RNA–Protein interactions for RNA: ENST00000409754.5

LIMS2-206, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 1 (best) BASIC

Gene LIMS2, Length 1,620 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-206ENST00000409754 SYNPO2LQ9H987 977 aa13.38□□□□□ -0.27
LIMS2-206ENST00000409754 TM9SF3Q9HD45 589 aa13.38□□□□□ -0.27
LIMS2-206ENST00000409754 TAS2R7Q9NYW3 318 aa13.38□□□□□ -0.27
LIMS2-206ENST00000409754 EHD3Q9NZN3 535 aa13.38□□□□□ -0.27
LIMS2-206ENST00000409754 SNRNP200O75643 2136 aaKnown RBP13.37□□□□□ -0.27
LIMS2-206ENST00000409754 A0A0G2JN53 185 aa13.37□□□□□ -0.27
LIMS2-206ENST00000409754 FAM149AA5PLN7 773 aa13.37□□□□□ -0.27
LIMS2-206ENST00000409754 C4orf51C9J302 202 aa13.37□□□□□ -0.27
LIMS2-206ENST00000409754 TLR4O00206 839 aa13.37□□□□□ -0.27
LIMS2-206ENST00000409754 PPM1DO15297 605 aa13.37□□□□□ -0.27
LIMS2-206ENST00000409754 DENRO43583 198 aaKnown RBP13.37□□□□□ -0.27
LIMS2-206ENST00000409754 GUCY1B2O75343 617 aa13.37□□□□□ -0.27
LIMS2-206ENST00000409754 KRT75O95678 551 aa13.37□□□□□ -0.27
LIMS2-206ENST00000409754 SERPINA1P01009 418 aa13.37□□□□□ -0.27
LIMS2-206ENST00000409754 STATHP02808 62 aa13.37□□□□□ -0.27
LIMS2-206ENST00000409754 FAM58BPP0C7Q3 252 aa13.37□□□□□ -0.27
LIMS2-206ENST00000409754 MAGP20916 626 aa13.37□□□□□ -0.27
LIMS2-206ENST00000409754 UQCRC2P22695 453 aa13.37□□□□□ -0.27
LIMS2-206ENST00000409754 ATP5A1P25705 553 aaKnown RBP13.37□□□□□ -0.27
LIMS2-206ENST00000409754 ALDH9A1P49189 494 aa13.37□□□□□ -0.27
LIMS2-206ENST00000409754 MVDP53602 400 aa13.37□□□□□ -0.27
LIMS2-206ENST00000409754 PCBP4P57723 403 aaKnown RBP13.37□□□□□ -0.27
LIMS2-206ENST00000409754 HHEXQ03014 270 aa13.37□□□□□ -0.27
LIMS2-206ENST00000409754 RGS1Q08116 209 aa13.37□□□□□ -0.27
LIMS2-206ENST00000409754 MED21Q13503 144 aa13.37□□□□□ -0.27
LIMS2-206ENST00000409754 ELOCQ15369 112 aa13.37□□□□□ -0.27
LIMS2-206ENST00000409754 TMTC4Q5T4D3 741 aa13.37□□□□□ -0.27
LIMS2-206ENST00000409754 FCRL6Q6DN72 434 aa13.37□□□□□ -0.27
LIMS2-206ENST00000409754 FBXO42Q6P3S6 717 aa13.37□□□□□ -0.27
LIMS2-206ENST00000409754 FIGLAQ6QHK4 219 aa13.37□□□□□ -0.27
LIMS2-206ENST00000409754 SPESP1Q6UW49 350 aa13.37□□□□□ -0.27
LIMS2-206ENST00000409754 FKBP9P1Q75LS8 142 aa13.37□□□□□ -0.27
LIMS2-206ENST00000409754 ACOT4Q8N9L9 421 aa13.37□□□□□ -0.27
LIMS2-206ENST00000409754 AVL9Q8NBF6 648 aa13.37□□□□□ -0.27
LIMS2-206ENST00000409754 FAM46DQ8NEK8 389 aa13.37□□□□□ -0.27
LIMS2-206ENST00000409754 GAL3ST3Q96A11 431 aa13.37□□□□□ -0.27
LIMS2-206ENST00000409754 SLC47A1Q96FL8 570 aa13.37□□□□□ -0.27
LIMS2-206ENST00000409754 SLC29A1Q99808 456 aa13.37□□□□□ -0.27
LIMS2-206ENST00000409754 MACROD1Q9BQ69 325 aa13.37□□□□□ -0.27
LIMS2-206ENST00000409754 BDH2Q9BUT1 245 aa13.37□□□□□ -0.27
LIMS2-206ENST00000409754 TEX10Q9NXF1 929 aaPredicted RBP13.37□□□□□ -0.27
LIMS2-206ENST00000409754 SAMD4AQ9UPU9 718 aaKnown RBP13.37□□□□□ -0.27
LIMS2-206ENST00000409754 NUP214P35658 2090 aaPredicted RBP13.36□□□□□ -0.27
LIMS2-206ENST00000409754 CLOCKO15516 846 aa13.36□□□□□ -0.27
LIMS2-206ENST00000409754 DEAF1O75398 565 aaPredicted RBP13.36□□□□□ -0.27
LIMS2-206ENST00000409754 PRKD3O94806 890 aa13.36□□□□□ -0.27
LIMS2-206ENST00000409754 NTRK1P04629 796 aa13.36□□□□□ -0.27
LIMS2-206ENST00000409754 CKMT2P17540 419 aa13.36□□□□□ -0.27
LIMS2-206ENST00000409754 PCGF2P35227 344 aa13.36□□□□□ -0.27
LIMS2-206ENST00000409754 SPEM2Q0P670 501 aa13.36□□□□□ -0.27
LIMS2-206ENST00000409754 FADDQ13158 208 aa13.36□□□□□ -0.27
LIMS2-206ENST00000409754 SLAMF1Q13291 335 aa13.36□□□□□ -0.27
LIMS2-206ENST00000409754 SF3A2Q15428 464 aaKnown RBP13.36□□□□□ -0.27
LIMS2-206ENST00000409754 NKG7Q16617 165 aa13.36□□□□□ -0.27
LIMS2-206ENST00000409754 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.36□□□□□ -0.27
LIMS2-206ENST00000409754 NDUFAF5Q5TEU4 345 aa13.36□□□□□ -0.27
LIMS2-206ENST00000409754 SPRED1Q7Z699 444 aa13.36□□□□□ -0.27
LIMS2-206ENST00000409754 GKN2Q86XP6 184 aa13.36□□□□□ -0.27
LIMS2-206ENST00000409754 EPHX4Q8IUS5 362 aa13.36□□□□□ -0.27
LIMS2-206ENST00000409754 SFTPA2Q8IWL1 248 aa13.36□□□□□ -0.27
LIMS2-206ENST00000409754 CLEC4FQ8N1N0 589 aa13.36□□□□□ -0.27
LIMS2-206ENST00000409754 FAM86B1Q8N7N1 296 aa13.36□□□□□ -0.27
LIMS2-206ENST00000409754 OR8K5Q8NH50 307 aa13.36□□□□□ -0.27
LIMS2-206ENST00000409754 TM4SF19Q96DZ7 209 aa13.36□□□□□ -0.27
LIMS2-206ENST00000409754 PYURFQ96I23 114 aa13.36□□□□□ -0.27
LIMS2-206ENST00000409754 OR2A5Q96R48 311 aa13.36□□□□□ -0.27
LIMS2-206ENST00000409754 DPH2Q9BQC3 489 aaPredicted RBP13.36□□□□□ -0.27
LIMS2-206ENST00000409754 ABCG4Q9H172 646 aa13.36□□□□□ -0.27
LIMS2-206ENST00000409754 CAPN10Q9HC96 672 aa13.36□□□□□ -0.27
LIMS2-206ENST00000409754 NEUROD4Q9HD90 331 aa13.36□□□□□ -0.27
LIMS2-206ENST00000409754 SLAMF7Q9NQ25 335 aa13.36□□□□□ -0.27
LIMS2-206ENST00000409754 ACSS1Q9NUB1 689 aaPredicted RBP13.36□□□□□ -0.27
LIMS2-206ENST00000409754 GPATCH2Q9NW75 528 aa13.36□□□□□ -0.27
LIMS2-206ENST00000409754 HRASLS2Q9NWW9 162 aa13.36□□□□□ -0.27
LIMS2-206ENST00000409754 PILRAQ9UKJ1 303 aa13.36□□□□□ -0.27
LIMS2-206ENST00000409754 ASB4Q9Y574 426 aa13.36□□□□□ -0.27
LIMS2-206ENST00000409754 PCDHGA5Q9Y5G8 931 aa13.36□□□□□ -0.27
LIMS2-206ENST00000409754 A0A0J9YY10 115 aa13.35□□□□□ -0.27
LIMS2-206ENST00000409754 SAC3D1A6NKF1 404 aa13.35□□□□□ -0.27
LIMS2-206ENST00000409754 TNFRSF21O75509 655 aa13.35□□□□□ -0.27
LIMS2-206ENST00000409754 PRSS23O95084 383 aa13.35□□□□□ -0.27
LIMS2-206ENST00000409754 SLC35G6P0C7Q6 338 aa13.35□□□□□ -0.27
LIMS2-206ENST00000409754 KDELR2P33947 212 aa13.35□□□□□ -0.27
LIMS2-206ENST00000409754 CHI3L1P36222 383 aaPredicted RBP13.35□□□□□ -0.27
LIMS2-206ENST00000409754 MANFP55145 182 aaKnown RBP13.35□□□□□ -0.27
LIMS2-206ENST00000409754 VAC14Q08AM6 782 aa13.35□□□□□ -0.27
LIMS2-206ENST00000409754 RBBP4Q09028 425 aa13.35□□□□□ -0.27
LIMS2-206ENST00000409754 MLC1Q15049 377 aa13.35□□□□□ -0.27
LIMS2-206ENST00000409754 TEAD4Q15561 434 aa13.35□□□□□ -0.27
LIMS2-206ENST00000409754 OOSP2Q86WS3 158 aa13.35□□□□□ -0.27
LIMS2-206ENST00000409754 C11orf65Q8NCR3 313 aa13.35□□□□□ -0.27
LIMS2-206ENST00000409754 BAHD1Q8TBE0 780 aaPredicted RBP13.35□□□□□ -0.27
LIMS2-206ENST00000409754 GATA6Q92908 595 aa13.35□□□□□ -0.27
LIMS2-206ENST00000409754 ZBED6CLQ96FA7 236 aaPredicted RBP13.35□□□□□ -0.27
LIMS2-206ENST00000409754 NLNQ9BYT8 704 aa13.35□□□□□ -0.27
LIMS2-206ENST00000409754 MIR1-1HGQ9H1L0 117 aa13.35□□□□□ -0.27
LIMS2-206ENST00000409754 EPS8L2Q9H6S3 715 aa13.35□□□□□ -0.27
LIMS2-206ENST00000409754 LYARQ9NX58 379 aaKnown RBP13.35□□□□□ -0.27
LIMS2-206ENST00000409754 ZNF639Q9UID6 485 aa13.35□□□□□ -0.27
LIMS2-206ENST00000409754 RPS6KA6Q9UK32 745 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms