RNA–Protein interactions for RNA: ENST00000413642.7

VEGFA-207, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,197 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-207ENST00000413642 SLAMF1Q13291 335 aa24.56■■□□□ 1.52
VEGFA-207ENST00000413642 SLC29A2Q14542 456 aa24.56■■□□□ 1.52
VEGFA-207ENST00000413642 ADGRD1Q6QNK2 874 aa24.56■■□□□ 1.52
VEGFA-207ENST00000413642 LGI4Q8N135 537 aa24.56■■□□□ 1.52
VEGFA-207ENST00000413642 L3MBTL4Q8NA19 623 aa24.56■■□□□ 1.52
VEGFA-207ENST00000413642 NR4A3Q92570 626 aa24.56■■□□□ 1.52
VEGFA-207ENST00000413642 NCLNQ969V3 563 aa24.56■■□□□ 1.52
VEGFA-207ENST00000413642 ATP6V1E2Q96A05 226 aa24.56■■□□□ 1.52
VEGFA-207ENST00000413642 MTFMTQ96DP5 389 aaKnown RBP24.56■■□□□ 1.52
VEGFA-207ENST00000413642 ALOXE3Q9BYJ1 711 aa24.56■■□□□ 1.52
VEGFA-207ENST00000413642 ADGRE2Q9UHX3 823 aa24.56■■□□□ 1.52
VEGFA-207ENST00000413642 TSC22D4Q9Y3Q8 395 aa24.56■■□□□ 1.52
VEGFA-207ENST00000413642 DOPEY2Q9Y3R5 2298 aa24.55■■□□□ 1.52
VEGFA-207ENST00000413642 STX16-NPEPL1H3BU86 382 aa24.55■■□□□ 1.52
VEGFA-207ENST00000413642 STX16O14662 325 aa24.55■■□□□ 1.52
VEGFA-207ENST00000413642 PRKNO60260 465 aaPredicted RBP24.55■■□□□ 1.52
VEGFA-207ENST00000413642 SMIM24O75264 130 aa24.55■■□□□ 1.52
VEGFA-207ENST00000413642 CLDN9O95484 217 aa24.55■■□□□ 1.52
VEGFA-207ENST00000413642 IFNA16P05015 189 aa24.55■■□□□ 1.52
VEGFA-207ENST00000413642 CPN2P22792 545 aa24.55■■□□□ 1.52
VEGFA-207ENST00000413642 ARL1P40616 181 aaPredicted RBP24.55■■□□□ 1.52
VEGFA-207ENST00000413642 INAQ16352 499 aa24.55■■□□□ 1.52
VEGFA-207ENST00000413642 OR4N5Q8IXE1 308 aa24.55■■□□□ 1.52
VEGFA-207ENST00000413642 WDR20Q8TBZ3 569 aa24.55■■□□□ 1.52
VEGFA-207ENST00000413642 RGMAQ96B86 450 aa24.55■■□□□ 1.52
VEGFA-207ENST00000413642 ANKRD9Q96BM1 317 aaPredicted RBP24.55■■□□□ 1.52
VEGFA-207ENST00000413642 MRPL57Q9BQC6 102 aaKnown RBP24.55■■□□□ 1.52
VEGFA-207ENST00000413642 MRPL46Q9H2W6 279 aaKnown RBP24.55■■□□□ 1.52
VEGFA-207ENST00000413642 ESPL1Q14674 2120 aa24.55■■□□□ 1.52
VEGFA-207ENST00000413642 A0A1B0GTL3 188 aa24.54■■□□□ 1.52
VEGFA-207ENST00000413642 PPP6CO00743 305 aa24.54■■□□□ 1.52
VEGFA-207ENST00000413642 UGDHO60701 494 aa24.54■■□□□ 1.52
VEGFA-207ENST00000413642 EEDO75530 441 aaKnown RBP24.54■■□□□ 1.52
VEGFA-207ENST00000413642 PRKRAO75569 313 aaKnown RBP24.54■■□□□ 1.52
VEGFA-207ENST00000413642 NEURL1O76050 574 aa24.54■■□□□ 1.52
VEGFA-207ENST00000413642 TSPAN8P19075 237 aa24.54■■□□□ 1.52
VEGFA-207ENST00000413642 CLCN2P51788 898 aa24.54■■□□□ 1.52
VEGFA-207ENST00000413642 KCNK10P57789 538 aa24.54■■□□□ 1.52
VEGFA-207ENST00000413642 STX4Q12846 297 aa24.54■■□□□ 1.52
VEGFA-207ENST00000413642 RCN2Q14257 317 aa24.54■■□□□ 1.52
VEGFA-207ENST00000413642 TEX35Q5T0J7 233 aa24.54■■□□□ 1.52
VEGFA-207ENST00000413642 LGSNQ5TDP6 509 aa24.54■■□□□ 1.52
VEGFA-207ENST00000413642 HIST2H2BCQ6DN03 193 aa24.54■■□□□ 1.52
VEGFA-207ENST00000413642 METTL2BQ6P1Q9 378 aaKnown RBP24.54■■□□□ 1.52
VEGFA-207ENST00000413642 TIFABQ6ZNK6 161 aa24.54■■□□□ 1.52
VEGFA-207ENST00000413642 C16orf47Q6ZP98 133 aaPredicted RBP24.54■■□□□ 1.52
VEGFA-207ENST00000413642 ZNF227Q86WZ6 799 aa24.54■■□□□ 1.52
VEGFA-207ENST00000413642 SCMH1Q96GD3 660 aa24.54■■□□□ 1.52
VEGFA-207ENST00000413642 ZNF717Q9BY31 904 aaPredicted RBP24.54■■□□□ 1.52
VEGFA-207ENST00000413642 LIN28AQ9H9Z2 209 aaKnown RBP24.54■■□□□ 1.52
VEGFA-207ENST00000413642 ADAP2Q9NPF8 381 aa24.54■■□□□ 1.52
VEGFA-207ENST00000413642 SEMA4BQ9NPR2 832 aaPredicted RBP24.54■■□□□ 1.52
VEGFA-207ENST00000413642 TMEM216Q9P0N5 145 aa24.54■■□□□ 1.52
VEGFA-207ENST00000413642 LRFN1Q9P244 771 aa24.54■■□□□ 1.52
VEGFA-207ENST00000413642 TMCO1Q9UM00 188 aa24.54■■□□□ 1.52
VEGFA-207ENST00000413642 PPIEQ9UNP9 301 aaKnown RBP24.54■■□□□ 1.52
VEGFA-207ENST00000413642 USP9XQ93008 2570 aaPredicted RBP24.54■■□□□ 1.52
VEGFA-207ENST00000413642 LRRK2Q5S007 2527 aa24.53■■□□□ 1.52
VEGFA-207ENST00000413642 PTX3P26022 381 aaPredicted RBP24.53■■□□□ 1.52
VEGFA-207ENST00000413642 CCNG1P51959 295 aa24.53■■□□□ 1.52
VEGFA-207ENST00000413642 HNRNPH2P55795 449 aaKnown RBP24.53■■□□□ 1.52
VEGFA-207ENST00000413642 TRAF3Q13114 568 aa24.53■■□□□ 1.52
VEGFA-207ENST00000413642 TERF2Q15554 542 aa24.53■■□□□ 1.52
VEGFA-207ENST00000413642 C18orf63Q68DL7 685 aa24.53■■□□□ 1.52
VEGFA-207ENST00000413642 ZNF321PQ8N8H1 164 aa24.53■■□□□ 1.52
VEGFA-207ENST00000413642 PTPMT1Q8WUK0 201 aaPredicted RBP24.53■■□□□ 1.52
VEGFA-207ENST00000413642 REPS1Q96D71 796 aa24.53■■□□□ 1.52
VEGFA-207ENST00000413642 VMP1Q96GC9 406 aa24.53■■□□□ 1.52
VEGFA-207ENST00000413642 ATG4BQ9Y4P1 393 aa24.53■■□□□ 1.52
VEGFA-207ENST00000413642 RP1L1Q8IWN7 2480 aaPredicted RBP24.53■■□□□ 1.52
VEGFA-207ENST00000413642 WASHC1A8K0Z3 465 aa24.52■■□□□ 1.52
VEGFA-207ENST00000413642 A8MT66 165 aa24.52■■□□□ 1.52
VEGFA-207ENST00000413642 GOLGA8RI6L899 631 aa24.52■■□□□ 1.52
VEGFA-207ENST00000413642 FGF17O60258 216 aa24.52■■□□□ 1.52
VEGFA-207ENST00000413642 RPS17P08708 135 aaKnown RBP24.52■■□□□ 1.52
VEGFA-207ENST00000413642 CD46P15529 392 aa24.52■■□□□ 1.52
VEGFA-207ENST00000413642 BSGP35613 385 aa24.52■■□□□ 1.52
VEGFA-207ENST00000413642 CDH13P55290 713 aa24.52■■□□□ 1.52
VEGFA-207ENST00000413642 ELAVL1Q15717 326 aaKnown RBP24.52■■□□□ 1.52
VEGFA-207ENST00000413642 SLC25A25Q6KCM7 469 aa24.52■■□□□ 1.52
VEGFA-207ENST00000413642 GALNTL5Q7Z4T8 443 aa24.52■■□□□ 1.52
VEGFA-207ENST00000413642 C5orf34Q96MH7 638 aa24.52■■□□□ 1.52
VEGFA-207ENST00000413642 VTI1BQ9UEU0 232 aa24.52■■□□□ 1.52
VEGFA-207ENST00000413642 SLC5A6Q9Y289 635 aa24.52■■□□□ 1.52
VEGFA-207ENST00000413642 A1L4Q6 167 aa24.51■■□□□ 1.51
VEGFA-207ENST00000413642 FOXO6A8MYZ6 492 aa24.51■■□□□ 1.51
VEGFA-207ENST00000413642 TMPRSS11DO60235 418 aa24.51■■□□□ 1.51
VEGFA-207ENST00000413642 LDLRP01130 860 aa24.51■■□□□ 1.51
VEGFA-207ENST00000413642 CRYABP02511 175 aaKnown RBP24.51■■□□□ 1.51
VEGFA-207ENST00000413642 SP1P08047 785 aa24.51■■□□□ 1.51
VEGFA-207ENST00000413642 TNNI3P19429 210 aa24.51■■□□□ 1.51
VEGFA-207ENST00000413642 PHEXP78562 749 aa24.51■■□□□ 1.51
VEGFA-207ENST00000413642 SGO1Q5FBB7 561 aa24.51■■□□□ 1.51
VEGFA-207ENST00000413642 GPR180Q86V85 440 aa24.51■■□□□ 1.51
VEGFA-207ENST00000413642 ARMC10Q8N2F6 343 aa24.51■■□□□ 1.51
VEGFA-207ENST00000413642 TMEM132CQ8N3T6 1108 aa24.51■■□□□ 1.51
VEGFA-207ENST00000413642 OR4F6Q8NGB9 312 aa24.51■■□□□ 1.51
VEGFA-207ENST00000413642 DNAJB8Q8NHS0 232 aa24.51■■□□□ 1.51
VEGFA-207ENST00000413642 DOK4Q8TEW6 326 aa24.51■■□□□ 1.51
VEGFA-207ENST00000413642 ZNF483Q8TF39 744 aaPredicted RBP24.51■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms