RNA–Protein interactions for RNA: ENST00000413987.1

SNHG3-201, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 1 (best)

Gene SNHG3, Length 2,201 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-201ENST00000413987 VANGL2Q9ULK5 521 aa8.99□□□□□ -0.97
SNHG3-201ENST00000413987 OAZ3Q9UMX2 235 aa8.99□□□□□ -0.97
SNHG3-201ENST00000413987 PRRC2BQ5JSZ5 2229 aaKnown RBP8.99□□□□□ -0.97
SNHG3-201ENST00000413987 F8WDY8 70 aa8.99□□□□□ -0.97
SNHG3-201ENST00000413987 EEF2KO00418 725 aaKnown RBP8.99□□□□□ -0.97
SNHG3-201ENST00000413987 UGT2B11O75310 529 aa8.99□□□□□ -0.97
SNHG3-201ENST00000413987 BCAS1O75363 584 aaPredicted RBP8.99□□□□□ -0.97
SNHG3-201ENST00000413987 CRCPO75575 148 aa8.99□□□□□ -0.97
SNHG3-201ENST00000413987 HSD17B1P14061 328 aa8.99□□□□□ -0.97
SNHG3-201ENST00000413987 MC5RP33032 325 aa8.99□□□□□ -0.97
SNHG3-201ENST00000413987 SLC7A2P52569 658 aa8.99□□□□□ -0.97
SNHG3-201ENST00000413987 MLLT10P55197 1068 aa8.99□□□□□ -0.97
SNHG3-201ENST00000413987 TNK2Q07912 1038 aa8.99□□□□□ -0.97
SNHG3-201ENST00000413987 TOP3AQ13472 1001 aaPredicted RBP8.99□□□□□ -0.97
SNHG3-201ENST00000413987 LARS2Q15031 903 aaKnown RBP8.99□□□□□ -0.97
SNHG3-201ENST00000413987 ARTNQ5T4W7 220 aa8.99□□□□□ -0.97
SNHG3-201ENST00000413987 UGT3A1Q6NUS8 523 aa8.99□□□□□ -0.97
SNHG3-201ENST00000413987 MTSS1LQ765P7 747 aa8.99□□□□□ -0.97
SNHG3-201ENST00000413987 TMC8Q8IU68 726 aa8.99□□□□□ -0.97
SNHG3-201ENST00000413987 ARL14EPQ8N8R7 260 aaPredicted RBP8.99□□□□□ -0.97
SNHG3-201ENST00000413987 VN1R2Q8NFZ6 395 aa8.99□□□□□ -0.97
SNHG3-201ENST00000413987 HTR3CQ8WXA8 447 aa8.99□□□□□ -0.97
SNHG3-201ENST00000413987 TBRG4Q969Z0 631 aaKnown RBP eCLIP8.99□□□□□ -0.973e-18■□□□□ 11.2
SNHG3-201ENST00000413987 KIAA1143Q96AT1 154 aaPredicted RBP8.99□□□□□ -0.97
SNHG3-201ENST00000413987 SERPINB11Q96P15 392 aa8.99□□□□□ -0.97
SNHG3-201ENST00000413987 LGMNQ99538 433 aa8.99□□□□□ -0.97
SNHG3-201ENST00000413987 LHPPQ9H008 270 aa8.99□□□□□ -0.97
SNHG3-201ENST00000413987 ING2Q9H160 280 aa8.99□□□□□ -0.97
SNHG3-201ENST00000413987 CLEC4MQ9H2X3 399 aaPredicted RBP8.99□□□□□ -0.97
SNHG3-201ENST00000413987 SLC32A1Q9H598 525 aa8.99□□□□□ -0.97
SNHG3-201ENST00000413987 ATP13A3Q9H7F0 1226 aa8.99□□□□□ -0.97
SNHG3-201ENST00000413987 SLC28A3Q9HAS3 691 aa8.99□□□□□ -0.97
SNHG3-201ENST00000413987 GPR27Q9NS67 375 aa8.99□□□□□ -0.97
SNHG3-201ENST00000413987 TRPC4Q9UBN4 977 aa8.99□□□□□ -0.97
SNHG3-201ENST00000413987 WARS2Q9UGM6 360 aaKnown RBP8.99□□□□□ -0.97
SNHG3-201ENST00000413987 ENPP5Q9UJA9 477 aa8.99□□□□□ -0.97
SNHG3-201ENST00000413987 OSGIN1Q9UJX0 560 aa8.99□□□□□ -0.97
SNHG3-201ENST00000413987 NEU3Q9UQ49 428 aa8.99□□□□□ -0.97
SNHG3-201ENST00000413987 IRAK3Q9Y616 596 aa8.99□□□□□ -0.97
SNHG3-201ENST00000413987 ANAPC1Q9H1A4 1944 aa8.98□□□□□ -0.97
SNHG3-201ENST00000413987 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.98□□□□□ -0.97
SNHG3-201ENST00000413987 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.98□□□□□ -0.97
SNHG3-201ENST00000413987 PRR23D1E9PI22 279 aaPredicted RBP8.98□□□□□ -0.97
SNHG3-201ENST00000413987 PLK4O00444 970 aa8.98□□□□□ -0.97
SNHG3-201ENST00000413987 EI24O14681 340 aa8.98□□□□□ -0.97
SNHG3-201ENST00000413987 SCGB2A1O75556 95 aa8.98□□□□□ -0.97
SNHG3-201ENST00000413987 CDC123O75794 336 aaPredicted RBP8.98□□□□□ -0.97
SNHG3-201ENST00000413987 PRR23D2P0DMB1 279 aaPredicted RBP8.98□□□□□ -0.97
SNHG3-201ENST00000413987 ATP6V1B2P21281 511 aa8.98□□□□□ -0.97
SNHG3-201ENST00000413987 GRK3P35626 688 aa8.98□□□□□ -0.97
SNHG3-201ENST00000413987 SLC15A1P46059 708 aa8.98□□□□□ -0.97
SNHG3-201ENST00000413987 PLA2G16P53816 162 aa8.98□□□□□ -0.97
SNHG3-201ENST00000413987 TPI1P60174 286 aa8.98□□□□□ -0.97
SNHG3-201ENST00000413987 GABARAPL2P60520 117 aa8.98□□□□□ -0.97
SNHG3-201ENST00000413987 CRADDP78560 199 aa8.98□□□□□ -0.97
SNHG3-201ENST00000413987 IFITM2Q01629 132 aa8.98□□□□□ -0.97
SNHG3-201ENST00000413987 SEMA3BQ13214 749 aa8.98□□□□□ -0.97
SNHG3-201ENST00000413987 PON2Q15165 354 aa8.98□□□□□ -0.97
SNHG3-201ENST00000413987 NKAIN1Q4KMZ8 207 aa8.98□□□□□ -0.97
SNHG3-201ENST00000413987 FAM98BQ52LJ0 330 aaKnown RBP8.98□□□□□ -0.97
SNHG3-201ENST00000413987 CLVS2Q5SYC1 327 aa8.98□□□□□ -0.97
SNHG3-201ENST00000413987 RAP1GAP2Q684P5 730 aa8.98□□□□□ -0.97
SNHG3-201ENST00000413987 XAF1Q6GPH4 301 aa8.98□□□□□ -0.97
SNHG3-201ENST00000413987 PIWIL4Q7Z3Z4 852 aaKnown RBP8.98□□□□□ -0.97
SNHG3-201ENST00000413987 ASPGQ86U10 573 aa8.98□□□□□ -0.97
SNHG3-201ENST00000413987 SLCO6A1Q86UG4 719 aa8.98□□□□□ -0.97
SNHG3-201ENST00000413987 OFCC1Q8IZS5 231 aa8.98□□□□□ -0.97
SNHG3-201ENST00000413987 CFAP52Q8N1V2 620 aa8.98□□□□□ -0.97
SNHG3-201ENST00000413987 OR52J3Q8NH60 311 aa8.98□□□□□ -0.97
SNHG3-201ENST00000413987 ING5Q8WYH8 240 aa8.98□□□□□ -0.97
SNHG3-201ENST00000413987 BCL2L2Q92843 193 aaPredicted RBP8.98□□□□□ -0.97
SNHG3-201ENST00000413987 RAX2Q96IS3 184 aa8.98□□□□□ -0.97
SNHG3-201ENST00000413987 MRGPRX1Q96LB2 322 aa8.98□□□□□ -0.97
SNHG3-201ENST00000413987 CSF3RQ99062 836 aa8.98□□□□□ -0.97
SNHG3-201ENST00000413987 PITHD1Q9GZP4 211 aaPredicted RBP8.98□□□□□ -0.97
SNHG3-201ENST00000413987 ATXN3LQ9H3M9 355 aa8.98□□□□□ -0.97
SNHG3-201ENST00000413987 EML4Q9HC35 981 aaKnown RBP8.98□□□□□ -0.97
SNHG3-201ENST00000413987 ANKHQ9HCJ1 492 aa8.98□□□□□ -0.97
SNHG3-201ENST00000413987 GP6Q9HCN6 339 aa8.98□□□□□ -0.97
SNHG3-201ENST00000413987 DNAJC11Q9NVH1 559 aa8.98□□□□□ -0.97
SNHG3-201ENST00000413987 SYBUQ9NX95 663 aa8.98□□□□□ -0.97
SNHG3-201ENST00000413987 LRIT1Q9P2V4 623 aa8.98□□□□□ -0.97
SNHG3-201ENST00000413987 ZNF229Q9UJW7 825 aa8.98□□□□□ -0.97
SNHG3-201ENST00000413987 VWA7Q9Y334 891 aa8.98□□□□□ -0.97
SNHG3-201ENST00000413987 OBSL1O75147 1896 aa8.98□□□□□ -0.97
SNHG3-201ENST00000413987 FAM230AA0A1W2PPH8 454 aa8.97□□□□□ -0.97
SNHG3-201ENST00000413987 BTBD17A6NE02 478 aa8.97□□□□□ -0.97
SNHG3-201ENST00000413987 PSMD11O00231 422 aa8.97□□□□□ -0.97
SNHG3-201ENST00000413987 ZNF197O14709 1029 aa8.97□□□□□ -0.97
SNHG3-201ENST00000413987 AKR7A2O43488 359 aa8.97□□□□□ -0.97
SNHG3-201ENST00000413987 DYRK3O43781 588 aa8.97□□□□□ -0.97
SNHG3-201ENST00000413987 CNTN5O94779 1100 aa8.97□□□□□ -0.97
SNHG3-201ENST00000413987 SERPINA3P01011 423 aa8.97□□□□□ -0.97
SNHG3-201ENST00000413987 F11P03951 625 aa8.97□□□□□ -0.97
SNHG3-201ENST00000413987 CRYGCP07315 174 aa8.97□□□□□ -0.97
SNHG3-201ENST00000413987 CD1BP29016 333 aa8.97□□□□□ -0.97
SNHG3-201ENST00000413987 ATP5C1P36542 298 aaKnown RBP8.97□□□□□ -0.97
SNHG3-201ENST00000413987 POLR2IP36954 125 aaKnown RBP8.97□□□□□ -0.97
SNHG3-201ENST00000413987 ARL4AP40617 200 aa8.97□□□□□ -0.97
SNHG3-201ENST00000413987 SGSHP51688 502 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms