RNA–Protein interactions for RNA: ENST00000414829.2

LIMS1-206, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 439 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-206ENST00000414829 CHAF1BQ13112 559 aa13.76□□□□□ -0.21
LIMS1-206ENST00000414829 AGBL2Q5U5Z8 902 aa13.76□□□□□ -0.21
LIMS1-206ENST00000414829 HHATQ5VTY9 493 aa13.76□□□□□ -0.21
LIMS1-206ENST00000414829 ACSM2BQ68CK6 577 aa13.76□□□□□ -0.21
LIMS1-206ENST00000414829 COMMD6Q7Z4G1 85 aa13.76□□□□□ -0.21
LIMS1-206ENST00000414829 CUZD1Q86UP6 607 aa13.76□□□□□ -0.21
LIMS1-206ENST00000414829 TANKQ92844 425 aa13.76□□□□□ -0.21
LIMS1-206ENST00000414829 C8orf44Q96CB5 159 aa13.76□□□□□ -0.21
LIMS1-206ENST00000414829 MTFMTQ96DP5 389 aaKnown RBP13.76□□□□□ -0.21
LIMS1-206ENST00000414829 ABHD17AQ96GS6 310 aa13.76□□□□□ -0.21
LIMS1-206ENST00000414829 FAIM2Q9BWQ8 316 aa13.76□□□□□ -0.21
LIMS1-206ENST00000414829 TRIM55Q9BYV6 548 aa13.76□□□□□ -0.21
LIMS1-206ENST00000414829 SHCBP1LQ9BZQ2 653 aa13.76□□□□□ -0.21
LIMS1-206ENST00000414829 A0A1B0GTL3 188 aa13.75□□□□□ -0.21
LIMS1-206ENST00000414829 TCRBV16S1A1N1A0A5B0 115 aa13.75□□□□□ -0.21
LIMS1-206ENST00000414829 TMEM120BA0PK00 339 aa13.75□□□□□ -0.21
LIMS1-206ENST00000414829 SLC28A1O00337 649 aa13.75□□□□□ -0.21
LIMS1-206ENST00000414829 UBFD1O14562 309 aaKnown RBP13.75□□□□□ -0.21
LIMS1-206ENST00000414829 AZIN1O14977 448 aa13.75□□□□□ -0.21
LIMS1-206ENST00000414829 DNAJB5O75953 348 aa13.75□□□□□ -0.21
LIMS1-206ENST00000414829 RSL1D1O76021 490 aaKnown RBP13.75□□□□□ -0.21
LIMS1-206ENST00000414829 ETHE1O95571 254 aa13.75□□□□□ -0.21
LIMS1-206ENST00000414829 TAS2R50P59544 299 aa13.75□□□□□ -0.21
LIMS1-206ENST00000414829 MAGOHP61326 146 aaKnown RBP13.75□□□□□ -0.21
LIMS1-206ENST00000414829 TRA2BP62995 288 aaKnown RBP13.75□□□□□ -0.21
LIMS1-206ENST00000414829 PLIN5Q00G26 463 aa13.75□□□□□ -0.21
LIMS1-206ENST00000414829 PCOLCEQ15113 449 aa13.75□□□□□ -0.21
LIMS1-206ENST00000414829 SFT2D3Q587I9 215 aa13.75□□□□□ -0.21
LIMS1-206ENST00000414829 CCNYL2Q5T2Q4 361 aa13.75□□□□□ -0.21
LIMS1-206ENST00000414829 AGAP7PQ5VUJ5 663 aa13.75□□□□□ -0.21
LIMS1-206ENST00000414829 OR52E8Q6IFG1 317 aa13.75□□□□□ -0.21
LIMS1-206ENST00000414829 MRM1Q6IN84 353 aaKnown RBP13.75□□□□□ -0.21
LIMS1-206ENST00000414829 PAPD4Q6PIY7 484 aaKnown RBP13.75□□□□□ -0.21
LIMS1-206ENST00000414829 TRIM46Q7Z4K8 759 aa13.75□□□□□ -0.21
LIMS1-206ENST00000414829 TRIM42Q8IWZ5 723 aa13.75□□□□□ -0.21
LIMS1-206ENST00000414829 FAM76AQ8TAV0 307 aa13.75□□□□□ -0.21
LIMS1-206ENST00000414829 TLCD1Q96CP7 247 aa13.75□□□□□ -0.21
LIMS1-206ENST00000414829 AGAP4Q96P64 663 aa13.75□□□□□ -0.21
LIMS1-206ENST00000414829 SMAD5Q99717 465 aaKnown RBP13.75□□□□□ -0.21
LIMS1-206ENST00000414829 MAPKAP1Q9BPZ7 522 aa13.75□□□□□ -0.21
LIMS1-206ENST00000414829 MECRQ9BV79 373 aa13.75□□□□□ -0.21
LIMS1-206ENST00000414829 ZNF717Q9BY31 904 aaPredicted RBP13.75□□□□□ -0.21
LIMS1-206ENST00000414829 MRPL1Q9BYD6 325 aaKnown RBP13.75□□□□□ -0.21
LIMS1-206ENST00000414829 ACPTQ9BZG2 426 aa13.75□□□□□ -0.21
LIMS1-206ENST00000414829 EPS8L2Q9H6S3 715 aa13.75□□□□□ -0.21
LIMS1-206ENST00000414829 RPF2Q9H7B2 306 aaKnown RBP13.75□□□□□ -0.21
LIMS1-206ENST00000414829 ADAP2Q9NPF8 381 aa13.75□□□□□ -0.21
LIMS1-206ENST00000414829 FARSBQ9NSD9 589 aaKnown RBP13.75□□□□□ -0.21
LIMS1-206ENST00000414829 KCMF1Q9P0J7 381 aa13.75□□□□□ -0.21
LIMS1-206ENST00000414829 FER1L5A0AVI2 2057 aa13.75□□□□□ -0.21
LIMS1-206ENST00000414829 SAGE2PA6NJ88 616 aa13.74□□□□□ -0.21
LIMS1-206ENST00000414829 RGS14O43566 566 aa13.74□□□□□ -0.21
LIMS1-206ENST00000414829 DPM1O60762 260 aa13.74□□□□□ -0.21
LIMS1-206ENST00000414829 MYO1DO94832 1006 aa13.74□□□□□ -0.21
LIMS1-206ENST00000414829 KLK1P06870 262 aa13.74□□□□□ -0.21
LIMS1-206ENST00000414829 FGF4P08620 206 aa13.74□□□□□ -0.21
LIMS1-206ENST00000414829 DHRS4L1P0CG22 281 aa13.74□□□□□ -0.21
LIMS1-206ENST00000414829 CREB1P16220 341 aa13.74□□□□□ -0.21
LIMS1-206ENST00000414829 MAOAP21397 527 aa13.74□□□□□ -0.21
LIMS1-206ENST00000414829 TBL3Q12788 808 aaKnown RBP13.74□□□□□ -0.21
LIMS1-206ENST00000414829 ELAVL1Q15717 326 aaKnown RBP13.74□□□□□ -0.21
LIMS1-206ENST00000414829 BTBD16Q32M84 506 aa13.74□□□□□ -0.21
LIMS1-206ENST00000414829 ARL13AQ5H913 290 aaPredicted RBP13.74□□□□□ -0.21
LIMS1-206ENST00000414829 CRB2Q5IJ48 1285 aa13.74□□□□□ -0.21
LIMS1-206ENST00000414829 SPDYAQ5MJ70 313 aa13.74□□□□□ -0.21
LIMS1-206ENST00000414829 PCSK4Q6UW60 755 aa13.74□□□□□ -0.21
LIMS1-206ENST00000414829 LANCL3Q6ZV70 420 aa13.74□□□□□ -0.21
LIMS1-206ENST00000414829 ASB18Q6ZVZ8 466 aa13.74□□□□□ -0.21
LIMS1-206ENST00000414829 SAMD14Q8IZD0 417 aaPredicted RBP13.74□□□□□ -0.21
LIMS1-206ENST00000414829 CLYBLQ8N0X4 340 aa13.74□□□□□ -0.21
LIMS1-206ENST00000414829 TMEM132CQ8N3T6 1108 aa13.74□□□□□ -0.21
LIMS1-206ENST00000414829 RNF175Q8N4F7 328 aa13.74□□□□□ -0.21
LIMS1-206ENST00000414829 SLC5A8Q8N695 610 aa13.74□□□□□ -0.21
LIMS1-206ENST00000414829 EXD3Q8N9H8 876 aa13.74□□□□□ -0.21
LIMS1-206ENST00000414829 FDCSPQ8NFU4 85 aa13.74□□□□□ -0.21
LIMS1-206ENST00000414829 RAB3IL1Q8TBN0 382 aa13.74□□□□□ -0.21
LIMS1-206ENST00000414829 M1APQ8TC57 530 aa13.74□□□□□ -0.21
LIMS1-206ENST00000414829 DAZLQ92904 295 aaKnown RBP13.74□□□□□ -0.21
LIMS1-206ENST00000414829 TSLPQ969D9 159 aa13.74□□□□□ -0.21
LIMS1-206ENST00000414829 THOC3Q96J01 351 aaKnown RBP13.74□□□□□ -0.21
LIMS1-206ENST00000414829 MLXIPLQ9NP71 852 aa13.74□□□□□ -0.21
LIMS1-206ENST00000414829 MMP25Q9NPA2 562 aa13.74□□□□□ -0.21
LIMS1-206ENST00000414829 ABI3Q9P2A4 366 aa13.74□□□□□ -0.21
LIMS1-206ENST00000414829 MCM8Q9UJA3 840 aa13.74□□□□□ -0.21
LIMS1-206ENST00000414829 FBXW2Q9UKT8 454 aa13.74□□□□□ -0.21
LIMS1-206ENST00000414829 WBP11Q9Y2W2 641 aaKnown RBP13.74□□□□□ -0.21
LIMS1-206ENST00000414829 TIMM22Q9Y584 194 aa13.74□□□□□ -0.21
LIMS1-206ENST00000414829 CACNA1GO43497 2377 aa13.73□□□□□ -0.21
LIMS1-206ENST00000414829 A6NL46 340 aa13.73□□□□□ -0.21
LIMS1-206ENST00000414829 HMGB1P1B2RPK0 211 aaPredicted RBP13.73□□□□□ -0.21
LIMS1-206ENST00000414829 FAM227AF5H4B4 570 aa13.73□□□□□ -0.21
LIMS1-206ENST00000414829 CDK2AP1O14519 115 aa13.73□□□□□ -0.21
LIMS1-206ENST00000414829 PROM1O43490 865 aa13.73□□□□□ -0.21
LIMS1-206ENST00000414829 EEDO75530 441 aaKnown RBP13.73□□□□□ -0.21
LIMS1-206ENST00000414829 SEC24DO94855 1032 aaPredicted RBP13.73□□□□□ -0.21
LIMS1-206ENST00000414829 HSPA4LO95757 839 aa13.73□□□□□ -0.21
LIMS1-206ENST00000414829 PRR35P0CG20 571 aa13.73□□□□□ -0.21
LIMS1-206ENST00000414829 LY6DQ14210 128 aa13.73□□□□□ -0.21
LIMS1-206ENST00000414829 CHI3L2Q15782 390 aa13.73□□□□□ -0.21
LIMS1-206ENST00000414829 KANK2Q63ZY3 851 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms