RNA–Protein interactions for RNA: ENST00000413593.5

TMEM248-202, Transcript of transmembrane protein 248, humanhuman

TSL 4

Gene TMEM248, Length 637 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-202ENST00000413593 DDX31Q9H8H2 851 aaKnown RBP9.44□□□□□ -0.9
TMEM248-202ENST00000413593 MMP25Q9NPA2 562 aa9.44□□□□□ -0.9
TMEM248-202ENST00000413593 MKS1Q9NXB0 559 aa9.44□□□□□ -0.9
TMEM248-202ENST00000413593 LUZP4Q9P127 313 aa9.44□□□□□ -0.9
TMEM248-202ENST00000413593 TRPS1Q9UHF7 1281 aa9.44□□□□□ -0.9
TMEM248-202ENST00000413593 FBXW2Q9UKT8 454 aa9.44□□□□□ -0.9
TMEM248-202ENST00000413593 PLAAQ9Y263 795 aa9.44□□□□□ -0.9
TMEM248-202ENST00000413593 B3GNT3Q9Y2A9 372 aa9.44□□□□□ -0.9
TMEM248-202ENST00000413593 STK38LQ9Y2H1 464 aa9.44□□□□□ -0.9
TMEM248-202ENST00000413593 CSAG2Q9Y5P2 127 aa9.44□□□□□ -0.9
TMEM248-202ENST00000413593 SPACA6W5XKT8 324 aa9.44□□□□□ -0.9
TMEM248-202ENST00000413593 CCDC88CQ9P219 2028 aa9.44□□□□□ -0.9
TMEM248-202ENST00000413593 A0A0A6YYD5 115 aa9.43□□□□□ -0.9
TMEM248-202ENST00000413593 BLACEA4D250 179 aa9.43□□□□□ -0.9
TMEM248-202ENST00000413593 SAGE2PA6NJ88 616 aa9.43□□□□□ -0.9
TMEM248-202ENST00000413593 TTLL8A6PVC2 850 aa9.43□□□□□ -0.9
TMEM248-202ENST00000413593 A8MUA0 341 aa9.43□□□□□ -0.9
TMEM248-202ENST00000413593 PYCARD-AS1I3L0S3 204 aa9.43□□□□□ -0.9
TMEM248-202ENST00000413593 MANBAO00462 879 aa9.43□□□□□ -0.9
TMEM248-202ENST00000413593 TMPRSS11DO60235 418 aa9.43□□□□□ -0.9
TMEM248-202ENST00000413593 MLYCDO95822 493 aa9.43□□□□□ -0.9
TMEM248-202ENST00000413593 PDYNP01213 254 aa9.43□□□□□ -0.9
TMEM248-202ENST00000413593 UQCRHP07919 91 aa9.43□□□□□ -0.9
TMEM248-202ENST00000413593 CPA3P15088 417 aa9.43□□□□□ -0.9
TMEM248-202ENST00000413593 CPN2P22792 545 aa9.43□□□□□ -0.9
TMEM248-202ENST00000413593 PPP2R1BP30154 601 aa9.43□□□□□ -0.9
TMEM248-202ENST00000413593 DEKP35659 375 aaKnown RBP9.43□□□□□ -0.9
TMEM248-202ENST00000413593 NAGLUP54802 743 aa9.43□□□□□ -0.9
TMEM248-202ENST00000413593 MLLT10P55197 1068 aa9.43□□□□□ -0.9
TMEM248-202ENST00000413593 PKNOX1P55347 436 aa9.43□□□□□ -0.9
TMEM248-202ENST00000413593 HNRNPH2P55795 449 aaKnown RBP9.43□□□□□ -0.9
TMEM248-202ENST00000413593 DNAJB13P59910 316 aa9.43□□□□□ -0.9
TMEM248-202ENST00000413593 ZNF844Q08AG5 666 aa9.43□□□□□ -0.9
TMEM248-202ENST00000413593 TERF2Q15554 542 aa9.43□□□□□ -0.9
TMEM248-202ENST00000413593 PLEKHN1Q494U1 663 aaPredicted RBP9.43□□□□□ -0.9
TMEM248-202ENST00000413593 TCHHL1Q5QJ38 904 aaPredicted RBP9.43□□□□□ -0.9
TMEM248-202ENST00000413593 MRM1Q6IN84 353 aaKnown RBP9.43□□□□□ -0.9
TMEM248-202ENST00000413593 H3F3CQ6NXT2 135 aa9.43□□□□□ -0.9
TMEM248-202ENST00000413593 GPR180Q86V85 440 aa9.43□□□□□ -0.9
TMEM248-202ENST00000413593 SRRM1Q8IYB3 904 aaKnown RBP9.43□□□□□ -0.9
TMEM248-202ENST00000413593 BANPQ8N9N5 519 aa9.43□□□□□ -0.9
TMEM248-202ENST00000413593 CCDC63Q8NA47 563 aa9.43□□□□□ -0.9
TMEM248-202ENST00000413593 NFAM1Q8NET5 270 aaPredicted RBP9.43□□□□□ -0.9
TMEM248-202ENST00000413593 DNAJB14Q8TBM8 379 aa9.43□□□□□ -0.9
TMEM248-202ENST00000413593 SELENOMQ8WWX9 145 aa9.43□□□□□ -0.9
TMEM248-202ENST00000413593 MARVELD3Q96A59 401 aa9.43□□□□□ -0.9
TMEM248-202ENST00000413593 SLC29A3Q9BZD2 475 aa9.43□□□□□ -0.9
TMEM248-202ENST00000413593 KCNK13Q9HB14 408 aa9.43□□□□□ -0.9
TMEM248-202ENST00000413593 SLAMF7Q9NQ25 335 aa9.43□□□□□ -0.9
TMEM248-202ENST00000413593 FARSBQ9NSD9 589 aaKnown RBP9.43□□□□□ -0.9
TMEM248-202ENST00000413593 OXSMQ9NWU1 459 aa9.43□□□□□ -0.9
TMEM248-202ENST00000413593 MS4A12Q9NXJ0 267 aa9.43□□□□□ -0.9
TMEM248-202ENST00000413593 PHF11Q9UIL8 331 aa9.43□□□□□ -0.9
TMEM248-202ENST00000413593 SNX6Q9UNH7 406 aa9.43□□□□□ -0.9
TMEM248-202ENST00000413593 PLLPQ9Y342 182 aa9.43□□□□□ -0.9
TMEM248-202ENST00000413593 ATG4BQ9Y4P1 393 aa9.43□□□□□ -0.9
TMEM248-202ENST00000413593 SCN3AQ9NY46 2000 aa9.43□□□□□ -0.9
TMEM248-202ENST00000413593 SYNDIG1LA6NDD5 238 aa9.42□□□□□ -0.9
TMEM248-202ENST00000413593 A8MUI8 341 aa9.42□□□□□ -0.9
TMEM248-202ENST00000413593 UBFD1O14562 309 aaKnown RBP9.42□□□□□ -0.9
TMEM248-202ENST00000413593 PROM1O43490 865 aa9.42□□□□□ -0.9
TMEM248-202ENST00000413593 LDB3O75112 727 aa9.42□□□□□ -0.9
TMEM248-202ENST00000413593 MYO1DO94832 1006 aa9.42□□□□□ -0.9
TMEM248-202ENST00000413593 ESRRBO95718 433 aa9.42□□□□□ -0.9
TMEM248-202ENST00000413593 WDPCPO95876 746 aa9.42□□□□□ -0.9
TMEM248-202ENST00000413593 KRT6AP02538 564 aa9.42□□□□□ -0.9
TMEM248-202ENST00000413593 KRT6BP04259 564 aa9.42□□□□□ -0.9
TMEM248-202ENST00000413593 ENO1P06733 434 aaKnown RBP9.42□□□□□ -0.9
TMEM248-202ENST00000413593 FAM58BPP0C7Q3 252 aa9.42□□□□□ -0.9
TMEM248-202ENST00000413593 KRT6CP48668 564 aa9.42□□□□□ -0.9
TMEM248-202ENST00000413593 NAA20P61599 178 aa9.42□□□□□ -0.9
TMEM248-202ENST00000413593 ARG2P78540 354 aa9.42□□□□□ -0.9
TMEM248-202ENST00000413593 TNFRSF17Q02223 184 aa9.42□□□□□ -0.9
TMEM248-202ENST00000413593 ZNF33BQ06732 778 aa9.42□□□□□ -0.9
TMEM248-202ENST00000413593 STX4Q12846 297 aa9.42□□□□□ -0.9
TMEM248-202ENST00000413593 PCLAFQ15004 111 aa9.42□□□□□ -0.9
TMEM248-202ENST00000413593 TLR1Q15399 786 aa9.42□□□□□ -0.9
TMEM248-202ENST00000413593 KRT71Q3SY84 523 aa9.42□□□□□ -0.9
TMEM248-202ENST00000413593 ACER2Q5QJU3 275 aa9.42□□□□□ -0.9
TMEM248-202ENST00000413593 ABHD17BQ5VST6 288 aa9.42□□□□□ -0.9
TMEM248-202ENST00000413593 FRMD7Q6ZUT3 714 aa9.42□□□□□ -0.9
TMEM248-202ENST00000413593 CUZD1Q86UP6 607 aa9.42□□□□□ -0.9
TMEM248-202ENST00000413593 METTL4Q8N3J2 472 aa9.42□□□□□ -0.9
TMEM248-202ENST00000413593 KIF2BQ8N4N8 673 aa9.42□□□□□ -0.9
TMEM248-202ENST00000413593 B3GNT7Q8NFL0 401 aa9.42□□□□□ -0.9
TMEM248-202ENST00000413593 METTL6Q8TCB7 284 aa9.42□□□□□ -0.9
TMEM248-202ENST00000413593 ELP5Q8TE02 316 aa9.42□□□□□ -0.9
TMEM248-202ENST00000413593 AGAP11Q8TF27 550 aa9.42□□□□□ -0.9
TMEM248-202ENST00000413593 HAS2Q92819 552 aa9.42□□□□□ -0.9
TMEM248-202ENST00000413593 ANKRD9Q96BM1 317 aaPredicted RBP9.42□□□□□ -0.9
TMEM248-202ENST00000413593 CNDP1Q96KN2 507 aa9.42□□□□□ -0.9
TMEM248-202ENST00000413593 HBEGFQ99075 208 aa9.42□□□□□ -0.9
TMEM248-202ENST00000413593 NPAS2Q99743 824 aa9.42□□□□□ -0.9
TMEM248-202ENST00000413593 MRPL1Q9BYD6 325 aaKnown RBP9.42□□□□□ -0.9
TMEM248-202ENST00000413593 ALOXE3Q9BYJ1 711 aa9.42□□□□□ -0.9
TMEM248-202ENST00000413593 IQCGQ9H095 443 aaKnown RBP9.42□□□□□ -0.9
TMEM248-202ENST00000413593 RNF32Q9H0A6 362 aa9.42□□□□□ -0.9
TMEM248-202ENST00000413593 ILKAPQ9H0C8 392 aaPredicted RBP9.42□□□□□ -0.9
TMEM248-202ENST00000413593 RPF2Q9H7B2 306 aaKnown RBP9.42□□□□□ -0.9
TMEM248-202ENST00000413593 BRF2Q9HAW0 419 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms