RNA–Protein interactions for RNA: ENST00000409808.6

LIMS2-207, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene LIMS2, Length 2,315 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-207ENST00000409808 POFUT2Q9Y2G5 429 aa18.9■□□□□ 0.62
LIMS2-207ENST00000409808 TBC1D3DA0A087WVF3 549 aa18.9■□□□□ 0.62
LIMS2-207ENST00000409808 TBC1D3IA0A087WXS9 549 aa18.9■□□□□ 0.62
LIMS2-207ENST00000409808 TBC1D3EA0A087X179 549 aa18.9■□□□□ 0.62
LIMS2-207ENST00000409808 TBC1D3KA0A087X1G2 549 aa18.9■□□□□ 0.62
LIMS2-207ENST00000409808 TBC1D3FA6NER0 549 aaPredicted RBP18.9■□□□□ 0.62
LIMS2-207ENST00000409808 TBC1D3LB9A6J9 549 aa18.9■□□□□ 0.62
LIMS2-207ENST00000409808 PLRG1O43660 514 aaKnown RBP18.9■□□□□ 0.62
LIMS2-207ENST00000409808 TBC1D3HP0C7X1 549 aa18.9■□□□□ 0.62
LIMS2-207ENST00000409808 RRM2P31350 389 aa18.9■□□□□ 0.62
LIMS2-207ENST00000409808 ADPRHP54922 357 aa18.9■□□□□ 0.62
LIMS2-207ENST00000409808 CDC20Q12834 499 aa18.9■□□□□ 0.62
LIMS2-207ENST00000409808 ZNF404Q494X3 552 aa18.9■□□□□ 0.62
LIMS2-207ENST00000409808 C10orf62Q5T681 223 aaPredicted RBP18.9■□□□□ 0.62
LIMS2-207ENST00000409808 TBC1D3GQ6DHY5 549 aa18.9■□□□□ 0.62
LIMS2-207ENST00000409808 TBC1D3CQ6IPX1 549 aa18.9■□□□□ 0.62
LIMS2-207ENST00000409808 AGTRAPQ6RW13 159 aa18.9■□□□□ 0.62
LIMS2-207ENST00000409808 FAM83HQ6ZRV2 1179 aaPredicted RBP18.9■□□□□ 0.62
LIMS2-207ENST00000409808 NCCRP1Q6ZVX7 275 aaPredicted RBP18.9■□□□□ 0.62
LIMS2-207ENST00000409808 USP43Q70EL4 1123 aa18.9■□□□□ 0.62
LIMS2-207ENST00000409808 C11orf96Q7Z7L8 435 aa18.9■□□□□ 0.62
LIMS2-207ENST00000409808 TBC1D3Q8IZP1 549 aaPredicted RBP18.9■□□□□ 0.62
LIMS2-207ENST00000409808 RNF175Q8N4F7 328 aa18.9■□□□□ 0.62
LIMS2-207ENST00000409808 GOT1L1Q8NHS2 421 aaPredicted RBP18.9■□□□□ 0.62
LIMS2-207ENST00000409808 SIPA1Q96FS4 1042 aa18.9■□□□□ 0.62
LIMS2-207ENST00000409808 RHNO1Q9BSD3 238 aa18.9■□□□□ 0.62
LIMS2-207ENST00000409808 BHLHE41Q9C0J9 482 aaPredicted RBP18.9■□□□□ 0.62
LIMS2-207ENST00000409808 NDRG2Q9UN36 371 aaKnown RBP18.9■□□□□ 0.62
LIMS2-207ENST00000409808 BTBD3Q9Y2F9 522 aa18.9■□□□□ 0.62
LIMS2-207ENST00000409808 MGAT4DA6NG13 374 aa18.89■□□□□ 0.61
LIMS2-207ENST00000409808 CLCA1A8K7I4 914 aa18.89■□□□□ 0.61
LIMS2-207ENST00000409808 H3BM21 787 aa18.89■□□□□ 0.61
LIMS2-207ENST00000409808 AIREO43918 545 aa18.89■□□□□ 0.61
LIMS2-207ENST00000409808 RNGTTO60942 597 aaKnown RBP18.89■□□□□ 0.61
LIMS2-207ENST00000409808 ITGA2P17301 1181 aa18.89■□□□□ 0.61
LIMS2-207ENST00000409808 RAE1P78406 368 aaKnown RBP18.89■□□□□ 0.61
LIMS2-207ENST00000409808 DENND6BQ8NEG7 585 aa18.89■□□□□ 0.61
LIMS2-207ENST00000409808 CDC26Q8NHZ8 85 aa18.89■□□□□ 0.61
LIMS2-207ENST00000409808 UBE2FQ969M7 185 aa18.89■□□□□ 0.61
LIMS2-207ENST00000409808 CPNE5Q9HCH3 593 aa18.89■□□□□ 0.61
LIMS2-207ENST00000409808 SPASTQ9UBP0 616 aa18.89■□□□□ 0.61
LIMS2-207ENST00000409808 SLC23A2Q9UGH3 650 aa18.89■□□□□ 0.61
LIMS2-207ENST00000409808 ATP6V1HQ9UI12 483 aa18.89■□□□□ 0.61
LIMS2-207ENST00000409808 LYVE1Q9Y5Y7 322 aa18.89■□□□□ 0.61
LIMS2-207ENST00000409808 E7EQ34 232 aa18.89■□□□□ 0.61
LIMS2-207ENST00000409808 CATP04040 527 aaKnown RBP18.89■□□□□ 0.61
LIMS2-207ENST00000409808 CDK1P06493 297 aa18.89■□□□□ 0.61
LIMS2-207ENST00000409808 CTSKP43235 329 aa18.89■□□□□ 0.61
LIMS2-207ENST00000409808 EIF2B2P49770 351 aaKnown RBP18.89■□□□□ 0.61
LIMS2-207ENST00000409808 CRYBA2P53672 197 aa18.89■□□□□ 0.61
LIMS2-207ENST00000409808 CADM3Q8N126 398 aa18.89■□□□□ 0.61
LIMS2-207ENST00000409808 DNAJC22Q8N4W6 341 aa18.89■□□□□ 0.61
LIMS2-207ENST00000409808 C1orf52Q8N6N3 182 aaKnown RBP18.89■□□□□ 0.61
LIMS2-207ENST00000409808 LMNTD1Q8N9Z9 388 aa18.89■□□□□ 0.61
LIMS2-207ENST00000409808 TP53I13Q8NBR0 393 aaPredicted RBP18.89■□□□□ 0.61
LIMS2-207ENST00000409808 FLCNQ8NFG4 579 aa18.89■□□□□ 0.61
LIMS2-207ENST00000409808 FAM3CQ92520 227 aa18.89■□□□□ 0.61
LIMS2-207ENST00000409808 REPS1Q96D71 796 aa18.89■□□□□ 0.61
LIMS2-207ENST00000409808 MRGPRX1Q96LB2 322 aa18.89■□□□□ 0.61
LIMS2-207ENST00000409808 AQP9O43315 295 aa18.88■□□□□ 0.61
LIMS2-207ENST00000409808 VEGFDO43915 354 aa18.88■□□□□ 0.61
LIMS2-207ENST00000409808 TMED10P49755 219 aaKnown RBP18.88■□□□□ 0.61
LIMS2-207ENST00000409808 PPP2CBP62714 309 aa18.88■□□□□ 0.61
LIMS2-207ENST00000409808 RPS21P63220 83 aaKnown RBP18.88■□□□□ 0.61
LIMS2-207ENST00000409808 PPP2CAP67775 309 aa18.88■□□□□ 0.61
LIMS2-207ENST00000409808 MRPS21P82921 87 aaKnown RBP18.88■□□□□ 0.61
LIMS2-207ENST00000409808 SGCGQ13326 291 aa18.88■□□□□ 0.61
LIMS2-207ENST00000409808 DDX39BQ13838 428 aaKnown RBP18.88■□□□□ 0.61
LIMS2-207ENST00000409808 E2F2Q14209 437 aa18.88■□□□□ 0.61
LIMS2-207ENST00000409808 ZNF181Q2M3W8 571 aa18.88■□□□□ 0.61
LIMS2-207ENST00000409808 KIAA1324Q6UXG2 1013 aaKnown RBP18.88■□□□□ 0.61
LIMS2-207ENST00000409808 TRMT11Q7Z4G4 463 aaKnown RBP18.88■□□□□ 0.61
LIMS2-207ENST00000409808 AMER2Q8N7J2 671 aa18.88■□□□□ 0.61
LIMS2-207ENST00000409808 OR56A3Q8NH54 315 aa18.88■□□□□ 0.61
LIMS2-207ENST00000409808 CRELD1Q96HD1 420 aa18.88■□□□□ 0.61
LIMS2-207ENST00000409808 SLC17A9Q9BYT1 436 aa18.88■□□□□ 0.61
LIMS2-207ENST00000409808 NDUFAF4Q9P032 175 aa18.88■□□□□ 0.61
LIMS2-207ENST00000409808 STOX2Q9P2F5 926 aaPredicted RBP18.88■□□□□ 0.61
LIMS2-207ENST00000409808 ENOPH1Q9UHY7 261 aa18.88■□□□□ 0.61
LIMS2-207ENST00000409808 METTL15A6NJ78 407 aa18.88■□□□□ 0.61
LIMS2-207ENST00000409808 TMEM229AB2RXF0 380 aa18.88■□□□□ 0.61
LIMS2-207ENST00000409808 NUDT7P0C024 238 aa18.88■□□□□ 0.61
LIMS2-207ENST00000409808 TFF2Q03403 129 aa18.88■□□□□ 0.61
LIMS2-207ENST00000409808 NAE1Q13564 534 aa18.88■□□□□ 0.61
LIMS2-207ENST00000409808 IFI44LQ53G44 452 aa18.88■□□□□ 0.61
LIMS2-207ENST00000409808 GPR153Q6NV75 609 aa18.88■□□□□ 0.61
LIMS2-207ENST00000409808 NAGSQ8N159 534 aa18.88■□□□□ 0.61
LIMS2-207ENST00000409808 OR10G2Q8NGC3 310 aa18.88■□□□□ 0.61
LIMS2-207ENST00000409808 OR4A15Q8NGL6 344 aa18.88■□□□□ 0.61
LIMS2-207ENST00000409808 SPPL2AQ8TCT8 520 aa18.88■□□□□ 0.61
LIMS2-207ENST00000409808 RPL3LQ92901 407 aaKnown RBP18.88■□□□□ 0.61
LIMS2-207ENST00000409808 FEVQ99581 238 aa18.88■□□□□ 0.61
LIMS2-207ENST00000409808 C1QTNF2Q9BXJ5 285 aa18.88■□□□□ 0.61
LIMS2-207ENST00000409808 THSD1Q9NS62 852 aa18.88■□□□□ 0.61
LIMS2-207ENST00000409808 SLC31A1O15431 190 aa18.87■□□□□ 0.61
LIMS2-207ENST00000409808 UPK1BO75841 260 aa18.87■□□□□ 0.61
LIMS2-207ENST00000409808 NDUFV2P19404 249 aa18.87■□□□□ 0.61
LIMS2-207ENST00000409808 TIA1P31483 386 aaKnown RBP eCLIP18.87■□□□□ 0.61
LIMS2-207ENST00000409808 LIPAP38571 399 aa18.87■□□□□ 0.61
LIMS2-207ENST00000409808 RPL3P39023 403 aaKnown RBP18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms