RNA–Protein interactions for RNA: ENST00000409836.3

GYPC-203, Transcript of glycophorin C (Gerbich blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GYPC, Length 932 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPC-203ENST00000409836 NMRK1Q9NWW6 199 aa13.14□□□□□ -0.31
GYPC-203ENST00000409836 TP53TG5Q9Y2B4 290 aa13.14□□□□□ -0.31
GYPC-203ENST00000409836 ASB4Q9Y574 426 aa13.14□□□□□ -0.31
GYPC-203ENST00000409836 SAGE2PA6NJ88 616 aa13.13□□□□□ -0.31
GYPC-203ENST00000409836 CLDN4O14493 209 aa13.13□□□□□ -0.31
GYPC-203ENST00000409836 CTNSO60931 367 aa13.13□□□□□ -0.31
GYPC-203ENST00000409836 ULK1O75385 1050 aa13.13□□□□□ -0.31
GYPC-203ENST00000409836 EEDO75530 441 aaKnown RBP13.13□□□□□ -0.31
GYPC-203ENST00000409836 CDC123O75794 336 aaPredicted RBP13.13□□□□□ -0.31
GYPC-203ENST00000409836 PDGFAP04085 211 aa13.13□□□□□ -0.31
GYPC-203ENST00000409836 ALPPP05187 535 aa13.13□□□□□ -0.31
GYPC-203ENST00000409836 FGF4P08620 206 aa13.13□□□□□ -0.31
GYPC-203ENST00000409836 PRR35P0CG20 571 aa13.13□□□□□ -0.31
GYPC-203ENST00000409836 ICAM2P13598 275 aa13.13□□□□□ -0.31
GYPC-203ENST00000409836 MAOAP21397 527 aa13.13□□□□□ -0.31
GYPC-203ENST00000409836 PRPH2P23942 346 aa13.13□□□□□ -0.31
GYPC-203ENST00000409836 TPP2P29144 1249 aaPredicted RBP13.13□□□□□ -0.31
GYPC-203ENST00000409836 HMOX2P30519 316 aa13.13□□□□□ -0.31
GYPC-203ENST00000409836 SERPINB4P48594 390 aa13.13□□□□□ -0.31
GYPC-203ENST00000409836 HTR6P50406 440 aa13.13□□□□□ -0.31
GYPC-203ENST00000409836 PGDP52209 483 aa13.13□□□□□ -0.31
GYPC-203ENST00000409836 FOXA1P55317 472 aa13.13□□□□□ -0.31
GYPC-203ENST00000409836 HNRNPH2P55795 449 aaKnown RBP13.13□□□□□ -0.31
GYPC-203ENST00000409836 BTG2P78543 158 aa13.13□□□□□ -0.31
GYPC-203ENST00000409836 EEF1A2Q05639 463 aaKnown RBP13.13□□□□□ -0.31
GYPC-203ENST00000409836 EXT1Q16394 746 aa13.13□□□□□ -0.31
GYPC-203ENST00000409836 CFAP157Q5JU67 520 aa13.13□□□□□ -0.31
GYPC-203ENST00000409836 TCHHL1Q5QJ38 904 aaPredicted RBP13.13□□□□□ -0.31
GYPC-203ENST00000409836 H3F3CQ6NXT2 135 aa13.13□□□□□ -0.31
GYPC-203ENST00000409836 PAGE2Q7Z2X7 111 aa13.13□□□□□ -0.31
GYPC-203ENST00000409836 COMMD6Q7Z4G1 85 aa13.13□□□□□ -0.31
GYPC-203ENST00000409836 KBTBD2Q8IY47 623 aa13.13□□□□□ -0.31
GYPC-203ENST00000409836 LGI4Q8N135 537 aa13.13□□□□□ -0.31
GYPC-203ENST00000409836 ZNF843Q8N446 348 aa13.13□□□□□ -0.31
GYPC-203ENST00000409836 FAM47BQ8NA70 645 aa13.13□□□□□ -0.31
GYPC-203ENST00000409836 METTL6Q8TCB7 284 aa13.13□□□□□ -0.31
GYPC-203ENST00000409836 MECRQ9BV79 373 aa13.13□□□□□ -0.31
GYPC-203ENST00000409836 SORBS1Q9BX66 1292 aaKnown RBP13.13□□□□□ -0.31
GYPC-203ENST00000409836 VIPAS39Q9H9C1 493 aa13.13□□□□□ -0.31
GYPC-203ENST00000409836 TMBIM4Q9HC24 238 aa13.13□□□□□ -0.31
GYPC-203ENST00000409836 ZNF160Q9HCG1 818 aa13.13□□□□□ -0.31
GYPC-203ENST00000409836 MMP25Q9NPA2 562 aa13.13□□□□□ -0.31
GYPC-203ENST00000409836 NECTIN3Q9NQS3 549 aa13.13□□□□□ -0.31
GYPC-203ENST00000409836 AHSPQ9NZD4 102 aa13.13□□□□□ -0.31
GYPC-203ENST00000409836 VPS29Q9UBQ0 182 aa13.13□□□□□ -0.31
GYPC-203ENST00000409836 G3BP2Q9UN86 482 aaKnown RBP13.13□□□□□ -0.31
GYPC-203ENST00000409836 ZNF451Q9Y4E5 1061 aa13.13□□□□□ -0.31
GYPC-203ENST00000409836 CCL27Q9Y4X3 112 aa13.13□□□□□ -0.31
GYPC-203ENST00000409836 SPACA6W5XKT8 324 aa13.13□□□□□ -0.31
GYPC-203ENST00000409836 FAM227AF5H4B4 570 aa13.12□□□□□ -0.31
GYPC-203ENST00000409836 SAP18O00422 153 aaKnown RBP13.12□□□□□ -0.31
GYPC-203ENST00000409836 CDK2AP1O14519 115 aa13.12□□□□□ -0.31
GYPC-203ENST00000409836 PROM1O43490 865 aa13.12□□□□□ -0.31
GYPC-203ENST00000409836 B4GALT2O60909 372 aa13.12□□□□□ -0.31
GYPC-203ENST00000409836 SNUPNO95149 360 aaKnown RBP13.12□□□□□ -0.31
GYPC-203ENST00000409836 UROSP10746 265 aa13.12□□□□□ -0.31
GYPC-203ENST00000409836 PPP2R1BP30154 601 aa13.12□□□□□ -0.31
GYPC-203ENST00000409836 ARRB2P32121 409 aa13.12□□□□□ -0.31
GYPC-203ENST00000409836 GSTM5P46439 218 aa13.12□□□□□ -0.31
GYPC-203ENST00000409836 BIKQ13323 160 aa13.12□□□□□ -0.31
GYPC-203ENST00000409836 MPP2Q14168 576 aa13.12□□□□□ -0.31
GYPC-203ENST00000409836 SPIN4Q56A73 249 aa13.12□□□□□ -0.31
GYPC-203ENST00000409836 SFT2D3Q587I9 215 aa13.12□□□□□ -0.31
GYPC-203ENST00000409836 MFSD4BQ5TF39 518 aa13.12□□□□□ -0.31
GYPC-203ENST00000409836 KANK2Q63ZY3 851 aa13.12□□□□□ -0.31
GYPC-203ENST00000409836 PAPD4Q6PIY7 484 aaKnown RBP13.12□□□□□ -0.31
GYPC-203ENST00000409836 GPR180Q86V85 440 aa13.12□□□□□ -0.31
GYPC-203ENST00000409836 NFAM1Q8NET5 270 aaPredicted RBP13.12□□□□□ -0.31
GYPC-203ENST00000409836 M1APQ8TC57 530 aa13.12□□□□□ -0.31
GYPC-203ENST00000409836 CHTF18Q8WVB6 975 aa13.12□□□□□ -0.31
GYPC-203ENST00000409836 KCNA7Q96RP8 456 aa13.12□□□□□ -0.31
GYPC-203ENST00000409836 LPAR4Q99677 370 aa13.12□□□□□ -0.31
GYPC-203ENST00000409836 MRPL1Q9BYD6 325 aaKnown RBP13.12□□□□□ -0.31
GYPC-203ENST00000409836 RNF32Q9H0A6 362 aa13.12□□□□□ -0.31
GYPC-203ENST00000409836 ADAP2Q9NPF8 381 aa13.12□□□□□ -0.31
GYPC-203ENST00000409836 PRTFDC1Q9NRG1 225 aa13.12□□□□□ -0.31
GYPC-203ENST00000409836 ARGLU1Q9NWB6 273 aaPredicted RBP13.12□□□□□ -0.31
GYPC-203ENST00000409836 HAO1Q9UJM8 370 aa13.12□□□□□ -0.31
GYPC-203ENST00000409836 RALYQ9UKM9 306 aaKnown RBP13.12□□□□□ -0.31
GYPC-203ENST00000409836 SLC12A4Q9UP95 1085 aa13.12□□□□□ -0.31
GYPC-203ENST00000409836 ATG4BQ9Y4P1 393 aa13.12□□□□□ -0.31
GYPC-203ENST00000409836 OR2W5A6NFC9 320 aa13.11□□□□□ -0.31
GYPC-203ENST00000409836 K7EM74 188 aa13.11□□□□□ -0.31
GYPC-203ENST00000409836 RSL1D1O76021 490 aaKnown RBP13.11□□□□□ -0.31
GYPC-203ENST00000409836 AIFM1O95831 613 aa13.11□□□□□ -0.31
GYPC-203ENST00000409836 FAM58BPP0C7Q3 252 aa13.11□□□□□ -0.31
GYPC-203ENST00000409836 ATXN8OSP0DMR3 200 aa13.11□□□□□ -0.31
GYPC-203ENST00000409836 NR2F6P10588 404 aa13.11□□□□□ -0.31
GYPC-203ENST00000409836 BUD31P41223 144 aaPredicted RBP13.11□□□□□ -0.31
GYPC-203ENST00000409836 CCL11P51671 97 aa13.11□□□□□ -0.31
GYPC-203ENST00000409836 SLC26A5P58743 744 aa13.11□□□□□ -0.31
GYPC-203ENST00000409836 TRA2BP62995 288 aaKnown RBP13.11□□□□□ -0.31
GYPC-203ENST00000409836 SLAMF1Q13291 335 aa13.11□□□□□ -0.31
GYPC-203ENST00000409836 SERTAD2Q14140 314 aa13.11□□□□□ -0.31
GYPC-203ENST00000409836 ELAVL1Q15717 326 aaKnown RBP13.11□□□□□ -0.31
GYPC-203ENST00000409836 CRB2Q5IJ48 1285 aa13.11□□□□□ -0.31
GYPC-203ENST00000409836 AGBL2Q5U5Z8 902 aa13.11□□□□□ -0.31
GYPC-203ENST00000409836 FAM219BQ5XKK7 198 aa13.11□□□□□ -0.31
GYPC-203ENST00000409836 FAAH2Q6GMR7 532 aa13.11□□□□□ -0.31
GYPC-203ENST00000409836 CUZD1Q86UP6 607 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms