RNA–Protein interactions for RNA: ENST00000421459.2

VIM-202, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 753 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-202ENST00000421459 KLK2P20151 261 aa7.49□□□□□ -1.21
VIM-202ENST00000421459 CD22P20273 847 aa7.49□□□□□ -1.21
VIM-202ENST00000421459 IVDP26440 423 aa7.49□□□□□ -1.21
VIM-202ENST00000421459 ZFP36L2P47974 494 aaKnown RBP7.49□□□□□ -1.21
VIM-202ENST00000421459 SLC6A12P48065 614 aa7.49□□□□□ -1.21
VIM-202ENST00000421459 TRPC1P48995 793 aa7.49□□□□□ -1.21
VIM-202ENST00000421459 HSD17B7P56937 341 aa7.49□□□□□ -1.21
VIM-202ENST00000421459 TAS2R39P59534 338 aa7.49□□□□□ -1.21
VIM-202ENST00000421459 STXBP1P61764 594 aaKnown RBP7.49□□□□□ -1.21
VIM-202ENST00000421459 RNF4P78317 190 aa7.49□□□□□ -1.21
VIM-202ENST00000421459 ASPHQ12797 758 aa7.49□□□□□ -1.21
VIM-202ENST00000421459 SLC10A1Q14973 349 aa7.49□□□□□ -1.21
VIM-202ENST00000421459 FASTKD3Q14CZ7 662 aaKnown RBP7.49□□□□□ -1.21
VIM-202ENST00000421459 PPP1R7Q15435 360 aa7.49□□□□□ -1.21
VIM-202ENST00000421459 TERF2Q15554 542 aa7.49□□□□□ -1.21
VIM-202ENST00000421459 ELAVL1Q15717 326 aaKnown RBP7.49□□□□□ -1.21
VIM-202ENST00000421459 KRTAP21-3Q3LHN1 58 aa7.49□□□□□ -1.21
VIM-202ENST00000421459 PRAMEF20Q5VT98 475 aa7.49□□□□□ -1.21
VIM-202ENST00000421459 ABHD17CQ6PCB6 329 aa7.49□□□□□ -1.21
VIM-202ENST00000421459 PAOXQ6QHF9 649 aa7.49□□□□□ -1.21
VIM-202ENST00000421459 ADGRD1Q6QNK2 874 aa7.49□□□□□ -1.21
VIM-202ENST00000421459 ARSKQ6UWY0 536 aa7.49□□□□□ -1.21
VIM-202ENST00000421459 B3GNT6Q6ZMB0 384 aa7.49□□□□□ -1.21
VIM-202ENST00000421459 ZNF793Q6ZN11 406 aa7.49□□□□□ -1.21
VIM-202ENST00000421459 FAM47EQ6ZV65 393 aa7.49□□□□□ -1.21
VIM-202ENST00000421459 SEM1Q6ZVN7 128 aa7.49□□□□□ -1.21
VIM-202ENST00000421459 WDR53Q7Z5U6 358 aaPredicted RBP7.49□□□□□ -1.21
VIM-202ENST00000421459 SLC22A16Q86VW1 577 aa7.49□□□□□ -1.21
VIM-202ENST00000421459 TGIF2LYQ8IUE0 185 aa7.49□□□□□ -1.21
VIM-202ENST00000421459 ZNF595Q8IYB9 648 aa7.49□□□□□ -1.21
VIM-202ENST00000421459 RNF175Q8N4F7 328 aa7.49□□□□□ -1.21
VIM-202ENST00000421459 SLC2A12Q8TD20 617 aa7.49□□□□□ -1.21
VIM-202ENST00000421459 RHBDF1Q96CC6 855 aa7.49□□□□□ -1.21
VIM-202ENST00000421459 PDLIM5Q96HC4 596 aaKnown RBP7.49□□□□□ -1.21
VIM-202ENST00000421459 PBKQ96KB5 322 aa7.49□□□□□ -1.21
VIM-202ENST00000421459 RUNDC3BQ96NL0 473 aa7.49□□□□□ -1.21
VIM-202ENST00000421459 FAM173AQ9BQD7 235 aa7.49□□□□□ -1.21
VIM-202ENST00000421459 TMEM79Q9BSE2 394 aa7.49□□□□□ -1.21
VIM-202ENST00000421459 SORBS1Q9BX66 1292 aaKnown RBP7.49□□□□□ -1.21
VIM-202ENST00000421459 POLDIP3Q9BY77 421 aaKnown RBP7.49□□□□□ -1.21
VIM-202ENST00000421459 REXO4Q9GZR2 422 aaKnown RBP7.49□□□□□ -1.21
VIM-202ENST00000421459 DDX47Q9H0S4 455 aaKnown RBP7.49□□□□□ -1.21
VIM-202ENST00000421459 LDAHQ9H6V9 325 aa7.49□□□□□ -1.21
VIM-202ENST00000421459 CAB39LQ9H9S4 337 aa7.49□□□□□ -1.21
VIM-202ENST00000421459 IL1RL2Q9HB29 575 aa7.49□□□□□ -1.21
VIM-202ENST00000421459 ADAP2Q9NPF8 381 aa7.49□□□□□ -1.21
VIM-202ENST00000421459 PRDM7Q9NQW5 492 aa7.49□□□□□ -1.21
VIM-202ENST00000421459 CRIM1Q9NZV1 1036 aa7.49□□□□□ -1.21
VIM-202ENST00000421459 ASIC3Q9UHC3 531 aa7.49□□□□□ -1.21
VIM-202ENST00000421459 DAPP1Q9UN19 280 aa7.49□□□□□ -1.21
VIM-202ENST00000421459 PLEKHA6Q9Y2H5 1048 aa7.49□□□□□ -1.21
VIM-202ENST00000421459 OARD1Q9Y530 152 aa7.49□□□□□ -1.21
VIM-202ENST00000421459 HRNRQ86YZ3 2850 aaPredicted RBP7.48□□□□□ -1.21
VIM-202ENST00000421459 A0A1B0GVC2 190 aa7.48□□□□□ -1.21
VIM-202ENST00000421459 FAM95CA0A1B0GW59 222 aa7.48□□□□□ -1.21
VIM-202ENST00000421459 ANKDD1BA6NHY2 528 aa7.48□□□□□ -1.21
VIM-202ENST00000421459 ACOT7O00154 380 aa7.48□□□□□ -1.21
VIM-202ENST00000421459 PGRMC1O00264 195 aaKnown RBP7.48□□□□□ -1.21
VIM-202ENST00000421459 BCKDKO14874 412 aa7.48□□□□□ -1.21
VIM-202ENST00000421459 CLGNO14967 610 aa7.48□□□□□ -1.21
VIM-202ENST00000421459 PROM1O43490 865 aa7.48□□□□□ -1.21
VIM-202ENST00000421459 PRKRAO75569 313 aaKnown RBP7.48□□□□□ -1.21
VIM-202ENST00000421459 CLEC3AO75596 197 aa7.48□□□□□ -1.21
VIM-202ENST00000421459 GNAZP19086 355 aa7.48□□□□□ -1.21
VIM-202ENST00000421459 EPORP19235 508 aa7.48□□□□□ -1.21
VIM-202ENST00000421459 HSPA7P48741 367 aa7.48□□□□□ -1.21
VIM-202ENST00000421459 MAN2A2P49641 1150 aa7.48□□□□□ -1.21
VIM-202ENST00000421459 MTTPP55157 894 aa7.48□□□□□ -1.21
VIM-202ENST00000421459 STX4Q12846 297 aa7.48□□□□□ -1.21
VIM-202ENST00000421459 FOXD4Q12950 439 aaPredicted RBP7.48□□□□□ -1.21
VIM-202ENST00000421459 DOC2AQ14183 400 aa7.48□□□□□ -1.21
VIM-202ENST00000421459 ADPRMQ3LIE5 342 aa7.48□□□□□ -1.21
VIM-202ENST00000421459 C1orf185Q5T7R7 199 aa7.48□□□□□ -1.21
VIM-202ENST00000421459 TMEM64Q6YI46 380 aa7.48□□□□□ -1.21
VIM-202ENST00000421459 RTL4Q6ZR62 310 aa7.48□□□□□ -1.21
VIM-202ENST00000421459 CAPN12Q6ZSI9 719 aa7.48□□□□□ -1.21
VIM-202ENST00000421459 Q71RC1 249 aaPredicted RBP7.48□□□□□ -1.21
VIM-202ENST00000421459 GALNT7Q86SF2 657 aa7.48□□□□□ -1.21
VIM-202ENST00000421459 ZC3HC1Q86WB0 502 aaKnown RBP7.48□□□□□ -1.21
VIM-202ENST00000421459 LRRC8AQ8IWT6 810 aa7.48□□□□□ -1.21
VIM-202ENST00000421459 CLYBLQ8N0X4 340 aa7.48□□□□□ -1.21
VIM-202ENST00000421459 SLC35F6Q8N357 371 aa7.48□□□□□ -1.21
VIM-202ENST00000421459 TMEM132CQ8N3T6 1108 aa7.48□□□□□ -1.21
VIM-202ENST00000421459 SNX31Q8N9S9 440 aa7.48□□□□□ -1.21
VIM-202ENST00000421459 MORN4Q8NDC4 146 aa7.48□□□□□ -1.21
VIM-202ENST00000421459 OR2L5Q8NG80 312 aa7.48□□□□□ -1.21
VIM-202ENST00000421459 ZNF721Q8TF20 911 aa7.48□□□□□ -1.21
VIM-202ENST00000421459 UCN3Q969E3 161 aa7.48□□□□□ -1.21
VIM-202ENST00000421459 KIAA1191Q96A73 305 aa7.48□□□□□ -1.21
VIM-202ENST00000421459 ANKRD9Q96BM1 317 aaPredicted RBP7.48□□□□□ -1.21
VIM-202ENST00000421459 SERINC2Q96SA4 455 aa7.48□□□□□ -1.21
VIM-202ENST00000421459 OSBPL9Q96SU4 736 aa7.48□□□□□ -1.21
VIM-202ENST00000421459 SMR3AQ99954 134 aa7.48□□□□□ -1.21
VIM-202ENST00000421459 FOXC2Q99958 501 aa7.48□□□□□ -1.21
VIM-202ENST00000421459 NPLQ9BXD5 320 aaPredicted RBP7.48□□□□□ -1.21
VIM-202ENST00000421459 CXXC4Q9H2H0 198 aa7.48□□□□□ -1.21
VIM-202ENST00000421459 SLC6A15Q9H2J7 730 aa7.48□□□□□ -1.21
VIM-202ENST00000421459 EXO5Q9H790 373 aa7.48□□□□□ -1.21
VIM-202ENST00000421459 PROK2Q9HC23 129 aa7.48□□□□□ -1.21
VIM-202ENST00000421459 SMYD2Q9NRG4 433 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms