RNA–Protein interactions for RNA: ENST00000422991.1

COL7A1-202, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-202ENST00000422991 SCN2AQ99250 2005 aa16.02■□□□□ 0.15
COL7A1-202ENST00000422991 URB1O60287 2271 aaKnown RBP16.01■□□□□ 0.15
COL7A1-202ENST00000422991 GNG14A0A1W2PPG7 69 aa16.01■□□□□ 0.15
COL7A1-202ENST00000422991 FAM227AF5H4B4 570 aa16.01■□□□□ 0.15
COL7A1-202ENST00000422991 KLK10O43240 276 aa16.01■□□□□ 0.15
COL7A1-202ENST00000422991 VPS4BO75351 444 aa16.01■□□□□ 0.15
COL7A1-202ENST00000422991 MYO1DO94832 1006 aa16.01■□□□□ 0.15
COL7A1-202ENST00000422991 TGDSO95455 350 aa16.01■□□□□ 0.15
COL7A1-202ENST00000422991 UMODP07911 640 aa16.01■□□□□ 0.15
COL7A1-202ENST00000422991 ANXA4P09525 319 aaPredicted RBP16.01■□□□□ 0.15
COL7A1-202ENST00000422991 ACPPP15309 386 aa16.01■□□□□ 0.15
COL7A1-202ENST00000422991 CPN2P22792 545 aa16.01■□□□□ 0.15
COL7A1-202ENST00000422991 JAK1P23458 1154 aa16.01■□□□□ 0.15
COL7A1-202ENST00000422991 FOLR3P41439 243 aa16.01■□□□□ 0.15
COL7A1-202ENST00000422991 EFNA3P52797 238 aa16.01■□□□□ 0.15
COL7A1-202ENST00000422991 TRA2BP62995 288 aaKnown RBP16.01■□□□□ 0.15
COL7A1-202ENST00000422991 KLC1Q07866 573 aa16.01■□□□□ 0.15
COL7A1-202ENST00000422991 SMU1Q2TAY7 513 aa16.01■□□□□ 0.15
COL7A1-202ENST00000422991 TUBB8Q3ZCM7 444 aa16.01■□□□□ 0.15
COL7A1-202ENST00000422991 SHISA6Q6ZSJ9 500 aa16.01■□□□□ 0.15
COL7A1-202ENST00000422991 SPACA3Q8IXA5 215 aa16.01■□□□□ 0.15
COL7A1-202ENST00000422991 LRRC34Q8IZ02 419 aa16.01■□□□□ 0.15
COL7A1-202ENST00000422991 TMEM52Q8NDY8 209 aa16.01■□□□□ 0.15
COL7A1-202ENST00000422991 MAELQ96JY0 434 aaKnown RBP16.01■□□□□ 0.15
COL7A1-202ENST00000422991 ZNF317Q96PQ6 595 aaPredicted RBP16.01■□□□□ 0.15
COL7A1-202ENST00000422991 FGFR1OP2Q9NVK5 253 aa16.01■□□□□ 0.15
COL7A1-202ENST00000422991 WDR70Q9NW82 654 aa16.01■□□□□ 0.15
COL7A1-202ENST00000422991 TEX10Q9NXF1 929 aaPredicted RBP16.01■□□□□ 0.15
COL7A1-202ENST00000422991 MS4A12Q9NXJ0 267 aa16.01■□□□□ 0.15
COL7A1-202ENST00000422991 MRPS18BQ9Y676 258 aaKnown RBP16.01■□□□□ 0.15
COL7A1-202ENST00000422991 ITPR1Q14643 2758 aa16.01■□□□□ 0.15
COL7A1-202ENST00000422991 A0A087WV48 116 aa16■□□□□ 0.15
COL7A1-202ENST00000422991 A0A1W2PR48 441 aa16■□□□□ 0.15
COL7A1-202ENST00000422991 POLR3GO15318 223 aaPredicted RBP16■□□□□ 0.15
COL7A1-202ENST00000422991 PROM1O43490 865 aa16■□□□□ 0.15
COL7A1-202ENST00000422991 CDC123O75794 336 aaPredicted RBP16■□□□□ 0.15
COL7A1-202ENST00000422991 AIFM1O95831 613 aa16■□□□□ 0.15
COL7A1-202ENST00000422991 VIMP08670 466 aaKnown RBP16■□□□□ 0.15
COL7A1-202ENST00000422991 NR2F6P10588 404 aa16■□□□□ 0.15
COL7A1-202ENST00000422991 SDC1P18827 310 aa16■□□□□ 0.15
COL7A1-202ENST00000422991 EPHA3P29320 983 aa16■□□□□ 0.15
COL7A1-202ENST00000422991 BUD31P41223 144 aaPredicted RBP16■□□□□ 0.15
COL7A1-202ENST00000422991 HNRNPFP52597 415 aaKnown RBP16■□□□□ 0.15
COL7A1-202ENST00000422991 ZNF763Q0D2J5 394 aa16■□□□□ 0.15
COL7A1-202ENST00000422991 ERV3-1Q14264 604 aa16■□□□□ 0.15
COL7A1-202ENST00000422991 SLC9B1Q4ZJI4 515 aa16■□□□□ 0.15
COL7A1-202ENST00000422991 C18orf63Q68DL7 685 aa16■□□□□ 0.15
COL7A1-202ENST00000422991 EPGNQ6UW88 154 aa16■□□□□ 0.15
COL7A1-202ENST00000422991 LARP4Q71RC2 724 aaKnown RBP eCLIP16■□□□□ 0.15
COL7A1-202ENST00000422991 LAPTM4BQ86VI4 370 aa16■□□□□ 0.15
COL7A1-202ENST00000422991 ZNF595Q8IYB9 648 aa16■□□□□ 0.15
COL7A1-202ENST00000422991 FNDC5Q8NAU1 212 aa16■□□□□ 0.15
COL7A1-202ENST00000422991 C16orf78Q8WTQ4 265 aa16■□□□□ 0.15
COL7A1-202ENST00000422991 TM4SF18Q96CE8 201 aa16■□□□□ 0.15
COL7A1-202ENST00000422991 SLC45A3Q96JT2 553 aa16■□□□□ 0.15
COL7A1-202ENST00000422991 CRB3Q9BUF7 120 aa16■□□□□ 0.15
COL7A1-202ENST00000422991 C1orf50Q9BV19 199 aa16■□□□□ 0.15
COL7A1-202ENST00000422991 VN1R1Q9GZP7 353 aa16■□□□□ 0.15
COL7A1-202ENST00000422991 WDR55Q9H6Y2 383 aaPredicted RBP16■□□□□ 0.15
COL7A1-202ENST00000422991 MRPS33Q9Y291 106 aaKnown RBP16■□□□□ 0.15
COL7A1-202ENST00000422991 NBEAQ8NFP9 2946 aa16■□□□□ 0.15
COL7A1-202ENST00000422991 GOLGA8QA0A0J9YX86 632 aa15.99■□□□□ 0.15
COL7A1-202ENST00000422991 BLACEA4D250 179 aa15.99■□□□□ 0.15
COL7A1-202ENST00000422991 GOLGA8OA6NCC3 632 aa15.99■□□□□ 0.15
COL7A1-202ENST00000422991 IDSB3KWA1 339 aa15.99■□□□□ 0.15
COL7A1-202ENST00000422991 GOLGA8NF8WBI6 632 aa15.99■□□□□ 0.15
COL7A1-202ENST00000422991 RRP8O43159 456 aaKnown RBP15.99■□□□□ 0.15
COL7A1-202ENST00000422991 DIAPH2O60879 1101 aa15.99■□□□□ 0.15
COL7A1-202ENST00000422991 B4GALT2O60909 372 aa15.99■□□□□ 0.15
COL7A1-202ENST00000422991 GUCY1B2O75343 617 aa15.99■□□□□ 0.15
COL7A1-202ENST00000422991 PRKRAO75569 313 aaKnown RBP15.99■□□□□ 0.15
COL7A1-202ENST00000422991 RECKO95980 971 aa15.99■□□□□ 0.15
COL7A1-202ENST00000422991 CYC1P08574 325 aa15.99■□□□□ 0.15
COL7A1-202ENST00000422991 BCKDHAP12694 445 aa15.99■□□□□ 0.15
COL7A1-202ENST00000422991 WT1P19544 449 aaPredicted RBP15.99■□□□□ 0.15
COL7A1-202ENST00000422991 TACR1P25103 407 aa15.99■□□□□ 0.15
COL7A1-202ENST00000422991 MAPK1P28482 360 aa15.99■□□□□ 0.15
COL7A1-202ENST00000422991 GSTM5P46439 218 aa15.99■□□□□ 0.15
COL7A1-202ENST00000422991 AQP5P55064 265 aa15.99■□□□□ 0.15
COL7A1-202ENST00000422991 TAS2R50P59544 299 aa15.99■□□□□ 0.15
COL7A1-202ENST00000422991 ERVK-8P63133 956 aa15.99■□□□□ 0.15
COL7A1-202ENST00000422991 RHAGQ02094 409 aa15.99■□□□□ 0.15
COL7A1-202ENST00000422991 EMX2Q04743 252 aa15.99■□□□□ 0.15
COL7A1-202ENST00000422991 IL10RAQ13651 578 aa15.99■□□□□ 0.15
COL7A1-202ENST00000422991 MINDY4Q4G0A6 757 aa15.99■□□□□ 0.15
COL7A1-202ENST00000422991 NDUFAF5Q5TEU4 345 aa15.99■□□□□ 0.15
COL7A1-202ENST00000422991 MFSD4BQ5TF39 518 aa15.99■□□□□ 0.15
COL7A1-202ENST00000422991 OGFOD2Q6N063 350 aa15.99■□□□□ 0.15
COL7A1-202ENST00000422991 CGB2Q6NT52 195 aa15.99■□□□□ 0.15
COL7A1-202ENST00000422991 QSOX2Q6ZRP7 698 aa15.99■□□□□ 0.15
COL7A1-202ENST00000422991 SCUBE1Q8IWY4 988 aa15.99■□□□□ 0.15
COL7A1-202ENST00000422991 PUM2Q8TB72 1066 aaKnown RBP eCLIP15.99■□□□□ 0.15
COL7A1-202ENST00000422991 ACTRT2Q8TDY3 377 aa15.99■□□□□ 0.15
COL7A1-202ENST00000422991 STARD8Q92502 1023 aa15.99■□□□□ 0.15
COL7A1-202ENST00000422991 DCBLD2Q96PD2 775 aa15.99■□□□□ 0.15
COL7A1-202ENST00000422991 CCNL2Q96S94 520 aaPredicted RBP15.99■□□□□ 0.15
COL7A1-202ENST00000422991 NPHS2Q9NP85 383 aa15.99■□□□□ 0.15
COL7A1-202ENST00000422991 MYNNQ9NPC7 610 aa15.99■□□□□ 0.15
COL7A1-202ENST00000422991 ASIC5Q9NY37 505 aa15.99■□□□□ 0.15
COL7A1-202ENST00000422991 C3orf18Q9UK00 162 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms