q9H977 334 aa13.53□□□□□ -0.24
LINC00963-203ENST00000423918 WDR41Q9HAD4 459 aa13.53□□□□□ -0.24
LINC00963-203ENST00000423918 C14orf105Q9NVL8 296 aa13.53□□□□□ -0.24
LINC00963-203ENST00000423918 IL17BQ9UHF5 180 aa13.53□□□□□ -0.24
LINC00963-203ENST00000423918 NXT1Q9UKK6 140 aaKnown RBP13.53□□□□□ -0.24
LINC00963-203ENST00000423918 TCFL5Q9UL49 500 aa13.53□□□□□ -0.24
LINC00963-203ENST00000423918 MRPS18BQ9Y676 258 aaKnown RBP13.53□□□□□ -0.24
LINC00963-203ENST00000423918 CROCCQ5TZA2 2017 aa13.52□□□□□ -0.25
LINC00963-203ENST00000423918 VSTM2BA6NLU5 285 aa13.52□□□□□ -0.25
LINC00963-203ENST00000423918 CLDN4O14493 209 aa13.52□□□□□ -0.25
LINC00963-203ENST00000423918 TERTO14746 1132 aaKnown RBP13.52□□□□□ -0.25
LINC00963-203ENST00000423918 PGRMC2O15173 223 aa13.52□□□□□ -0.25
LINC00963-203ENST00000423918 KLF7O75840 302 aaPredicted RBP13.52□□□□□ -0.25
LINC00963-203ENST00000423918 HEXBP07686 556 aa13.52□□□□□ -0.25
LINC00963-203ENST00000423918 CD63P08962 238 aa13.52□□□□□ -0.25
LINC00963-203ENST00000423918 ALDOCP09972 364 aaKnown RBP13.52□□□□□ -0.25
LINC00963-203ENST00000423918 LIFP15018 202 aa13.52□□□□□ -0.25
LINC00963-203ENST00000423918 DRD4P21917 467 aa13.52□□□□□ -0.25
LINC00963-203ENST00000423918 FOLR3P41439 243 aa13.52□□□□□ -0.25
LINC00963-203ENST00000423918 ARFIP2P53365 341 aa13.52□□□□□ -0.25
LINC00963-203ENST00000423918 TRA2BP62995 288 aaKnown RBP13.52□□□□□ -0.25
LINC00963-203ENST00000423918 BTG2P78543 158 aa13.52□□□□□ -0.25
LINC00963-203ENST00000423918 C2orf80Q0P641 193 aa13.52□□□□□ -0.25
LINC00963-203ENST00000423918 SLC13A2Q13183 592 aa13.52□□□□□ -0.25
LINC00963-203ENST00000423918 SRSF6Q13247 344 aaKnown RBP13.52□□□□□ -0.25
LINC00963-203ENST00000423918 PTGR1Q14914 329 aa13.52□□□□□ -0.25
LINC00963-203ENST00000423918 HEPACAMQ14CZ8 416 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms