RNA–Protein interactions for RNA: ENST00000423701.6

SEC22C-207, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 1 (best) BASIC

Gene SEC22C, Length 1,458 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-207ENST00000423701 NSDHLQ15738 373 aa20.37■□□□□ 0.85
SEC22C-207ENST00000423701 IMPG1Q17R60 797 aa20.37■□□□□ 0.85
SEC22C-207ENST00000423701 DCAF10Q5QP82 559 aa20.37■□□□□ 0.85
SEC22C-207ENST00000423701 RNF165Q6ZSG1 346 aa20.37■□□□□ 0.85
SEC22C-207ENST00000423701 SCUBE1Q8IWY4 988 aa20.37■□□□□ 0.85
SEC22C-207ENST00000423701 ZNF595Q8IYB9 648 aa20.37■□□□□ 0.85
SEC22C-207ENST00000423701 CHTF18Q8WVB6 975 aa20.37■□□□□ 0.85
SEC22C-207ENST00000423701 TWIST2Q8WVJ9 160 aa20.37■□□□□ 0.85
SEC22C-207ENST00000423701 APIPQ96GX9 242 aa20.37■□□□□ 0.85
SEC22C-207ENST00000423701 PTCHD1Q96NR3 888 aa20.37■□□□□ 0.85
SEC22C-207ENST00000423701 SORT1Q99523 831 aa20.37■□□□□ 0.85
SEC22C-207ENST00000423701 PRDM9Q9NQV7 894 aa20.37■□□□□ 0.85
SEC22C-207ENST00000423701 MS4A12Q9NXJ0 267 aa20.37■□□□□ 0.85
SEC22C-207ENST00000423701 MMACHCQ9Y4U1 282 aa20.37■□□□□ 0.85
SEC22C-207ENST00000423701 CCL27Q9Y4X3 112 aa20.37■□□□□ 0.85
SEC22C-207ENST00000423701 ASB4Q9Y574 426 aa20.37■□□□□ 0.85
SEC22C-207ENST00000423701 CACNA1BQ00975 2339 aa20.37■□□□□ 0.85
SEC22C-207ENST00000423701 IGKV3D-11A0A0A0MRZ8 115 aa20.37■□□□□ 0.85
SEC22C-207ENST00000423701 ARHGAP10A1A4S6 786 aa20.37■□□□□ 0.85
SEC22C-207ENST00000423701 MASP2O00187 686 aa20.37■□□□□ 0.85
SEC22C-207ENST00000423701 COX6A1P12074 109 aa20.37■□□□□ 0.85
SEC22C-207ENST00000423701 TNFRSF17Q02223 184 aa20.37■□□□□ 0.85
SEC22C-207ENST00000423701 LINC00303Q3SY05 128 aa20.37■□□□□ 0.85
SEC22C-207ENST00000423701 SPIN4Q56A73 249 aa20.37■□□□□ 0.85
SEC22C-207ENST00000423701 CCNYL2Q5T2Q4 361 aa20.37■□□□□ 0.85
SEC22C-207ENST00000423701 ANKRD37Q7Z713 158 aa20.37■□□□□ 0.85
SEC22C-207ENST00000423701 APLFQ8IW19 511 aaPredicted RBP20.37■□□□□ 0.85
SEC22C-207ENST00000423701 ZNF781Q8N8C0 355 aa20.37■□□□□ 0.85
SEC22C-207ENST00000423701 TMEM102Q8N9M5 508 aaPredicted RBP20.37■□□□□ 0.85
SEC22C-207ENST00000423701 VPS50Q96JG6 964 aa20.37■□□□□ 0.85
SEC22C-207ENST00000423701 FER1L6-AS2Q96M78 137 aa20.37■□□□□ 0.85
SEC22C-207ENST00000423701 TRIM55Q9BYV6 548 aa20.37■□□□□ 0.85
SEC22C-207ENST00000423701 ING2Q9H160 280 aa20.37■□□□□ 0.85
SEC22C-207ENST00000423701 NECTIN3Q9NQS3 549 aa20.37■□□□□ 0.85
SEC22C-207ENST00000423701 PRTFDC1Q9NRG1 225 aa20.37■□□□□ 0.85
SEC22C-207ENST00000423701 ATMQ13315 3056 aa20.37■□□□□ 0.85
SEC22C-207ENST00000423701 SCN2AQ99250 2005 aa20.36■□□□□ 0.85
SEC22C-207ENST00000423701 IGHV1-45A0A0A0MS14 117 aa20.36■□□□□ 0.85
SEC22C-207ENST00000423701 CLDN4O14493 209 aa20.36■□□□□ 0.85
SEC22C-207ENST00000423701 DNAJB5O75953 348 aa20.36■□□□□ 0.85
SEC22C-207ENST00000423701 RSL1D1O76021 490 aaKnown RBP20.36■□□□□ 0.85
SEC22C-207ENST00000423701 MAPK12P53778 367 aa20.36■□□□□ 0.85
SEC22C-207ENST00000423701 RRADP55042 308 aa20.36■□□□□ 0.85
SEC22C-207ENST00000423701 HSD17B7P56937 341 aa20.36■□□□□ 0.85
SEC22C-207ENST00000423701 PPP2R2AP63151 447 aa20.36■□□□□ 0.85
SEC22C-207ENST00000423701 SPDYAQ5MJ70 313 aa20.36■□□□□ 0.85
SEC22C-207ENST00000423701 C18orf63Q68DL7 685 aa20.36■□□□□ 0.85
SEC22C-207ENST00000423701 HOMEZQ8IX15 550 aa20.36■□□□□ 0.85
SEC22C-207ENST00000423701 RAB3IL1Q8TBN0 382 aa20.36■□□□□ 0.85
SEC22C-207ENST00000423701 C11orf24Q96F05 449 aaPredicted RBP20.36■□□□□ 0.85
SEC22C-207ENST00000423701 C19orf25Q9UFG5 118 aaPredicted RBP20.36■□□□□ 0.85
SEC22C-207ENST00000423701 RAP2CQ9Y3L5 183 aa20.36■□□□□ 0.85
SEC22C-207ENST00000423701 CLDN16Q9Y5I7 305 aa20.36■□□□□ 0.85
SEC22C-207ENST00000423701 IGHV3-20A0A0C4DH32 117 aa20.35■□□□□ 0.85
SEC22C-207ENST00000423701 A0A1W2PR48 441 aa20.35■□□□□ 0.85
SEC22C-207ENST00000423701 TGFBR3LH3BV60 316 aa20.35■□□□□ 0.85
SEC22C-207ENST00000423701 PIP5K1BO14986 540 aa20.35■□□□□ 0.85
SEC22C-207ENST00000423701 PROM1O43490 865 aa20.35■□□□□ 0.85
SEC22C-207ENST00000423701 PRKRAO75569 313 aaKnown RBP20.35■□□□□ 0.85
SEC22C-207ENST00000423701 SNUPNO95149 360 aaKnown RBP20.35■□□□□ 0.85
SEC22C-207ENST00000423701 LINC00032P0C843 101 aa20.35■□□□□ 0.85
SEC22C-207ENST00000423701 BUD31P41223 144 aaPredicted RBP20.35■□□□□ 0.85
SEC22C-207ENST00000423701 POLE2P56282 527 aa20.35■□□□□ 0.85
SEC22C-207ENST00000423701 BTKQ06187 659 aa20.35■□□□□ 0.85
SEC22C-207ENST00000423701 ACSM2AQ08AH3 577 aa20.35■□□□□ 0.85
SEC22C-207ENST00000423701 SLC13A2Q13183 592 aa20.35■□□□□ 0.85
SEC22C-207ENST00000423701 PCOLCEQ15113 449 aa20.35■□□□□ 0.85
SEC22C-207ENST00000423701 ACSM2BQ68CK6 577 aa20.35■□□□□ 0.85
SEC22C-207ENST00000423701 CPEB2Q7Z5Q1 589 aaKnown RBP20.35■□□□□ 0.85
SEC22C-207ENST00000423701 CLNKQ7Z7G1 428 aa20.35■□□□□ 0.85
SEC22C-207ENST00000423701 DDIASQ8IXT1 998 aa20.35■□□□□ 0.85
SEC22C-207ENST00000423701 OR2T11Q8NH01 316 aa20.35■□□□□ 0.85
SEC22C-207ENST00000423701 ZNF700Q9H0M5 742 aa20.35■□□□□ 0.85
SEC22C-207ENST00000423701 TEX10Q9NXF1 929 aaPredicted RBP20.35■□□□□ 0.85
SEC22C-207ENST00000423701 TCRBV16S1A1N1A0A5B0 115 aa20.34■□□□□ 0.85
SEC22C-207ENST00000423701 BLACEA4D250 179 aa20.34■□□□□ 0.85
SEC22C-207ENST00000423701 ERVH48-1M5A8F1 160 aa20.34■□□□□ 0.85
SEC22C-207ENST00000423701 SLC28A1O00337 649 aa20.34■□□□□ 0.85
SEC22C-207ENST00000423701 RGS14O43566 566 aa20.34■□□□□ 0.85
SEC22C-207ENST00000423701 PCDH7O60245 1069 aa20.34■□□□□ 0.85
SEC22C-207ENST00000423701 AIFM1O95831 613 aa20.34■□□□□ 0.85
SEC22C-207ENST00000423701 HPP00738 406 aa20.34■□□□□ 0.85
SEC22C-207ENST00000423701 NR2F6P10588 404 aa20.34■□□□□ 0.85
SEC22C-207ENST00000423701 RAE1P78406 368 aaKnown RBP20.34■□□□□ 0.85
SEC22C-207ENST00000423701 Q6ZSR9 355 aa20.34■□□□□ 0.85
SEC22C-207ENST00000423701 TRIM42Q8IWZ5 723 aa20.34■□□□□ 0.85
SEC22C-207ENST00000423701 CLEC1AQ8NC01 280 aa20.34■□□□□ 0.85
SEC22C-207ENST00000423701 ILKAPQ9H0C8 392 aaPredicted RBP20.34■□□□□ 0.85
SEC22C-207ENST00000423701 RPF2Q9H7B2 306 aaKnown RBP20.34■□□□□ 0.85
SEC22C-207ENST00000423701 ZNF160Q9HCG1 818 aa20.34■□□□□ 0.85
SEC22C-207ENST00000423701 MCM8Q9UJA3 840 aa20.34■□□□□ 0.85
SEC22C-207ENST00000423701 HAO1Q9UJM8 370 aa20.34■□□□□ 0.85
SEC22C-207ENST00000423701 EPB41L3Q9Y2J2 1087 aaPredicted RBP20.34■□□□□ 0.85
SEC22C-207ENST00000423701 NSG1A0A0A6YYJ2 146 aa20.33■□□□□ 0.85
SEC22C-207ENST00000423701 NPIPB8E9PQR5 432 aa20.33■□□□□ 0.85
SEC22C-207ENST00000423701 CTNSO60931 367 aa20.33■□□□□ 0.85
SEC22C-207ENST00000423701 SKAP2O75563 359 aaPredicted RBP20.33■□□□□ 0.85
SEC22C-207ENST00000423701 PRPH2P23942 346 aa20.33■□□□□ 0.85
SEC22C-207ENST00000423701 TLX1P31314 330 aaPredicted RBP20.33■□□□□ 0.85
SEC22C-207ENST00000423701 TIA1P31483 386 aaKnown RBP eCLIP20.33■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms