RNA–Protein interactions for RNA: ENST00000417285.6

VEGFA-208, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,081 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-208ENST00000417285 ACSS3Q9H6R3 686 aa23.61■■□□□ 1.37
VEGFA-208ENST00000417285 SNX15Q9NRS6 342 aa23.61■■□□□ 1.37
VEGFA-208ENST00000417285 KCMF1Q9P0J7 381 aa23.61■■□□□ 1.37
VEGFA-208ENST00000417285 ADGRE2Q9UHX3 823 aa23.61■■□□□ 1.37
VEGFA-208ENST00000417285 SH3BGRL2Q9UJC5 107 aa23.61■■□□□ 1.37
VEGFA-208ENST00000417285 SPACA6W5XKT8 324 aa23.61■■□□□ 1.37
VEGFA-208ENST00000417285 ITGA10O75578 1167 aa23.6■■□□□ 1.37
VEGFA-208ENST00000417285 IFNA16P05015 189 aa23.6■■□□□ 1.37
VEGFA-208ENST00000417285 CERS1P27544 350 aa23.6■■□□□ 1.37
VEGFA-208ENST00000417285 MSH2P43246 934 aa23.6■■□□□ 1.37
VEGFA-208ENST00000417285 SERPINB8P50452 374 aa23.6■■□□□ 1.37
VEGFA-208ENST00000417285 HNRNPFP52597 415 aaKnown RBP23.6■■□□□ 1.37
VEGFA-208ENST00000417285 IRF9Q00978 393 aa23.6■■□□□ 1.37
VEGFA-208ENST00000417285 ADNP2Q6IQ32 1131 aa23.6■■□□□ 1.37
VEGFA-208ENST00000417285 MED27Q6P2C8 311 aa23.6■■□□□ 1.37
VEGFA-208ENST00000417285 KLC3Q6P597 504 aa23.6■■□□□ 1.37
VEGFA-208ENST00000417285 BNC2Q6ZN30 1099 aaPredicted RBP23.6■■□□□ 1.37
VEGFA-208ENST00000417285 MORN4Q8NDC4 146 aa23.6■■□□□ 1.37
VEGFA-208ENST00000417285 TMEM52Q8NDY8 209 aa23.6■■□□□ 1.37
VEGFA-208ENST00000417285 ZNF473Q8WTR7 871 aaKnown RBP23.6■■□□□ 1.37
VEGFA-208ENST00000417285 ALOXE3Q9BYJ1 711 aa23.6■■□□□ 1.37
VEGFA-208ENST00000417285 VTI1BQ9UEU0 232 aa23.6■■□□□ 1.37
VEGFA-208ENST00000417285 A0A096LPK6 155 aa23.59■■□□□ 1.37
VEGFA-208ENST00000417285 ARHGAP10A1A4S6 786 aa23.59■■□□□ 1.37
VEGFA-208ENST00000417285 HMX2A2RU54 273 aa23.59■■□□□ 1.37
VEGFA-208ENST00000417285 TGFBR3LH3BV60 316 aa23.59■■□□□ 1.37
VEGFA-208ENST00000417285 TUBB4AP04350 444 aa23.59■■□□□ 1.37
VEGFA-208ENST00000417285 EPB42P16452 691 aa23.59■■□□□ 1.37
VEGFA-208ENST00000417285 TYK2P29597 1187 aa23.59■■□□□ 1.37
VEGFA-208ENST00000417285 SSR4P51571 173 aa23.59■■□□□ 1.37
VEGFA-208ENST00000417285 STX4Q12846 297 aa23.59■■□□□ 1.37
VEGFA-208ENST00000417285 SERTAD2Q14140 314 aa23.59■■□□□ 1.37
VEGFA-208ENST00000417285 ACAP2Q15057 778 aa23.59■■□□□ 1.37
VEGFA-208ENST00000417285 AP5B1Q2VPB7 878 aa23.59■■□□□ 1.37
VEGFA-208ENST00000417285 UBE3DQ7Z6J8 389 aa23.59■■□□□ 1.37
VEGFA-208ENST00000417285 GPALPP1Q8IXQ4 340 aa23.59■■□□□ 1.37
VEGFA-208ENST00000417285 LAS2Q8IYD9 372 aa23.59■■□□□ 1.37
VEGFA-208ENST00000417285 CYP4Z2PQ8N1L4 340 aa23.59■■□□□ 1.37
VEGFA-208ENST00000417285 CPSF7Q8N684 471 aaKnown RBP23.59■■□□□ 1.37
VEGFA-208ENST00000417285 MS4A8Q9BY19 250 aa23.59■■□□□ 1.37
VEGFA-208ENST00000417285 TIMMDC1Q9NPL8 285 aa23.59■■□□□ 1.37
VEGFA-208ENST00000417285 DMGDHQ9UI17 866 aaKnown RBP23.59■■□□□ 1.37
VEGFA-208ENST00000417285 TINAGQ9UJW2 476 aa23.59■■□□□ 1.37
VEGFA-208ENST00000417285 ANGPTL3Q9Y5C1 460 aa23.59■■□□□ 1.37
VEGFA-208ENST00000417285 PCNX1Q96RV3 2341 aa23.58■■□□□ 1.37
VEGFA-208ENST00000417285 KLHL2O95198 593 aa23.58■■□□□ 1.37
VEGFA-208ENST00000417285 CTAGE8P0CG41 777 aa23.58■■□□□ 1.37
VEGFA-208ENST00000417285 PCNAP12004 261 aa23.58■■□□□ 1.37
VEGFA-208ENST00000417285 MTHFD2P13995 350 aa23.58■■□□□ 1.37
VEGFA-208ENST00000417285 GFAPP14136 432 aa23.58■■□□□ 1.37
VEGFA-208ENST00000417285 ABOP16442 354 aa23.58■■□□□ 1.37
VEGFA-208ENST00000417285 ATP5A1P25705 553 aaKnown RBP23.58■■□□□ 1.37
VEGFA-208ENST00000417285 PPP2R1BP30154 601 aa23.58■■□□□ 1.37
VEGFA-208ENST00000417285 ZNF630Q2M218 657 aaPredicted RBP23.58■■□□□ 1.37
VEGFA-208ENST00000417285 GLE1Q53GS7 698 aaKnown RBP23.58■■□□□ 1.37
VEGFA-208ENST00000417285 RNFT1Q5M7Z0 435 aa23.58■■□□□ 1.37
VEGFA-208ENST00000417285 CLNKQ7Z7G1 428 aa23.58■■□□□ 1.37
VEGFA-208ENST00000417285 SULF2Q8IWU5 870 aa23.58■■□□□ 1.37
VEGFA-208ENST00000417285 CTAGE4Q8IX94 777 aa23.58■■□□□ 1.37
VEGFA-208ENST00000417285 EID3Q8N140 333 aa23.58■■□□□ 1.37
VEGFA-208ENST00000417285 ACOT4Q8N9L9 421 aa23.58■■□□□ 1.37
VEGFA-208ENST00000417285 NOA1Q8NC60 698 aaKnown RBP23.58■■□□□ 1.37
VEGFA-208ENST00000417285 OR14A16Q8NHC5 309 aa23.58■■□□□ 1.37
VEGFA-208ENST00000417285 IFT81Q8WYA0 676 aa23.58■■□□□ 1.37
VEGFA-208ENST00000417285 CMTM7Q96FZ5 175 aa23.58■■□□□ 1.37
VEGFA-208ENST00000417285 FMO2Q99518 471 aa23.58■■□□□ 1.37
VEGFA-208ENST00000417285 FUT8Q9BYC5 575 aa23.58■■□□□ 1.37
VEGFA-208ENST00000417285 CDC42EP4Q9H3Q1 356 aaKnown RBP23.58■■□□□ 1.37
VEGFA-208ENST00000417285 ZNF223Q9UK11 482 aaPredicted RBP23.58■■□□□ 1.37
VEGFA-208ENST00000417285 MEMO1Q9Y316 297 aa23.58■■□□□ 1.37
VEGFA-208ENST00000417285 PEX1O43933 1283 aa23.57■■□□□ 1.36
VEGFA-208ENST00000417285 HTR1EP28566 365 aa23.57■■□□□ 1.36
VEGFA-208ENST00000417285 BIKQ13323 160 aa23.57■■□□□ 1.36
VEGFA-208ENST00000417285 NAA30Q147X3 362 aaPredicted RBP23.57■■□□□ 1.36
VEGFA-208ENST00000417285 GRHL2Q6ISB3 625 aa23.57■■□□□ 1.36
VEGFA-208ENST00000417285 HSDL2Q6YN16 418 aa23.57■■□□□ 1.36
VEGFA-208ENST00000417285 TEX9Q8N6V9 391 aa23.57■■□□□ 1.36
VEGFA-208ENST00000417285 OR7G3Q8NG95 312 aa23.57■■□□□ 1.36
VEGFA-208ENST00000417285 PTPMT1Q8WUK0 201 aaPredicted RBP23.57■■□□□ 1.36
VEGFA-208ENST00000417285 CSF3RQ99062 836 aa23.57■■□□□ 1.36
VEGFA-208ENST00000417285 ERVK-11Q9UQG0 969 aa23.57■■□□□ 1.36
VEGFA-208ENST00000417285 ENO4A6NNW6 628 aa23.56■■□□□ 1.36
VEGFA-208ENST00000417285 KIF2AO00139 706 aaPredicted RBP23.56■■□□□ 1.36
VEGFA-208ENST00000417285 PRRG2O14669 202 aa23.56■■□□□ 1.36
VEGFA-208ENST00000417285 ACSL3O95573 720 aa23.56■■□□□ 1.36
VEGFA-208ENST00000417285 ALDOAP04075 364 aaKnown RBP23.56■■□□□ 1.36
VEGFA-208ENST00000417285 INHBAP08476 426 aa23.56■■□□□ 1.36
VEGFA-208ENST00000417285 TNNI3P19429 210 aa23.56■■□□□ 1.36
VEGFA-208ENST00000417285 HIST1H1TP22492 207 aaPredicted RBP23.56■■□□□ 1.36
VEGFA-208ENST00000417285 MEOX1P50221 254 aa23.56■■□□□ 1.36
VEGFA-208ENST00000417285 ALDH18A1P54886 795 aaKnown RBP23.56■■□□□ 1.36
VEGFA-208ENST00000417285 SETDB1Q15047 1291 aa23.56■■□□□ 1.36
VEGFA-208ENST00000417285 PFKFB4Q16877 469 aa23.56■■□□□ 1.36
VEGFA-208ENST00000417285 DEPDC1Q5TB30 811 aa23.56■■□□□ 1.36
VEGFA-208ENST00000417285 TAOK1Q7L7X3 1001 aa23.56■■□□□ 1.36
VEGFA-208ENST00000417285 ZFP62Q8NB50 900 aaPredicted RBP23.56■■□□□ 1.36
VEGFA-208ENST00000417285 OR8K3Q8NH51 312 aa23.56■■□□□ 1.36
VEGFA-208ENST00000417285 C16orf52Q8NHV5 167 aa23.56■■□□□ 1.36
VEGFA-208ENST00000417285 MAPKAP1Q9BPZ7 522 aa23.56■■□□□ 1.36
VEGFA-208ENST00000417285 MS4A12Q9NXJ0 267 aa23.56■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms