RNA–Protein interactions for RNA: ENST00000415886.2

CTHRC1-202, Transcript of collagen triple helix repeat containing 1, humanhuman

TSL 2 BASIC

Gene CTHRC1, Length 571 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-202ENST00000415886 LILRB4Q8NHJ6 448 aa12.35□□□□□ -0.43
CTHRC1-202ENST00000415886 UTP15Q8TED0 518 aaKnown RBP12.35□□□□□ -0.43
CTHRC1-202ENST00000415886 UBE2E3Q969T4 207 aa12.35□□□□□ -0.43
CTHRC1-202ENST00000415886 TBC1D20Q96BZ9 403 aa12.35□□□□□ -0.43
CTHRC1-202ENST00000415886 NXNL1Q96CM4 212 aa12.35□□□□□ -0.43
CTHRC1-202ENST00000415886 SEC16BQ96JE7 1060 aa12.35□□□□□ -0.43
CTHRC1-202ENST00000415886 OR1F2PQ96R84 312 aa12.35□□□□□ -0.43
CTHRC1-202ENST00000415886 VPS11Q9H270 941 aa12.35□□□□□ -0.43
CTHRC1-202ENST00000415886 SPNS1Q9H2V7 528 aa12.35□□□□□ -0.43
CTHRC1-202ENST00000415886 NINJ2Q9NZG7 142 aa12.35□□□□□ -0.43
CTHRC1-202ENST00000415886 NUDT4Q9NZJ9 180 aa12.35□□□□□ -0.43
CTHRC1-202ENST00000415886 SCN3AQ9NY46 2000 aa12.35□□□□□ -0.43
CTHRC1-202ENST00000415886 A0A096LPK6 155 aa12.34□□□□□ -0.43
CTHRC1-202ENST00000415886 POC1B-GALNT4F8VUJ3 575 aa12.34□□□□□ -0.43
CTHRC1-202ENST00000415886 PRMT3O60678 531 aa12.34□□□□□ -0.43
CTHRC1-202ENST00000415886 WISP3O95389 354 aaPredicted RBP12.34□□□□□ -0.43
CTHRC1-202ENST00000415886 C1QAP02745 245 aa12.34□□□□□ -0.43
CTHRC1-202ENST00000415886 C2P06681 752 aa12.34□□□□□ -0.43
CTHRC1-202ENST00000415886 FHP07954 510 aa12.34□□□□□ -0.43
CTHRC1-202ENST00000415886 SLC35E2BP0CK96 405 aa12.34□□□□□ -0.43
CTHRC1-202ENST00000415886 GFAPP14136 432 aa12.34□□□□□ -0.43
CTHRC1-202ENST00000415886 SERPINB8P50452 374 aa12.34□□□□□ -0.43
CTHRC1-202ENST00000415886 MLF1P58340 268 aa12.34□□□□□ -0.43
CTHRC1-202ENST00000415886 OLR1P78380 273 aa12.34□□□□□ -0.43
CTHRC1-202ENST00000415886 BMPR2Q13873 1038 aa12.34□□□□□ -0.43
CTHRC1-202ENST00000415886 ACAP2Q15057 778 aa12.34□□□□□ -0.43
CTHRC1-202ENST00000415886 CMPK2Q5EBM0 449 aa12.34□□□□□ -0.43
CTHRC1-202ENST00000415886 TMEM211Q6ICI0 200 aa12.34□□□□□ -0.43
CTHRC1-202ENST00000415886 LRRC70Q7Z2Q7 622 aa12.34□□□□□ -0.43
CTHRC1-202ENST00000415886 RELL1Q8IUW5 271 aa12.34□□□□□ -0.43
CTHRC1-202ENST00000415886 CCDC71Q8IV32 467 aaPredicted RBP12.34□□□□□ -0.43
CTHRC1-202ENST00000415886 SULF2Q8IWU5 870 aa12.34□□□□□ -0.43
CTHRC1-202ENST00000415886 KLHDC8AQ8IYD2 350 aa12.34□□□□□ -0.43
CTHRC1-202ENST00000415886 CYP4X1Q8N118 509 aa12.34□□□□□ -0.43
CTHRC1-202ENST00000415886 AFAP1L2Q8N4X5 818 aa12.34□□□□□ -0.43
CTHRC1-202ENST00000415886 KCTD4Q8WVF5 259 aa12.34□□□□□ -0.43
CTHRC1-202ENST00000415886 TMEM125Q96AQ2 219 aa12.34□□□□□ -0.43
CTHRC1-202ENST00000415886 PTCD3Q96EY7 689 aaKnown RBP12.34□□□□□ -0.43
CTHRC1-202ENST00000415886 PTCHD1Q96NR3 888 aa12.34□□□□□ -0.43
CTHRC1-202ENST00000415886 EFCAB11Q9BUY7 163 aa12.34□□□□□ -0.43
CTHRC1-202ENST00000415886 SLC6A16Q9GZN6 736 aa12.34□□□□□ -0.43
CTHRC1-202ENST00000415886 EHD1Q9H4M9 534 aa12.34□□□□□ -0.43
CTHRC1-202ENST00000415886 ACSS3Q9H6R3 686 aa12.34□□□□□ -0.43
CTHRC1-202ENST00000415886 NT5DC2Q9H857 520 aa12.34□□□□□ -0.43
CTHRC1-202ENST00000415886 TRIM45Q9H8W5 580 aaPredicted RBP12.34□□□□□ -0.43
CTHRC1-202ENST00000415886 KCNJ16Q9NPI9 418 aa12.34□□□□□ -0.43
CTHRC1-202ENST00000415886 SNX15Q9NRS6 342 aa12.34□□□□□ -0.43
CTHRC1-202ENST00000415886 OPTCQ9UBM4 332 aa12.34□□□□□ -0.43
CTHRC1-202ENST00000415886 PTBP2Q9UKA9 531 aaKnown RBP12.34□□□□□ -0.43
CTHRC1-202ENST00000415886 A0A087WUV0 522 aaPredicted RBP12.33□□□□□ -0.44
CTHRC1-202ENST00000415886 CCDC189A1A4V9 331 aa12.33□□□□□ -0.44
CTHRC1-202ENST00000415886 KERAO60938 352 aa12.33□□□□□ -0.44
CTHRC1-202ENST00000415886 DNAJB6O75190 326 aa12.33□□□□□ -0.44
CTHRC1-202ENST00000415886 CLEC3AO75596 197 aa12.33□□□□□ -0.44
CTHRC1-202ENST00000415886 PDE9AO76083 593 aa12.33□□□□□ -0.44
CTHRC1-202ENST00000415886 HOXD4P09016 255 aaPredicted RBP12.33□□□□□ -0.44
CTHRC1-202ENST00000415886 RNH1P13489 461 aaKnown RBP12.33□□□□□ -0.44
CTHRC1-202ENST00000415886 EPB42P16452 691 aa12.33□□□□□ -0.44
CTHRC1-202ENST00000415886 SERPINB9P50453 376 aa12.33□□□□□ -0.44
CTHRC1-202ENST00000415886 HLCSP50747 726 aa12.33□□□□□ -0.44
CTHRC1-202ENST00000415886 NR0B1P51843 470 aaKnown RBP12.33□□□□□ -0.44
CTHRC1-202ENST00000415886 GPR85P60893 370 aa12.33□□□□□ -0.44
CTHRC1-202ENST00000415886 MYBPHQ13203 477 aa12.33□□□□□ -0.44
CTHRC1-202ENST00000415886 CHIT1Q13231 466 aa12.33□□□□□ -0.44
CTHRC1-202ENST00000415886 DOC2AQ14183 400 aa12.33□□□□□ -0.44
CTHRC1-202ENST00000415886 RCN2Q14257 317 aa12.33□□□□□ -0.44
CTHRC1-202ENST00000415886 CES4AQ5XG92 561 aa12.33□□□□□ -0.44
CTHRC1-202ENST00000415886 TGIF2LYQ8IUE0 185 aa12.33□□□□□ -0.44
CTHRC1-202ENST00000415886 POGLUT1Q8NBL1 392 aa12.33□□□□□ -0.44
CTHRC1-202ENST00000415886 PDPRQ8NCN5 879 aa12.33□□□□□ -0.44
CTHRC1-202ENST00000415886 CREB3L4Q8TEY5 395 aa12.33□□□□□ -0.44
CTHRC1-202ENST00000415886 RND1Q92730 232 aa12.33□□□□□ -0.44
CTHRC1-202ENST00000415886 SCYL1Q96KG9 808 aa12.33□□□□□ -0.44
CTHRC1-202ENST00000415886 TMEM79Q9BSE2 394 aa12.33□□□□□ -0.44
CTHRC1-202ENST00000415886 TP63Q9H3D4 680 aaPredicted RBP12.33□□□□□ -0.44
CTHRC1-202ENST00000415886 CDC42EP4Q9H3Q1 356 aaKnown RBP12.33□□□□□ -0.44
CTHRC1-202ENST00000415886 KLHL31Q9H511 634 aa12.33□□□□□ -0.44
CTHRC1-202ENST00000415886 CCM2LQ9NUG4 571 aaPredicted RBP12.33□□□□□ -0.44
CTHRC1-202ENST00000415886 KCNN3Q9UGI6 736 aa12.33□□□□□ -0.44
CTHRC1-202ENST00000415886 KLF13Q9Y2Y9 288 aaPredicted RBP12.33□□□□□ -0.44
CTHRC1-202ENST00000415886 FAM221AA4D161 298 aa12.32□□□□□ -0.44
CTHRC1-202ENST00000415886 K7EPI3 171 aa12.32□□□□□ -0.44
CTHRC1-202ENST00000415886 UBXN8O00124 270 aa12.32□□□□□ -0.44
CTHRC1-202ENST00000415886 CLDN4O14493 209 aa12.32□□□□□ -0.44
CTHRC1-202ENST00000415886 CDK2AP1O14519 115 aa12.32□□□□□ -0.44
CTHRC1-202ENST00000415886 ERI3O43414 337 aaKnown RBP12.32□□□□□ -0.44
CTHRC1-202ENST00000415886 B3GALT2O43825 422 aa12.32□□□□□ -0.44
CTHRC1-202ENST00000415886 PEX1O43933 1283 aa12.32□□□□□ -0.44
CTHRC1-202ENST00000415886 KLHL2O95198 593 aa12.32□□□□□ -0.44
CTHRC1-202ENST00000415886 ZWINTO95229 277 aa12.32□□□□□ -0.44
CTHRC1-202ENST00000415886 B3GALT4O96024 378 aa12.32□□□□□ -0.44
CTHRC1-202ENST00000415886 RBP1P09455 135 aa12.32□□□□□ -0.44
CTHRC1-202ENST00000415886 PCNAP12004 261 aa12.32□□□□□ -0.44
CTHRC1-202ENST00000415886 TRHRP34981 398 aaPredicted RBP12.32□□□□□ -0.44
CTHRC1-202ENST00000415886 KCNC1P48547 511 aa12.32□□□□□ -0.44
CTHRC1-202ENST00000415886 PLA2G16P53816 162 aa12.32□□□□□ -0.44
CTHRC1-202ENST00000415886 NUP107P57740 925 aa12.32□□□□□ -0.44
CTHRC1-202ENST00000415886 PMPCAQ10713 525 aa12.32□□□□□ -0.44
CTHRC1-202ENST00000415886 EMC4Q5J8M3 183 aa12.32□□□□□ -0.44
CTHRC1-202ENST00000415886 MED27Q6P2C8 311 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms