RNA–Protein interactions for RNA: ENST00000414558.2

ATG4C-204, Transcript of autophagy related 4C cysteine peptidase, humanhuman

TSL 5

Gene ATG4C, Length 464 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4C-204ENST00000414558 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP3.78□□□□□ -1.8
ATG4C-204ENST00000414558 ARMCX1Q9P291 453 aa3.78□□□□□ -1.8
ATG4C-204ENST00000414558 IKZF3Q9UKT9 509 aa3.78□□□□□ -1.8
ATG4C-204ENST00000414558 FBXO7Q9Y3I1 522 aa3.78□□□□□ -1.8
ATG4C-204ENST00000414558 GON4LQ3T8J9 2241 aa3.77□□□□□ -1.81
ATG4C-204ENST00000414558 TRAV9-2A0A087WT02 112 aa3.77□□□□□ -1.81
ATG4C-204ENST00000414558 ILVBLA1L0T0 632 aa3.77□□□□□ -1.81
ATG4C-204ENST00000414558 E2F3O00716 465 aa3.77□□□□□ -1.81
ATG4C-204ENST00000414558 FIBPO43427 364 aa3.77□□□□□ -1.81
ATG4C-204ENST00000414558 B4GAT1O43505 415 aa3.77□□□□□ -1.81
ATG4C-204ENST00000414558 NPBWR1P48145 328 aa3.77□□□□□ -1.81
ATG4C-204ENST00000414558 LTB4RQ15722 352 aa3.77□□□□□ -1.81
ATG4C-204ENST00000414558 ZNF79Q15937 498 aa3.77□□□□□ -1.81
ATG4C-204ENST00000414558 TMEM64Q6YI46 380 aa3.77□□□□□ -1.81
ATG4C-204ENST00000414558 ZNF600Q6ZNG1 722 aa3.77□□□□□ -1.81
ATG4C-204ENST00000414558 ZNRF1Q8ND25 227 aa3.77□□□□□ -1.81
ATG4C-204ENST00000414558 SEPT8Q92599 483 aa3.77□□□□□ -1.81
ATG4C-204ENST00000414558 BSCL2Q96G97 398 aaPredicted RBP3.77□□□□□ -1.81
ATG4C-204ENST00000414558 ZNF274Q96GC6 653 aaPredicted RBP3.77□□□□□ -1.81
ATG4C-204ENST00000414558 LINC00167Q96N53 147 aa3.77□□□□□ -1.81
ATG4C-204ENST00000414558 TEX13BQ9BXU2 312 aa3.77□□□□□ -1.81
ATG4C-204ENST00000414558 PFASO15067 1338 aa3.76□□□□□ -1.81
ATG4C-204ENST00000414558 FAM205AQ6ZU69 1335 aa3.76□□□□□ -1.81
ATG4C-204ENST00000414558 OR5H15A6NDH6 313 aa3.76□□□□□ -1.81
ATG4C-204ENST00000414558 ZNF724A8MTY0 619 aa3.76□□□□□ -1.81
ATG4C-204ENST00000414558 ZNF487B1APH4 448 aa3.76□□□□□ -1.81
ATG4C-204ENST00000414558 SKILP12757 684 aa3.76□□□□□ -1.81
ATG4C-204ENST00000414558 ZBTB25P24278 435 aa3.76□□□□□ -1.81
ATG4C-204ENST00000414558 IST1P53990 364 aa3.76□□□□□ -1.81
ATG4C-204ENST00000414558 NUCB1Q02818 461 aa3.76□□□□□ -1.81
ATG4C-204ENST00000414558 CRMP1Q14194 572 aa3.76□□□□□ -1.81
ATG4C-204ENST00000414558 Q6ZVH6 145 aa3.76□□□□□ -1.81
ATG4C-204ENST00000414558 SMYD1Q8NB12 490 aa3.76□□□□□ -1.81
ATG4C-204ENST00000414558 PPP1R16AQ96I34 528 aa3.76□□□□□ -1.81
ATG4C-204ENST00000414558 RANBP9Q96S59 729 aa3.76□□□□□ -1.81
ATG4C-204ENST00000414558 ZBP1Q9H171 429 aa3.76□□□□□ -1.81
ATG4C-204ENST00000414558 MINDY3Q9H8M7 445 aa3.76□□□□□ -1.81
ATG4C-204ENST00000414558 CHCHD3Q9NX63 227 aaKnown RBP3.76□□□□□ -1.81
ATG4C-204ENST00000414558 RSPH14Q9UHP6 348 aa3.76□□□□□ -1.81
ATG4C-204ENST00000414558 ARHGEF37A1IGU5 675 aa3.75□□□□□ -1.81
ATG4C-204ENST00000414558 CCDC162PA2VCL2 907 aa3.75□□□□□ -1.81
ATG4C-204ENST00000414558 ZSCAN5CA6NGD5 496 aaPredicted RBP3.75□□□□□ -1.81
ATG4C-204ENST00000414558 ANKDD1BA6NHY2 528 aa3.75□□□□□ -1.81
ATG4C-204ENST00000414558 SRRM4A7MD48 611 aaKnown RBP3.75□□□□□ -1.81
ATG4C-204ENST00000414558 NEDD8-MDP1E9PL57 170 aa3.75□□□□□ -1.81
ATG4C-204ENST00000414558 H0Y9J4 135 aa3.75□□□□□ -1.81
ATG4C-204ENST00000414558 RHBDL1O75783 438 aa3.75□□□□□ -1.81
ATG4C-204ENST00000414558 PDGFBP01127 241 aaPredicted RBP3.75□□□□□ -1.81
ATG4C-204ENST00000414558 LYNP07948 512 aa3.75□□□□□ -1.81
ATG4C-204ENST00000414558 GIG44P09565 113 aaPredicted RBP3.75□□□□□ -1.81
ATG4C-204ENST00000414558 OR9G9P0C7N8 305 aa3.75□□□□□ -1.81
ATG4C-204ENST00000414558 TSPY3P0CV98 308 aa3.75□□□□□ -1.81
ATG4C-204ENST00000414558 TSPY8P0CW00 308 aa3.75□□□□□ -1.81
ATG4C-204ENST00000414558 CHRNA3P32297 505 aa3.75□□□□□ -1.81
ATG4C-204ENST00000414558 ALDH3B1P43353 468 aa3.75□□□□□ -1.81
ATG4C-204ENST00000414558 SPATA19Q7Z5L4 167 aa3.75□□□□□ -1.81
ATG4C-204ENST00000414558 SLFN11Q7Z7L1 901 aa3.75□□□□□ -1.81
ATG4C-204ENST00000414558 SAMD12Q8N8I0 201 aa3.75□□□□□ -1.81
ATG4C-204ENST00000414558 FLVCR1-AS1Q8TAF5 88 aa3.75□□□□□ -1.81
ATG4C-204ENST00000414558 SETD6Q8TBK2 473 aa3.75□□□□□ -1.81
ATG4C-204ENST00000414558 ZBED6CLQ96FA7 236 aaPredicted RBP3.75□□□□□ -1.81
ATG4C-204ENST00000414558 PHYHIPLQ96FC7 376 aa3.75□□□□□ -1.81
ATG4C-204ENST00000414558 RBM18Q96H35 190 aaKnown RBP3.75□□□□□ -1.81
ATG4C-204ENST00000414558 MCCC1Q96RQ3 725 aaPredicted RBP3.75□□□□□ -1.81
ATG4C-204ENST00000414558 ZNF319Q9P2F9 582 aa3.75□□□□□ -1.81
ATG4C-204ENST00000414558 CFDP1Q9UEE9 299 aaPredicted RBP3.75□□□□□ -1.81
ATG4C-204ENST00000414558 ITGA11Q9UKX5 1188 aa3.75□□□□□ -1.81
ATG4C-204ENST00000414558 LRRTM2O43300 516 aa3.74□□□□□ -1.81
ATG4C-204ENST00000414558 FHITP49789 147 aa3.74□□□□□ -1.81
ATG4C-204ENST00000414558 HMGCS2P54868 508 aa3.74□□□□□ -1.81
ATG4C-204ENST00000414558 GSTO1P78417 241 aa3.74□□□□□ -1.81
ATG4C-204ENST00000414558 FOLH1Q04609 750 aa3.74□□□□□ -1.81
ATG4C-204ENST00000414558 ALKBH5Q6P6C2 394 aaKnown RBP3.74□□□□□ -1.81
ATG4C-204ENST00000414558 ZNF730Q6ZMV8 503 aa3.74□□□□□ -1.81
ATG4C-204ENST00000414558 CACUL1Q86Y37 369 aa3.74□□□□□ -1.81
ATG4C-204ENST00000414558 NAXDQ8IW45 347 aa3.74□□□□□ -1.81
ATG4C-204ENST00000414558 ZNF444Q8N0Y2 327 aaPredicted RBP3.74□□□□□ -1.81
ATG4C-204ENST00000414558 OR8H2Q8N162 312 aa3.74□□□□□ -1.81
ATG4C-204ENST00000414558 GPR148Q8TDV2 347 aa3.74□□□□□ -1.81
ATG4C-204ENST00000414558 EXOC4Q96A65 974 aa3.74□□□□□ -1.81
ATG4C-204ENST00000414558 SGF29Q96ES7 293 aa3.74□□□□□ -1.81
ATG4C-204ENST00000414558 ATG101Q9BSB4 218 aa3.74□□□□□ -1.81
ATG4C-204ENST00000414558 NT5DC2Q9H857 520 aa3.74□□□□□ -1.81
ATG4C-204ENST00000414558 PDFQ9HBH1 243 aa3.74□□□□□ -1.81
ATG4C-204ENST00000414558 NFKBIL1Q9UBC1 381 aaPredicted RBP3.74□□□□□ -1.81
ATG4C-204ENST00000414558 KBTBD13C9JR72 458 aa3.73□□□□□ -1.81
ATG4C-204ENST00000414558 SELENOFO60613 162 aa3.73□□□□□ -1.81
ATG4C-204ENST00000414558 SIX3O95343 332 aaPredicted RBP3.73□□□□□ -1.81
ATG4C-204ENST00000414558 PRKCIP41743 596 aa3.73□□□□□ -1.81
ATG4C-204ENST00000414558 IER3P46695 156 aa3.73□□□□□ -1.81
ATG4C-204ENST00000414558 RGRP47804 291 aa3.73□□□□□ -1.81
ATG4C-204ENST00000414558 ABRAXAS2Q15018 415 aa3.73□□□□□ -1.81
ATG4C-204ENST00000414558 C17orf58Q2M2W7 97 aa3.73□□□□□ -1.81
ATG4C-204ENST00000414558 LYPLAL1Q5VWZ2 237 aa3.73□□□□□ -1.81
ATG4C-204ENST00000414558 PM20D1Q6GTS8 502 aa3.73□□□□□ -1.81
ATG4C-204ENST00000414558 CCDC71Q8IV32 467 aaPredicted RBP3.73□□□□□ -1.81
ATG4C-204ENST00000414558 Q8NFD4 153 aa3.73□□□□□ -1.81
ATG4C-204ENST00000414558 GTSF1Q8WW33 167 aa3.73□□□□□ -1.81
ATG4C-204ENST00000414558 CKAP2Q8WWK9 683 aa3.73□□□□□ -1.81
ATG4C-204ENST00000414558 ERO1AQ96HE7 468 aa3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms