RNA–Protein interactions for RNA: ENST00000416778.5

CPNE1-210, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 744 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-210ENST00000416778 ADAP2Q9NPF8 381 aa16.65■□□□□ 0.26
CPNE1-210ENST00000416778 ADGRE2Q9UHX3 823 aa16.65■□□□□ 0.26
CPNE1-210ENST00000416778 NPIPA1Q9UND3 350 aa16.65■□□□□ 0.26
CPNE1-210ENST00000416778 TSC22D4Q9Y3Q8 395 aa16.65■□□□□ 0.26
CPNE1-210ENST00000416778 CROCCQ5TZA2 2017 aa16.65■□□□□ 0.26
CPNE1-210ENST00000416778 LRRC14BA6NHZ5 514 aa16.64■□□□□ 0.25
CPNE1-210ENST00000416778 SLC19A2O60779 497 aa16.64■□□□□ 0.25
CPNE1-210ENST00000416778 ITGA10O75578 1167 aa16.64■□□□□ 0.25
CPNE1-210ENST00000416778 HIST1H1TP22492 207 aaPredicted RBP16.64■□□□□ 0.25
CPNE1-210ENST00000416778 SERPINB1P30740 379 aa16.64■□□□□ 0.25
CPNE1-210ENST00000416778 PHBP35232 272 aa16.64■□□□□ 0.25
CPNE1-210ENST00000416778 PIK3CBP42338 1070 aa16.64■□□□□ 0.25
CPNE1-210ENST00000416778 ALDH18A1P54886 795 aaKnown RBP16.64■□□□□ 0.25
CPNE1-210ENST00000416778 PCBP2Q15366 365 aaKnown RBP eCLIP16.64■□□□□ 0.252e-7■■□□□ 12.7
CPNE1-210ENST00000416778 KHDRBS2Q5VWX1 349 aaKnown RBP16.64■□□□□ 0.25
CPNE1-210ENST00000416778 LIPJQ5W064 366 aa16.64■□□□□ 0.25
CPNE1-210ENST00000416778 OR4C11Q6IEV9 310 aa16.64■□□□□ 0.25
CPNE1-210ENST00000416778 C16orf47Q6ZP98 133 aaPredicted RBP16.64■□□□□ 0.25
CPNE1-210ENST00000416778 Q6ZPB1 254 aaPredicted RBP16.64■□□□□ 0.25
CPNE1-210ENST00000416778 SPPL2CQ8IUH8 684 aa16.64■□□□□ 0.25
CPNE1-210ENST00000416778 SULF2Q8IWU5 870 aa16.64■□□□□ 0.25
CPNE1-210ENST00000416778 CHERPQ8IWX8 916 aaKnown RBP16.64■□□□□ 0.25
CPNE1-210ENST00000416778 PLD6Q8N2A8 252 aaKnown RBP16.64■□□□□ 0.25
CPNE1-210ENST00000416778 NOA1Q8NC60 698 aaKnown RBP16.64■□□□□ 0.25
CPNE1-210ENST00000416778 MORN4Q8NDC4 146 aa16.64■□□□□ 0.25
CPNE1-210ENST00000416778 HUS1BQ8NHY5 278 aa16.64■□□□□ 0.25
CPNE1-210ENST00000416778 ITLN2Q8WWU7 325 aaPredicted RBP16.64■□□□□ 0.25
CPNE1-210ENST00000416778 TSPAN10Q9H1Z9 355 aaPredicted RBP16.64■□□□□ 0.25
CPNE1-210ENST00000416778 LIN28AQ9H9Z2 209 aaKnown RBP16.64■□□□□ 0.25
CPNE1-210ENST00000416778 YARS2Q9Y2Z4 477 aaKnown RBP16.64■□□□□ 0.25
CPNE1-210ENST00000416778 CLCA3PQ9Y6N3 262 aa16.64■□□□□ 0.25
CPNE1-210ENST00000416778 SYNDIG1LA6NDD5 238 aa16.63■□□□□ 0.25
CPNE1-210ENST00000416778 SAP18O00422 153 aaKnown RBP16.63■□□□□ 0.25
CPNE1-210ENST00000416778 LDB3O75112 727 aa16.63■□□□□ 0.25
CPNE1-210ENST00000416778 MLYCDO95822 493 aa16.63■□□□□ 0.25
CPNE1-210ENST00000416778 IFNA16P05015 189 aa16.63■□□□□ 0.25
CPNE1-210ENST00000416778 STX4Q12846 297 aa16.63■□□□□ 0.25
CPNE1-210ENST00000416778 SLAMF1Q13291 335 aa16.63■□□□□ 0.25
CPNE1-210ENST00000416778 UAP1Q16222 522 aaPredicted RBP16.63■□□□□ 0.25
CPNE1-210ENST00000416778 C3AR1Q16581 482 aa16.63■□□□□ 0.25
CPNE1-210ENST00000416778 CEP128Q6ZU80 1094 aa16.63■□□□□ 0.25
CPNE1-210ENST00000416778 MDGA2Q7Z553 956 aa16.63■□□□□ 0.25
CPNE1-210ENST00000416778 SLC34A3Q8N130 599 aa16.63■□□□□ 0.25
CPNE1-210ENST00000416778 CPSF7Q8N684 471 aaKnown RBP16.63■□□□□ 0.25
CPNE1-210ENST00000416778 FAM98AQ8NCA5 519 aaKnown RBP16.63■□□□□ 0.25
CPNE1-210ENST00000416778 SLC44A1Q8WWI5 657 aa16.63■□□□□ 0.25
CPNE1-210ENST00000416778 IFT81Q8WYA0 676 aa16.63■□□□□ 0.25
CPNE1-210ENST00000416778 DAZLQ92904 295 aaKnown RBP16.63■□□□□ 0.25
CPNE1-210ENST00000416778 TMEM125Q96AQ2 219 aa16.63■□□□□ 0.25
CPNE1-210ENST00000416778 RGMAQ96B86 450 aa16.63■□□□□ 0.25
CPNE1-210ENST00000416778 CCDC120Q96HB5 630 aa16.63■□□□□ 0.25
CPNE1-210ENST00000416778 CCDC77Q9BR77 488 aa16.63■□□□□ 0.25
CPNE1-210ENST00000416778 SORBS1Q9BX66 1292 aaKnown RBP16.63■□□□□ 0.25
CPNE1-210ENST00000416778 TSPYL1Q9H0U9 437 aa16.63■□□□□ 0.25
CPNE1-210ENST00000416778 ZNF358Q9NW07 568 aa16.63■□□□□ 0.25
CPNE1-210ENST00000416778 PSD3Q9NYI0 1048 aa16.63■□□□□ 0.25
CPNE1-210ENST00000416778 PCDHGA11Q9Y5H2 935 aa16.63■□□□□ 0.25
CPNE1-210ENST00000416778 H0YIV9 168 aa16.62■□□□□ 0.25
CPNE1-210ENST00000416778 KLRC4-KLRK1H3BQV0 150 aa16.62■□□□□ 0.25
CPNE1-210ENST00000416778 PEX1O43933 1283 aa16.62■□□□□ 0.25
CPNE1-210ENST00000416778 GFAPP14136 432 aa16.62■□□□□ 0.25
CPNE1-210ENST00000416778 PTX3P26022 381 aaPredicted RBP16.62■□□□□ 0.25
CPNE1-210ENST00000416778 ART3Q13508 389 aa16.62■□□□□ 0.25
CPNE1-210ENST00000416778 SERTAD2Q14140 314 aa16.62■□□□□ 0.25
CPNE1-210ENST00000416778 METTL2BQ6P1Q9 378 aaKnown RBP16.62■□□□□ 0.25
CPNE1-210ENST00000416778 TMEM156Q8N614 296 aa16.62■□□□□ 0.25
CPNE1-210ENST00000416778 ZNF321PQ8N8H1 164 aa16.62■□□□□ 0.25
CPNE1-210ENST00000416778 ISL2Q96A47 359 aa16.62■□□□□ 0.25
CPNE1-210ENST00000416778 MTERF1Q99551 399 aaKnown RBP16.62■□□□□ 0.25
CPNE1-210ENST00000416778 VPS11Q9H270 941 aa16.62■□□□□ 0.25
CPNE1-210ENST00000416778 CDC42EP4Q9H3Q1 356 aaKnown RBP16.62■□□□□ 0.25
CPNE1-210ENST00000416778 IPPKQ9H8X2 491 aa16.62■□□□□ 0.25
CPNE1-210ENST00000416778 MYOTQ9UBF9 498 aa16.62■□□□□ 0.25
CPNE1-210ENST00000416778 MTRF1LQ9UGC7 380 aaKnown RBP16.62■□□□□ 0.25
CPNE1-210ENST00000416778 ANGPTL3Q9Y5C1 460 aa16.62■□□□□ 0.25
CPNE1-210ENST00000416778 TNPO3Q9Y5L0 923 aaKnown RBP16.62■□□□□ 0.25
CPNE1-210ENST00000416778 ZNHIT1O43257 154 aa16.61■□□□□ 0.25
CPNE1-210ENST00000416778 UGDHO60701 494 aa16.61■□□□□ 0.25
CPNE1-210ENST00000416778 OR2J2O76002 312 aa16.61■□□□□ 0.25
CPNE1-210ENST00000416778 SIX3O95343 332 aaPredicted RBP16.61■□□□□ 0.25
CPNE1-210ENST00000416778 ETHE1O95571 254 aa16.61■□□□□ 0.25
CPNE1-210ENST00000416778 TNNI3P19429 210 aa16.61■□□□□ 0.25
CPNE1-210ENST00000416778 CPN2P22792 545 aa16.61■□□□□ 0.25
CPNE1-210ENST00000416778 ECHS1P30084 290 aa16.61■□□□□ 0.25
CPNE1-210ENST00000416778 MAGEA12P43365 314 aa16.61■□□□□ 0.25
CPNE1-210ENST00000416778 SERPINB8P50452 374 aa16.61■□□□□ 0.25
CPNE1-210ENST00000416778 SSR4P51571 173 aa16.61■□□□□ 0.25
CPNE1-210ENST00000416778 ARFIP1P53367 373 aa16.61■□□□□ 0.25
CPNE1-210ENST00000416778 IGLV3-21P80748 117 aaPredicted RBP16.61■□□□□ 0.25
CPNE1-210ENST00000416778 ID2Q02363 134 aa16.61■□□□□ 0.25
CPNE1-210ENST00000416778 GTF2H2Q13888 395 aa16.61■□□□□ 0.25
CPNE1-210ENST00000416778 GLE1Q53GS7 698 aaKnown RBP16.61■□□□□ 0.25
CPNE1-210ENST00000416778 GTF2H2CQ6P1K8 395 aa16.61■□□□□ 0.25
CPNE1-210ENST00000416778 MTFR2Q6P444 385 aa16.61■□□□□ 0.25
CPNE1-210ENST00000416778 KLC3Q6P597 504 aa16.61■□□□□ 0.25
CPNE1-210ENST00000416778 HSDL2Q6YN16 418 aa16.61■□□□□ 0.25
CPNE1-210ENST00000416778 GOLGA7Q7Z5G4 137 aa16.61■□□□□ 0.25
CPNE1-210ENST00000416778 FGD2Q7Z6J4 655 aa16.61■□□□□ 0.25
CPNE1-210ENST00000416778 MRGPRGQ86SM5 289 aa16.61■□□□□ 0.25
CPNE1-210ENST00000416778 OR4N5Q8IXE1 308 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms