RNA–Protein interactions for RNA: ENST00000412328.5

HSPG2-204, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 828 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-204ENST00000412328 OR4C11Q6IEV9 310 aa16.24■□□□□ 0.19
HSPG2-204ENST00000412328 TUBA3EQ6PEY2 450 aa16.24■□□□□ 0.19
HSPG2-204ENST00000412328 CLNKQ7Z7G1 428 aa16.24■□□□□ 0.19
HSPG2-204ENST00000412328 ZNF227Q86WZ6 799 aa16.24■□□□□ 0.19
HSPG2-204ENST00000412328 MYLK4Q86YV6 388 aaPredicted RBP16.24■□□□□ 0.19
HSPG2-204ENST00000412328 CYP4X1Q8N118 509 aa16.24■□□□□ 0.19
HSPG2-204ENST00000412328 B3GNT7Q8NFL0 401 aa16.24■□□□□ 0.19
HSPG2-204ENST00000412328 OR4F6Q8NGB9 312 aa16.24■□□□□ 0.19
HSPG2-204ENST00000412328 GRHL3Q8TE85 626 aa16.24■□□□□ 0.19
HSPG2-204ENST00000412328 ANKRD9Q96BM1 317 aaPredicted RBP16.24■□□□□ 0.19
HSPG2-204ENST00000412328 SIGLEC12Q96PQ1 595 aa16.24■□□□□ 0.19
HSPG2-204ENST00000412328 SEMA4BQ9NPR2 832 aaPredicted RBP16.24■□□□□ 0.19
HSPG2-204ENST00000412328 SPTBN1Q01082 2364 aaKnown RBP16.23■□□□□ 0.19
HSPG2-204ENST00000412328 TRAV17A0A0B4J275 112 aa16.23■□□□□ 0.19
HSPG2-204ENST00000412328 TMEM200CA6NKL6 621 aa16.23■□□□□ 0.19
HSPG2-204ENST00000412328 GOLGA8RI6L899 631 aa16.23■□□□□ 0.19
HSPG2-204ENST00000412328 CTNSO60931 367 aa16.23■□□□□ 0.19
HSPG2-204ENST00000412328 VPS4BO75351 444 aa16.23■□□□□ 0.19
HSPG2-204ENST00000412328 PRKRAO75569 313 aaKnown RBP16.23■□□□□ 0.19
HSPG2-204ENST00000412328 MYO1DO94832 1006 aa16.23■□□□□ 0.19
HSPG2-204ENST00000412328 GSTA1P08263 222 aa16.23■□□□□ 0.19
HSPG2-204ENST00000412328 RNF224P0DH78 156 aa16.23■□□□□ 0.19
HSPG2-204ENST00000412328 TPP2P29144 1249 aaPredicted RBP16.23■□□□□ 0.19
HSPG2-204ENST00000412328 ST13P50502 369 aaKnown RBP16.23■□□□□ 0.19
HSPG2-204ENST00000412328 HERVK_113P63132 956 aa16.23■□□□□ 0.19
HSPG2-204ENST00000412328 TNFRSF17Q02223 184 aa16.23■□□□□ 0.19
HSPG2-204ENST00000412328 NR6A1Q15406 480 aa16.23■□□□□ 0.19
HSPG2-204ENST00000412328 UNC50Q53HI1 259 aa16.23■□□□□ 0.19
HSPG2-204ENST00000412328 LGSNQ5TDP6 509 aa16.23■□□□□ 0.19
HSPG2-204ENST00000412328 ZNF468Q5VIY5 522 aaPredicted RBP16.23■□□□□ 0.19
HSPG2-204ENST00000412328 CHSY3Q70JA7 882 aa16.23■□□□□ 0.19
HSPG2-204ENST00000412328 EPS8L3Q8TE67 593 aaKnown RBP16.23■□□□□ 0.19
HSPG2-204ENST00000412328 RGMAQ96B86 450 aa16.23■□□□□ 0.19
HSPG2-204ENST00000412328 REPS1Q96D71 796 aa16.23■□□□□ 0.19
HSPG2-204ENST00000412328 SCMH1Q96GD3 660 aa16.23■□□□□ 0.19
HSPG2-204ENST00000412328 ZNF354BQ96LW1 612 aa16.23■□□□□ 0.19
HSPG2-204ENST00000412328 ERVK-6Q9BXR3 956 aa16.23■□□□□ 0.19
HSPG2-204ENST00000412328 DDX31Q9H8H2 851 aaKnown RBP16.23■□□□□ 0.19
HSPG2-204ENST00000412328 ADAP2Q9NPF8 381 aa16.23■□□□□ 0.19
HSPG2-204ENST00000412328 TBK1Q9UHD2 729 aa16.23■□□□□ 0.19
HSPG2-204ENST00000412328 TEKT2Q9UIF3 430 aa16.23■□□□□ 0.19
HSPG2-204ENST00000412328 VPS4AQ9UN37 437 aa16.23■□□□□ 0.19
HSPG2-204ENST00000412328 MRPS33Q9Y291 106 aaKnown RBP16.23■□□□□ 0.19
HSPG2-204ENST00000412328 ASB4Q9Y574 426 aa16.23■□□□□ 0.19
HSPG2-204ENST00000412328 COPG1Q9Y678 874 aaKnown RBP16.23■□□□□ 0.19
HSPG2-204ENST00000412328 NCKAP5O14513 1909 aa16.23■□□□□ 0.19
HSPG2-204ENST00000412328 A8MUA0 341 aa16.22■□□□□ 0.19
HSPG2-204ENST00000412328 A8MUI8 341 aa16.22■□□□□ 0.19
HSPG2-204ENST00000412328 G3V2L1 256 aa16.22■□□□□ 0.19
HSPG2-204ENST00000412328 FGF17O60258 216 aa16.22■□□□□ 0.19
HSPG2-204ENST00000412328 PRKNO60260 465 aaPredicted RBP16.22■□□□□ 0.19
HSPG2-204ENST00000412328 LDB3O75112 727 aa16.22■□□□□ 0.19
HSPG2-204ENST00000412328 NEURL1O76050 574 aa16.22■□□□□ 0.19
HSPG2-204ENST00000412328 SEMA3DO95025 777 aa16.22■□□□□ 0.19
HSPG2-204ENST00000412328 PYGBP11216 843 aa16.22■□□□□ 0.19
HSPG2-204ENST00000412328 TSPAN8P19075 237 aa16.22■□□□□ 0.19
HSPG2-204ENST00000412328 HSD17B3P37058 310 aa16.22■□□□□ 0.19
HSPG2-204ENST00000412328 CCNG1P51959 295 aa16.22■□□□□ 0.19
HSPG2-204ENST00000412328 CDH13P55290 713 aa16.22■□□□□ 0.19
HSPG2-204ENST00000412328 MLF1P58340 268 aa16.22■□□□□ 0.19
HSPG2-204ENST00000412328 ACTN3Q08043 901 aaPredicted RBP16.22■□□□□ 0.19
HSPG2-204ENST00000412328 SLC13A2Q13183 592 aa16.22■□□□□ 0.19
HSPG2-204ENST00000412328 ELAVL1Q15717 326 aaKnown RBP16.22■□□□□ 0.19
HSPG2-204ENST00000412328 MEP1AQ16819 746 aa16.22■□□□□ 0.19
HSPG2-204ENST00000412328 FRG2Q64ET8 278 aa16.22■□□□□ 0.19
HSPG2-204ENST00000412328 OR1N1Q8NGS0 311 aa16.22■□□□□ 0.19
HSPG2-204ENST00000412328 AENQ8WTP8 325 aaKnown RBP16.22■□□□□ 0.19
HSPG2-204ENST00000412328 PTPMT1Q8WUK0 201 aaPredicted RBP16.22■□□□□ 0.19
HSPG2-204ENST00000412328 FAR1Q8WVX9 515 aa16.22■□□□□ 0.19
HSPG2-204ENST00000412328 UBLCP1Q8WVY7 318 aaPredicted RBP16.22■□□□□ 0.19
HSPG2-204ENST00000412328 L3HYPDHQ96EM0 354 aa16.22■□□□□ 0.19
HSPG2-204ENST00000412328 FRG2BQ96QU4 278 aa16.22■□□□□ 0.19
HSPG2-204ENST00000412328 HES7Q9BYE0 225 aa16.22■□□□□ 0.19
HSPG2-204ENST00000412328 SLC29A3Q9BZD2 475 aa16.22■□□□□ 0.19
HSPG2-204ENST00000412328 TRIM45Q9H8W5 580 aaPredicted RBP16.22■□□□□ 0.19
HSPG2-204ENST00000412328 FARSBQ9NSD9 589 aaKnown RBP16.22■□□□□ 0.19
HSPG2-204ENST00000412328 STMN3Q9NZ72 180 aa16.22■□□□□ 0.19
HSPG2-204ENST00000412328 VTI1BQ9UEU0 232 aa16.22■□□□□ 0.19
HSPG2-204ENST00000412328 ATG4BQ9Y4P1 393 aa16.22■□□□□ 0.19
HSPG2-204ENST00000412328 PCDHGB6Q9Y5F9 930 aa16.22■□□□□ 0.19
HSPG2-204ENST00000412328 BLACEA4D250 179 aa16.21■□□□□ 0.19
HSPG2-204ENST00000412328 SYNDIG1LA6NDD5 238 aa16.21■□□□□ 0.19
HSPG2-204ENST00000412328 GABRR3A8MPY1 467 aa16.21■□□□□ 0.19
HSPG2-204ENST00000412328 PRAMEF2O60811 474 aa16.21■□□□□ 0.19
HSPG2-204ENST00000412328 DDAH2O95865 285 aa16.21■□□□□ 0.19
HSPG2-204ENST00000412328 PTX3P26022 381 aaPredicted RBP16.21■□□□□ 0.19
HSPG2-204ENST00000412328 SLAMF1Q13291 335 aa16.21■□□□□ 0.19
HSPG2-204ENST00000412328 AP5B1Q2VPB7 878 aa16.21■□□□□ 0.19
HSPG2-204ENST00000412328 C18orf63Q68DL7 685 aa16.21■□□□□ 0.19
HSPG2-204ENST00000412328 CNPY4Q8N129 248 aa16.21■□□□□ 0.19
HSPG2-204ENST00000412328 FAM26EQ8N5C1 309 aa16.21■□□□□ 0.19
HSPG2-204ENST00000412328 SLC5A8Q8N695 610 aa16.21■□□□□ 0.19
HSPG2-204ENST00000412328 ST6GALNAC3Q8NDV1 305 aa16.21■□□□□ 0.19
HSPG2-204ENST00000412328 ARMC2Q8NEN0 867 aa16.21■□□□□ 0.19
HSPG2-204ENST00000412328 NCLNQ969V3 563 aa16.21■□□□□ 0.19
HSPG2-204ENST00000412328 VMP1Q96GC9 406 aa16.21■□□□□ 0.19
HSPG2-204ENST00000412328 MAGEB10Q96LZ2 347 aaPredicted RBP16.21■□□□□ 0.19
HSPG2-204ENST00000412328 GSTO2Q9H4Y5 243 aa16.21■□□□□ 0.19
HSPG2-204ENST00000412328 PPCSQ9HAB8 311 aa16.21■□□□□ 0.19
HSPG2-204ENST00000412328 TRPS1Q9UHF7 1281 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms