RNA–Protein interactions for RNA: ENST00000409987.5

LSM5-206, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5 BASIC

Gene LSM5, Length 504 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-206ENST00000409987 ASNSP08243 561 aa4.61□□□□□ -1.67
LSM5-206ENST00000409987 IQCF3P0C7M6 154 aa4.61□□□□□ -1.67
LSM5-206ENST00000409987 IGHV4-31P0DP07 118 aa4.61□□□□□ -1.67
LSM5-206ENST00000409987 DLATP10515 647 aaKnown RBP4.61□□□□□ -1.67
LSM5-206ENST00000409987 RPA2P15927 270 aa4.61□□□□□ -1.67
LSM5-206ENST00000409987 NUMBP49757 651 aa4.61□□□□□ -1.67
LSM5-206ENST00000409987 VCPP55072 806 aaKnown RBP4.61□□□□□ -1.67
LSM5-206ENST00000409987 MAZP56270 477 aaKnown RBP4.61□□□□□ -1.67
LSM5-206ENST00000409987 KRTAP10-11P60412 298 aa4.61□□□□□ -1.67
LSM5-206ENST00000409987 CACNG1Q06432 222 aa4.61□□□□□ -1.67
LSM5-206ENST00000409987 SLC3A1Q07837 685 aa4.61□□□□□ -1.67
LSM5-206ENST00000409987 RBBP5Q15291 538 aaKnown RBP4.61□□□□□ -1.67
LSM5-206ENST00000409987 KRT31Q15323 416 aa4.61□□□□□ -1.67
LSM5-206ENST00000409987 RBBP7Q16576 425 aa4.61□□□□□ -1.67
LSM5-206ENST00000409987 OR4A47Q6IF82 309 aa4.61□□□□□ -1.67
LSM5-206ENST00000409987 ANGPTL8Q6UXH0 198 aa4.61□□□□□ -1.67
LSM5-206ENST00000409987 ADGRD2Q7Z7M1 963 aa4.61□□□□□ -1.67
LSM5-206ENST00000409987 STKLD1Q8NE28 680 aa4.61□□□□□ -1.67
LSM5-206ENST00000409987 WBP2Q969T9 261 aa4.61□□□□□ -1.67
LSM5-206ENST00000409987 PGM2Q96G03 612 aa4.61□□□□□ -1.67
LSM5-206ENST00000409987 SENP5Q96HI0 755 aaPredicted RBP4.61□□□□□ -1.67
LSM5-206ENST00000409987 TPD52L3Q96J77 140 aa4.61□□□□□ -1.67
LSM5-206ENST00000409987 MAGED4Q96JG8 741 aa4.61□□□□□ -1.67
LSM5-206ENST00000409987 ZNF607Q96SK3 696 aa4.61□□□□□ -1.67
LSM5-206ENST00000409987 PLIN2Q99541 437 aa4.61□□□□□ -1.67
LSM5-206ENST00000409987 NFKBIZQ9BYH8 718 aa4.61□□□□□ -1.67
LSM5-206ENST00000409987 OR2B2Q9GZK3 357 aa4.61□□□□□ -1.67
LSM5-206ENST00000409987 ZMYND12Q9H0C1 365 aa4.61□□□□□ -1.67
LSM5-206ENST00000409987 SHARPINQ9H0F6 387 aa4.61□□□□□ -1.67
LSM5-206ENST00000409987 VCX2Q9H322 139 aa4.61□□□□□ -1.67
LSM5-206ENST00000409987 GLRX2Q9NS18 164 aa4.61□□□□□ -1.67
LSM5-206ENST00000409987 MIS18AQ9NYP9 233 aa4.61□□□□□ -1.67
LSM5-206ENST00000409987 GTSE1Q9NYZ3 720 aa4.61□□□□□ -1.67
LSM5-206ENST00000409987 TARBP1Q13395 1621 aaKnown RBP4.61□□□□□ -1.67
LSM5-206ENST00000409987 A0A0U1RQV5 110 aa4.6□□□□□ -1.67
LSM5-206ENST00000409987 TMEM89A2RUT3 159 aa4.6□□□□□ -1.67
LSM5-206ENST00000409987 FAM47DPA6NHR8 397 aa4.6□□□□□ -1.67
LSM5-206ENST00000409987 NPIPA3F8WFD2 350 aa4.6□□□□□ -1.67
LSM5-206ENST00000409987 CCL24O00175 119 aa4.6□□□□□ -1.67
LSM5-206ENST00000409987 BMPR1BO00238 502 aa4.6□□□□□ -1.67
LSM5-206ENST00000409987 PES1O00541 588 aaKnown RBP4.6□□□□□ -1.67
LSM5-206ENST00000409987 FGF17O60258 216 aa4.6□□□□□ -1.67
LSM5-206ENST00000409987 CIDEAO60543 219 aa4.6□□□□□ -1.67
LSM5-206ENST00000409987 LRP3O75074 770 aa4.6□□□□□ -1.67
LSM5-206ENST00000409987 STBD1O95210 358 aa4.6□□□□□ -1.67
LSM5-206ENST00000409987 SFTPBP07988 381 aa4.6□□□□□ -1.67
LSM5-206ENST00000409987 NUDT17P0C025 328 aa4.6□□□□□ -1.67
LSM5-206ENST00000409987 CA6P23280 308 aa4.6□□□□□ -1.67
LSM5-206ENST00000409987 PTPN6P29350 595 aa4.6□□□□□ -1.67
LSM5-206ENST00000409987 SSTR1P30872 391 aa4.6□□□□□ -1.67
LSM5-206ENST00000409987 RPL36AP83881 106 aaKnown RBP4.6□□□□□ -1.67
LSM5-206ENST00000409987 TNFRSF17Q02223 184 aa4.6□□□□□ -1.67
LSM5-206ENST00000409987 GPR17Q13304 367 aa4.6□□□□□ -1.67
LSM5-206ENST00000409987 HERC3Q15034 1050 aa4.6□□□□□ -1.67
LSM5-206ENST00000409987 PPP1R7Q15435 360 aa4.6□□□□□ -1.67
LSM5-206ENST00000409987 HSP90AB3PQ58FF7 597 aa4.6□□□□□ -1.67
LSM5-206ENST00000409987 NCR3LG1Q68D85 454 aa4.6□□□□□ -1.67
LSM5-206ENST00000409987 KLHL10Q6JEL2 608 aa4.6□□□□□ -1.67
LSM5-206ENST00000409987 C16orf87Q6PH81 154 aa4.6□□□□□ -1.67
LSM5-206ENST00000409987 FAM159AQ6UWV7 190 aa4.6□□□□□ -1.67
LSM5-206ENST00000409987 RBMS3Q6XE24 437 aaKnown RBP4.6□□□□□ -1.67
LSM5-206ENST00000409987 OTUD6AQ7L8S5 288 aa4.6□□□□□ -1.67
LSM5-206ENST00000409987 CROCCP3Q8IVE0 287 aa4.6□□□□□ -1.67
LSM5-206ENST00000409987 KBTBD8Q8NFY9 601 aa4.6□□□□□ -1.67
LSM5-206ENST00000409987 TRIM58Q8NG06 486 aa4.6□□□□□ -1.67
LSM5-206ENST00000409987 OR6C4Q8NGE1 309 aa4.6□□□□□ -1.67
LSM5-206ENST00000409987 TM9SF4Q92544 642 aa4.6□□□□□ -1.67
LSM5-206ENST00000409987 RFT1Q96AA3 541 aa4.6□□□□□ -1.67
LSM5-206ENST00000409987 MAP3K3Q99759 626 aa4.6□□□□□ -1.67
LSM5-206ENST00000409987 CAPS2Q9BXY5 557 aa4.6□□□□□ -1.67
LSM5-206ENST00000409987 MMP28Q9H239 520 aa4.6□□□□□ -1.67
LSM5-206ENST00000409987 DCLRE1BQ9H816 532 aa4.6□□□□□ -1.67
LSM5-206ENST00000409987 CRLF2Q9HC73 371 aa4.6□□□□□ -1.67
LSM5-206ENST00000409987 YAE1D1Q9NRH1 226 aa4.6□□□□□ -1.67
LSM5-206ENST00000409987 PHPT1Q9NRX4 125 aaPredicted RBP4.6□□□□□ -1.67
LSM5-206ENST00000409987 COPS7AQ9UBW8 275 aa4.6□□□□□ -1.67
LSM5-206ENST00000409987 CHMP2BQ9UQN3 213 aa4.6□□□□□ -1.67
LSM5-206ENST00000409987 SNAPC4Q5SXM2 1469 aa4.6□□□□□ -1.67
LSM5-206ENST00000409987 MAGI1Q96QZ7 1491 aaPredicted RBP4.6□□□□□ -1.67
LSM5-206ENST00000409987 E9PBE3 544 aa4.59□□□□□ -1.67
LSM5-206ENST00000409987 ABCC4O15439 1325 aa4.59□□□□□ -1.67
LSM5-206ENST00000409987 BAG3O95817 575 aa4.59□□□□□ -1.67
LSM5-206ENST00000409987 CHRNGP07510 517 aa4.59□□□□□ -1.67
LSM5-206ENST00000409987 HMBSP08397 361 aa4.59□□□□□ -1.67
LSM5-206ENST00000409987 RRASP10301 218 aa4.59□□□□□ -1.67
LSM5-206ENST00000409987 CYP3A5P20815 502 aa4.59□□□□□ -1.67
LSM5-206ENST00000409987 ATP6V1C1P21283 382 aa4.59□□□□□ -1.67
LSM5-206ENST00000409987 CSTF2P33240 577 aaKnown RBP eCLIP4.59□□□□□ -1.67
LSM5-206ENST00000409987 ADRA1AP35348 466 aa4.59□□□□□ -1.67
LSM5-206ENST00000409987 GLIPR1P48060 266 aa4.59□□□□□ -1.67
LSM5-206ENST00000409987 TNFSF10P50591 281 aa4.59□□□□□ -1.67
LSM5-206ENST00000409987 FKBP1BP68106 108 aa4.59□□□□□ -1.67
LSM5-206ENST00000409987 SQLEQ14534 574 aa4.59□□□□□ -1.67
LSM5-206ENST00000409987 P2RY6Q15077 328 aa4.59□□□□□ -1.67
LSM5-206ENST00000409987 TAF13Q15543 124 aa4.59□□□□□ -1.67
LSM5-206ENST00000409987 SLC25A53Q5H9E4 307 aa4.59□□□□□ -1.67
LSM5-206ENST00000409987 SLC35D3Q5M8T2 416 aa4.59□□□□□ -1.67
LSM5-206ENST00000409987 IL23RQ5VWK5 629 aa4.59□□□□□ -1.67
LSM5-206ENST00000409987 PMF1Q6P1K2 205 aa4.59□□□□□ -1.67
LSM5-206ENST00000409987 TRPT1Q86TN4 253 aaKnown RBP4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms