RNA–Protein interactions for RNA: ENST00000415461.2

CTTN-205, Transcript of cortactin, humanhuman

TSL 3

Gene CTTN, Length 1,021 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-205ENST00000415461 PHF21BQ96EK2 531 aa18.78■□□□□ 0.6
CTTN-205ENST00000415461 VMP1Q96GC9 406 aa18.78■□□□□ 0.6
CTTN-205ENST00000415461 IPPKQ9H8X2 491 aa18.78■□□□□ 0.6
CTTN-205ENST00000415461 SEC14L3Q9UDX4 400 aa18.78■□□□□ 0.6
CTTN-205ENST00000415461 NFU1Q9UMS0 254 aa18.78■□□□□ 0.6
CTTN-205ENST00000415461 A0A087WUV0 522 aaPredicted RBP18.77■□□□□ 0.6
CTTN-205ENST00000415461 ASPDHA6ND91 283 aa18.77■□□□□ 0.6
CTTN-205ENST00000415461 TRIM49D1C9J1S8 452 aa18.77■□□□□ 0.6
CTTN-205ENST00000415461 FCHO1O14526 889 aa18.77■□□□□ 0.6
CTTN-205ENST00000415461 PRKNO60260 465 aaPredicted RBP18.77■□□□□ 0.6
CTTN-205ENST00000415461 CTNSO60931 367 aa18.77■□□□□ 0.6
CTTN-205ENST00000415461 LDB3O75112 727 aa18.77■□□□□ 0.6
CTTN-205ENST00000415461 KRT38O76015 456 aa18.77■□□□□ 0.6
CTTN-205ENST00000415461 SP1P08047 785 aa18.77■□□□□ 0.6
CTTN-205ENST00000415461 TRHRP34981 398 aaPredicted RBP18.77■□□□□ 0.6
CTTN-205ENST00000415461 PIK3CBP42338 1070 aa18.77■□□□□ 0.6
CTTN-205ENST00000415461 CYB561P49447 251 aa18.77■□□□□ 0.6
CTTN-205ENST00000415461 GPR143P51810 404 aa18.77■□□□□ 0.6
CTTN-205ENST00000415461 RAP1GDS1P52306 607 aa18.77■□□□□ 0.6
CTTN-205ENST00000415461 RPS13P62277 151 aaKnown RBP18.77■□□□□ 0.6
CTTN-205ENST00000415461 ID2Q02363 134 aa18.77■□□□□ 0.6
CTTN-205ENST00000415461 STX4Q12846 297 aa18.77■□□□□ 0.6
CTTN-205ENST00000415461 ELAVL1Q15717 326 aaKnown RBP18.77■□□□□ 0.6
CTTN-205ENST00000415461 CPSF6Q16630 551 aaKnown RBP eCLIP18.77■□□□□ 0.6
CTTN-205ENST00000415461 DEPDC1Q5TB30 811 aa18.77■□□□□ 0.6
CTTN-205ENST00000415461 FJX1Q86VR8 437 aa18.77■□□□□ 0.6
CTTN-205ENST00000415461 ZNF227Q86WZ6 799 aa18.77■□□□□ 0.6
CTTN-205ENST00000415461 ARMC10Q8N2F6 343 aa18.77■□□□□ 0.6
CTTN-205ENST00000415461 SREK1Q8WXA9 508 aaKnown RBP18.77■□□□□ 0.6
CTTN-205ENST00000415461 SCYL1Q96KG9 808 aa18.77■□□□□ 0.6
CTTN-205ENST00000415461 FRMD6Q96NE9 622 aa18.77■□□□□ 0.6
CTTN-205ENST00000415461 ALOXE3Q9BYJ1 711 aa18.77■□□□□ 0.6
CTTN-205ENST00000415461 TSPAN10Q9H1Z9 355 aaPredicted RBP18.77■□□□□ 0.6
CTTN-205ENST00000415461 ADGRE2Q9UHX3 823 aa18.77■□□□□ 0.6
CTTN-205ENST00000415461 ZNF180Q9UJW8 692 aa18.77■□□□□ 0.6
CTTN-205ENST00000415461 RNF11Q9Y3C5 154 aa18.77■□□□□ 0.6
CTTN-205ENST00000415461 TNPO3Q9Y5L0 923 aaKnown RBP18.77■□□□□ 0.6
CTTN-205ENST00000415461 H0YIV9 168 aa18.76■□□□□ 0.59
CTTN-205ENST00000415461 PLPP1O14494 284 aa18.76■□□□□ 0.59
CTTN-205ENST00000415461 UGDHO60701 494 aa18.76■□□□□ 0.59
CTTN-205ENST00000415461 RBP1P09455 135 aa18.76■□□□□ 0.59
CTTN-205ENST00000415461 CPN2P22792 545 aa18.76■□□□□ 0.59
CTTN-205ENST00000415461 PIK3CGP48736 1102 aa18.76■□□□□ 0.59
CTTN-205ENST00000415461 HLCSP50747 726 aa18.76■□□□□ 0.59
CTTN-205ENST00000415461 MAPKAPK3Q16644 382 aa18.76■□□□□ 0.59
CTTN-205ENST00000415461 OR4C11Q6IEV9 310 aa18.76■□□□□ 0.59
CTTN-205ENST00000415461 SLC25A25Q6KCM7 469 aa18.76■□□□□ 0.59
CTTN-205ENST00000415461 C16orf47Q6ZP98 133 aaPredicted RBP18.76■□□□□ 0.59
CTTN-205ENST00000415461 MAMDC2Q7Z304 686 aaPredicted RBP18.76■□□□□ 0.59
CTTN-205ENST00000415461 PNPLA5Q7Z6Z6 429 aaPredicted RBP18.76■□□□□ 0.59
CTTN-205ENST00000415461 CEP112Q8N8E3 955 aa18.76■□□□□ 0.59
CTTN-205ENST00000415461 CDK15Q96Q40 435 aa18.76■□□□□ 0.59
CTTN-205ENST00000415461 NOL11Q9H8H0 719 aaKnown RBP18.76■□□□□ 0.59
CTTN-205ENST00000415461 TRIM45Q9H8W5 580 aaPredicted RBP18.76■□□□□ 0.59
CTTN-205ENST00000415461 TSC22D4Q9Y3Q8 395 aa18.76■□□□□ 0.59
CTTN-205ENST00000415461 PCDHGA11Q9Y5H2 935 aa18.76■□□□□ 0.59
CTTN-205ENST00000415461 SPACA6W5XKT8 324 aa18.76■□□□□ 0.59
CTTN-205ENST00000415461 EXOC1LA0A1B0GW35 172 aa18.75■□□□□ 0.59
CTTN-205ENST00000415461 OR7A17O14581 309 aa18.75■□□□□ 0.59
CTTN-205ENST00000415461 NME2P1O60361 137 aa18.75■□□□□ 0.59
CTTN-205ENST00000415461 ITGA10O75578 1167 aa18.75■□□□□ 0.59
CTTN-205ENST00000415461 NME2P22392 152 aa18.75■□□□□ 0.59
CTTN-205ENST00000415461 CNTFP26441 200 aa18.75■□□□□ 0.59
CTTN-205ENST00000415461 COL8A1P27658 744 aa18.75■□□□□ 0.59
CTTN-205ENST00000415461 ARL1P40616 181 aaPredicted RBP18.75■□□□□ 0.59
CTTN-205ENST00000415461 PER3P56645 1201 aa18.75■□□□□ 0.59
CTTN-205ENST00000415461 PHEXP78562 749 aa18.75■□□□□ 0.59
CTTN-205ENST00000415461 SLAMF1Q13291 335 aa18.75■□□□□ 0.59
CTTN-205ENST00000415461 TSNAXIP1Q2TAA8 658 aa18.75■□□□□ 0.59
CTTN-205ENST00000415461 TMEM132CQ8N3T6 1108 aa18.75■□□□□ 0.59
CTTN-205ENST00000415461 L3MBTL4Q8NA19 623 aa18.75■□□□□ 0.59
CTTN-205ENST00000415461 OR52B6Q8NGF0 335 aa18.75■□□□□ 0.59
CTTN-205ENST00000415461 OR14A16Q8NHC5 309 aa18.75■□□□□ 0.59
CTTN-205ENST00000415461 PTPMT1Q8WUK0 201 aaPredicted RBP18.75■□□□□ 0.59
CTTN-205ENST00000415461 RGMAQ96B86 450 aa18.75■□□□□ 0.59
CTTN-205ENST00000415461 ANKRD9Q96BM1 317 aaPredicted RBP18.75■□□□□ 0.59
CTTN-205ENST00000415461 REPS1Q96D71 796 aa18.75■□□□□ 0.59
CTTN-205ENST00000415461 NSUN5Q96P11 429 aaKnown RBP18.75■□□□□ 0.59
CTTN-205ENST00000415461 CCDC77Q9BR77 488 aa18.75■□□□□ 0.59
CTTN-205ENST00000415461 CENPKQ9BS16 269 aa18.75■□□□□ 0.59
CTTN-205ENST00000415461 ZNF717Q9BY31 904 aaPredicted RBP18.75■□□□□ 0.59
CTTN-205ENST00000415461 LIN28AQ9H9Z2 209 aaKnown RBP18.75■□□□□ 0.59
CTTN-205ENST00000415461 VTI1BQ9UEU0 232 aa18.75■□□□□ 0.59
CTTN-205ENST00000415461 PCTPQ9UKL6 214 aa18.75■□□□□ 0.59
CTTN-205ENST00000415461 CLCA3PQ9Y6N3 262 aa18.75■□□□□ 0.59
CTTN-205ENST00000415461 SYNDIG1LA6NDD5 238 aa18.74■□□□□ 0.59
CTTN-205ENST00000415461 CDK2AP1O14519 115 aa18.74■□□□□ 0.59
CTTN-205ENST00000415461 FGF17O60258 216 aa18.74■□□□□ 0.59
CTTN-205ENST00000415461 ZG16O60844 167 aa18.74■□□□□ 0.59
CTTN-205ENST00000415461 PRKRAO75569 313 aaKnown RBP18.74■□□□□ 0.59
CTTN-205ENST00000415461 ETHE1O95571 254 aa18.74■□□□□ 0.59
CTTN-205ENST00000415461 ABHD2P08910 425 aa18.74■□□□□ 0.59
CTTN-205ENST00000415461 RHOXF2BP0C7M4 288 aa18.74■□□□□ 0.59
CTTN-205ENST00000415461 NEK2P51955 445 aa18.74■□□□□ 0.59
CTTN-205ENST00000415461 ALDH6A1Q02252 535 aaKnown RBP18.74■□□□□ 0.59
CTTN-205ENST00000415461 SERTAD2Q14140 314 aa18.74■□□□□ 0.59
CTTN-205ENST00000415461 ZRSR2Q15696 482 aaKnown RBP18.74■□□□□ 0.59
CTTN-205ENST00000415461 METTL2BQ6P1Q9 378 aaKnown RBP18.74■□□□□ 0.59
CTTN-205ENST00000415461 OR4N5Q8IXE1 308 aa18.74■□□□□ 0.59
CTTN-205ENST00000415461 ZCCHC7Q8N3Z6 543 aaKnown RBP18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms