RNA–Protein interactions for RNA: ENST00000421712.1

BRAT1-202, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 3

Gene BRAT1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-202ENST00000421712 METTL4Q8N3J2 472 aa14.81□□□□□ -0.04
BRAT1-202ENST00000421712 ZCCHC7Q8N3Z6 543 aaKnown RBP14.81□□□□□ -0.04
BRAT1-202ENST00000421712 GALNT16Q8N428 558 aa14.81□□□□□ -0.04
BRAT1-202ENST00000421712 GBP7Q8N8V2 638 aaPredicted RBP14.81□□□□□ -0.04
BRAT1-202ENST00000421712 C9orf43Q8TAL5 461 aaPredicted RBP14.81□□□□□ -0.04
BRAT1-202ENST00000421712 AGR3Q8TD06 166 aa14.81□□□□□ -0.04
BRAT1-202ENST00000421712 ARL8AQ96BM9 186 aa14.81□□□□□ -0.04
BRAT1-202ENST00000421712 ABHD17AQ96GS6 310 aa14.81□□□□□ -0.04
BRAT1-202ENST00000421712 ZNF700Q9H0M5 742 aa14.81□□□□□ -0.04
BRAT1-202ENST00000421712 NECTIN3Q9NQS3 549 aa14.81□□□□□ -0.04
BRAT1-202ENST00000421712 ZNF71Q9NQZ8 489 aaPredicted RBP14.81□□□□□ -0.04
BRAT1-202ENST00000421712 RIC8BQ9NVN3 520 aa14.81□□□□□ -0.04
BRAT1-202ENST00000421712 LYARQ9NX58 379 aaKnown RBP14.81□□□□□ -0.04
BRAT1-202ENST00000421712 A0A0A6YYD5 115 aa14.8□□□□□ -0.04
BRAT1-202ENST00000421712 A8MUA0 341 aa14.8□□□□□ -0.04
BRAT1-202ENST00000421712 CYR61O00622 381 aa14.8□□□□□ -0.04
BRAT1-202ENST00000421712 TMPRSS11DO60235 418 aa14.8□□□□□ -0.04
BRAT1-202ENST00000421712 ICAM2P13598 275 aa14.8□□□□□ -0.04
BRAT1-202ENST00000421712 SERPINB5P36952 375 aa14.8□□□□□ -0.04
BRAT1-202ENST00000421712 BUD31P41223 144 aaPredicted RBP14.8□□□□□ -0.04
BRAT1-202ENST00000421712 HNRNPFP52597 415 aaKnown RBP14.8□□□□□ -0.04
BRAT1-202ENST00000421712 MAPK12P53778 367 aa14.8□□□□□ -0.04
BRAT1-202ENST00000421712 HNRNPH2P55795 449 aaKnown RBP14.8□□□□□ -0.04
BRAT1-202ENST00000421712 HSD17B7P56937 341 aa14.8□□□□□ -0.04
BRAT1-202ENST00000421712 ZNF33BQ06732 778 aa14.8□□□□□ -0.04
BRAT1-202ENST00000421712 STX4Q12846 297 aa14.8□□□□□ -0.04
BRAT1-202ENST00000421712 PCOLCEQ15113 449 aa14.8□□□□□ -0.04
BRAT1-202ENST00000421712 SH2D4BQ5SQS7 431 aa14.8□□□□□ -0.04
BRAT1-202ENST00000421712 C18orf63Q68DL7 685 aa14.8□□□□□ -0.04
BRAT1-202ENST00000421712 PCSK4Q6UW60 755 aa14.8□□□□□ -0.04
BRAT1-202ENST00000421712 COMMD6Q7Z4G1 85 aa14.8□□□□□ -0.04
BRAT1-202ENST00000421712 KBTBD2Q8IY47 623 aa14.8□□□□□ -0.04
BRAT1-202ENST00000421712 C1orf52Q8N6N3 182 aaKnown RBP14.8□□□□□ -0.04
BRAT1-202ENST00000421712 LSM14AQ8ND56 463 aaKnown RBP14.8□□□□□ -0.04
BRAT1-202ENST00000421712 TMEM52Q8NDY8 209 aa14.8□□□□□ -0.04
BRAT1-202ENST00000421712 FDCSPQ8NFU4 85 aa14.8□□□□□ -0.04
BRAT1-202ENST00000421712 TLCD1Q96CP7 247 aa14.8□□□□□ -0.04
BRAT1-202ENST00000421712 THOC3Q96J01 351 aaKnown RBP14.8□□□□□ -0.04
BRAT1-202ENST00000421712 LPAR4Q99677 370 aa14.8□□□□□ -0.04
BRAT1-202ENST00000421712 TUBB6Q9BUF5 446 aa14.8□□□□□ -0.04
BRAT1-202ENST00000421712 ZNF717Q9BY31 904 aaPredicted RBP14.8□□□□□ -0.04
BRAT1-202ENST00000421712 ACPTQ9BZG2 426 aa14.8□□□□□ -0.04
BRAT1-202ENST00000421712 VIPAS39Q9H9C1 493 aa14.8□□□□□ -0.04
BRAT1-202ENST00000421712 WDR41Q9HAD4 459 aa14.8□□□□□ -0.04
BRAT1-202ENST00000421712 TNFRSF12AQ9NP84 129 aa14.8□□□□□ -0.04
BRAT1-202ENST00000421712 PNO1Q9NRX1 252 aaKnown RBP14.8□□□□□ -0.04
BRAT1-202ENST00000421712 GPR83Q9NYM4 423 aa14.8□□□□□ -0.04
BRAT1-202ENST00000421712 TUBD1Q9UJT1 453 aa14.8□□□□□ -0.04
BRAT1-202ENST00000421712 ADAM29Q9UKF5 820 aa14.8□□□□□ -0.04
BRAT1-202ENST00000421712 ATG4BQ9Y4P1 393 aa14.8□□□□□ -0.04
BRAT1-202ENST00000421712 MYOCOSA0A1B0GUC4 107 aa14.79□□□□□ -0.04
BRAT1-202ENST00000421712 BLACEA4D250 179 aa14.79□□□□□ -0.04
BRAT1-202ENST00000421712 CTNSO60931 367 aa14.79□□□□□ -0.04
BRAT1-202ENST00000421712 HSPA4LO95757 839 aa14.79□□□□□ -0.04
BRAT1-202ENST00000421712 IFNA16P05015 189 aa14.79□□□□□ -0.04
BRAT1-202ENST00000421712 SERPINE1P05121 402 aa14.79□□□□□ -0.04
BRAT1-202ENST00000421712 PGDP52209 483 aa14.79□□□□□ -0.04
BRAT1-202ENST00000421712 ACSM2AQ08AH3 577 aa14.79□□□□□ -0.04
BRAT1-202ENST00000421712 BTBD16Q32M84 506 aa14.79□□□□□ -0.04
BRAT1-202ENST00000421712 NUP210LQ5VU65 1888 aa14.79□□□□□ -0.04
BRAT1-202ENST00000421712 ACSM2BQ68CK6 577 aa14.79□□□□□ -0.04
BRAT1-202ENST00000421712 PAPD4Q6PIY7 484 aaKnown RBP14.79□□□□□ -0.04
BRAT1-202ENST00000421712 CLYBLQ8N0X4 340 aa14.79□□□□□ -0.04
BRAT1-202ENST00000421712 PCSK5Q92824 1860 aa14.79□□□□□ -0.04
BRAT1-202ENST00000421712 SLC25A18Q9H1K4 315 aa14.79□□□□□ -0.04
BRAT1-202ENST00000421712 RPF2Q9H7B2 306 aaKnown RBP14.79□□□□□ -0.04
BRAT1-202ENST00000421712 TRAF6Q9Y4K3 522 aa14.79□□□□□ -0.04
BRAT1-202ENST00000421712 UQCRHLA0A096LP55 91 aa14.78□□□□□ -0.04
BRAT1-202ENST00000421712 SLC28A1O00337 649 aa14.78□□□□□ -0.04
BRAT1-202ENST00000421712 PROM1O43490 865 aa14.78□□□□□ -0.04
BRAT1-202ENST00000421712 KLHL41O60662 606 aa14.78□□□□□ -0.04
BRAT1-202ENST00000421712 LDB3O75112 727 aa14.78□□□□□ -0.04
BRAT1-202ENST00000421712 GUCY1B2O75343 617 aa14.78□□□□□ -0.04
BRAT1-202ENST00000421712 PRKRAO75569 313 aaKnown RBP14.78□□□□□ -0.04
BRAT1-202ENST00000421712 DHRS4L1P0CG22 281 aa14.78□□□□□ -0.04
BRAT1-202ENST00000421712 NR2F6P10588 404 aa14.78□□□□□ -0.04
BRAT1-202ENST00000421712 TNNI3P19429 210 aa14.78□□□□□ -0.04
BRAT1-202ENST00000421712 BGNP21810 368 aa14.78□□□□□ -0.04
BRAT1-202ENST00000421712 TPP2P29144 1249 aaPredicted RBP14.78□□□□□ -0.04
BRAT1-202ENST00000421712 ABCE1P61221 599 aaKnown RBP14.78□□□□□ -0.04
BRAT1-202ENST00000421712 AP2B1P63010 937 aa14.78□□□□□ -0.04
BRAT1-202ENST00000421712 TNFRSF17Q02223 184 aa14.78□□□□□ -0.04
BRAT1-202ENST00000421712 ID2Q02363 134 aa14.78□□□□□ -0.04
BRAT1-202ENST00000421712 GALNT1Q10472 559 aaPredicted RBP14.78□□□□□ -0.04
BRAT1-202ENST00000421712 TBL3Q12788 808 aaKnown RBP14.78□□□□□ -0.04
BRAT1-202ENST00000421712 STX3Q13277 289 aa14.78□□□□□ -0.04
BRAT1-202ENST00000421712 MYBPC3Q14896 1274 aa14.78□□□□□ -0.04
BRAT1-202ENST00000421712 LACTB2Q53H82 288 aaPredicted RBP14.78□□□□□ -0.04
BRAT1-202ENST00000421712 SPIN4Q56A73 249 aa14.78□□□□□ -0.04
BRAT1-202ENST00000421712 HOMEZQ8IX15 550 aa14.78□□□□□ -0.04
BRAT1-202ENST00000421712 OR4N5Q8IXE1 308 aa14.78□□□□□ -0.04
BRAT1-202ENST00000421712 DDIASQ8IXT1 998 aa14.78□□□□□ -0.04
BRAT1-202ENST00000421712 CHTF18Q8WVB6 975 aa14.78□□□□□ -0.04
BRAT1-202ENST00000421712 TANKQ92844 425 aa14.78□□□□□ -0.04
BRAT1-202ENST00000421712 APIPQ96GX9 242 aa14.78□□□□□ -0.04
BRAT1-202ENST00000421712 ATP6V1G3Q96LB4 118 aa14.78□□□□□ -0.04
BRAT1-202ENST00000421712 BBC3Q96PG8 261 aaPredicted RBP14.78□□□□□ -0.04
BRAT1-202ENST00000421712 ALOXE3Q9BYJ1 711 aa14.78□□□□□ -0.04
BRAT1-202ENST00000421712 SEMA4CQ9C0C4 833 aa14.78□□□□□ -0.04
BRAT1-202ENST00000421712 LHPPQ9H008 270 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms