RNA–Protein interactions for RNA: ENST00000409141.5

PDLIM2-206, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 1,463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-206ENST00000409141 IQCKQ8N0W5 287 aa16.8■□□□□ 0.28
PDLIM2-206ENST00000409141 ZCCHC7Q8N3Z6 543 aaKnown RBP16.8■□□□□ 0.28
PDLIM2-206ENST00000409141 EFCAB3Q8N7B9 438 aa16.8■□□□□ 0.28
PDLIM2-206ENST00000409141 CCNYL1Q8N7R7 359 aa16.8■□□□□ 0.28
PDLIM2-206ENST00000409141 CPT1CQ8TCG5 803 aa16.8■□□□□ 0.28
PDLIM2-206ENST00000409141 C12orf65Q9H3J6 166 aaKnown RBP16.8■□□□□ 0.28
PDLIM2-206ENST00000409141 MS4A12Q9NXJ0 267 aa16.8■□□□□ 0.28
PDLIM2-206ENST00000409141 ZNF225Q9UK10 706 aa16.8■□□□□ 0.28
PDLIM2-206ENST00000409141 BLACEA4D250 179 aa16.8■□□□□ 0.28
PDLIM2-206ENST00000409141 SAGE2PA6NJ88 616 aa16.8■□□□□ 0.28
PDLIM2-206ENST00000409141 TGFBR3LH3BV60 316 aa16.8■□□□□ 0.28
PDLIM2-206ENST00000409141 MLYCDO95822 493 aa16.8■□□□□ 0.28
PDLIM2-206ENST00000409141 BSGP35613 385 aa16.8■□□□□ 0.28
PDLIM2-206ENST00000409141 SLC18A2Q05940 514 aa16.8■□□□□ 0.28
PDLIM2-206ENST00000409141 INPP5JQ15735 1006 aaPredicted RBP16.8■□□□□ 0.28
PDLIM2-206ENST00000409141 FCRLBQ6BAA4 426 aa16.8■□□□□ 0.28
PDLIM2-206ENST00000409141 H3F3CQ6NXT2 135 aa16.8■□□□□ 0.28
PDLIM2-206ENST00000409141 CYP20A1Q6UW02 462 aa16.8■□□□□ 0.28
PDLIM2-206ENST00000409141 GPRIN3Q6ZVF9 776 aa16.8■□□□□ 0.28
PDLIM2-206ENST00000409141 GPR180Q86V85 440 aa16.8■□□□□ 0.28
PDLIM2-206ENST00000409141 MREGQ8N565 214 aa16.8■□□□□ 0.28
PDLIM2-206ENST00000409141 CDYL2Q8N8U2 506 aa16.8■□□□□ 0.28
PDLIM2-206ENST00000409141 CATSPER1Q8NEC5 780 aa16.8■□□□□ 0.28
PDLIM2-206ENST00000409141 SELENOMQ8WWX9 145 aa16.8■□□□□ 0.28
PDLIM2-206ENST00000409141 HAS2Q92819 552 aa16.8■□□□□ 0.28
PDLIM2-206ENST00000409141 ZNF354BQ96LW1 612 aa16.8■□□□□ 0.28
PDLIM2-206ENST00000409141 ZNF382Q96SR6 550 aa16.8■□□□□ 0.28
PDLIM2-206ENST00000409141 ZNF717Q9BY31 904 aaPredicted RBP16.8■□□□□ 0.28
PDLIM2-206ENST00000409141 ALOXE3Q9BYJ1 711 aa16.8■□□□□ 0.28
PDLIM2-206ENST00000409141 DDX31Q9H8H2 851 aaKnown RBP16.8■□□□□ 0.28
PDLIM2-206ENST00000409141 FARSBQ9NSD9 589 aaKnown RBP16.8■□□□□ 0.28
PDLIM2-206ENST00000409141 MAP10Q9P2G4 905 aa16.8■□□□□ 0.28
PDLIM2-206ENST00000409141 LGALS13Q9UHV8 139 aa16.8■□□□□ 0.28
PDLIM2-206ENST00000409141 RAB21Q9UL25 225 aa16.8■□□□□ 0.28
PDLIM2-206ENST00000409141 PLAAQ9Y263 795 aa16.8■□□□□ 0.28
PDLIM2-206ENST00000409141 STK38LQ9Y2H1 464 aa16.8■□□□□ 0.28
PDLIM2-206ENST00000409141 BAHCC1Q9P281 2608 aa16.79■□□□□ 0.28
PDLIM2-206ENST00000409141 MYOCOSA0A1B0GUC4 107 aa16.79■□□□□ 0.28
PDLIM2-206ENST00000409141 LDB3O75112 727 aa16.79■□□□□ 0.28
PDLIM2-206ENST00000409141 EEDO75530 441 aaKnown RBP16.79■□□□□ 0.28
PDLIM2-206ENST00000409141 MYO1DO94832 1006 aa16.79■□□□□ 0.28
PDLIM2-206ENST00000409141 PDYNP01213 254 aa16.79■□□□□ 0.28
PDLIM2-206ENST00000409141 IFNA16P05015 189 aa16.79■□□□□ 0.28
PDLIM2-206ENST00000409141 TUBBP07437 444 aa16.79■□□□□ 0.28
PDLIM2-206ENST00000409141 CPA3P15088 417 aa16.79■□□□□ 0.28
PDLIM2-206ENST00000409141 PPP2R1BP30154 601 aa16.79■□□□□ 0.28
PDLIM2-206ENST00000409141 TLX1P31314 330 aaPredicted RBP16.79■□□□□ 0.28
PDLIM2-206ENST00000409141 TAS2R50P59544 299 aa16.79■□□□□ 0.28
PDLIM2-206ENST00000409141 FOXK1P85037 733 aa16.79■□□□□ 0.28
PDLIM2-206ENST00000409141 LCP2Q13094 533 aa16.79■□□□□ 0.28
PDLIM2-206ENST00000409141 TLR1Q15399 786 aa16.79■□□□□ 0.28
PDLIM2-206ENST00000409141 CUZD1Q86UP6 607 aa16.79■□□□□ 0.28
PDLIM2-206ENST00000409141 TRABD2AQ86V40 505 aa16.79■□□□□ 0.28
PDLIM2-206ENST00000409141 NUDT13Q86X67 352 aa16.79■□□□□ 0.28
PDLIM2-206ENST00000409141 NFAM1Q8NET5 270 aaPredicted RBP16.79■□□□□ 0.28
PDLIM2-206ENST00000409141 RDH11Q8TC12 318 aa16.79■□□□□ 0.28
PDLIM2-206ENST00000409141 ELP5Q8TE02 316 aa16.79■□□□□ 0.28
PDLIM2-206ENST00000409141 IQCGQ9H095 443 aaKnown RBP16.79■□□□□ 0.28
PDLIM2-206ENST00000409141 LYARQ9NX58 379 aaKnown RBP16.79■□□□□ 0.28
PDLIM2-206ENST00000409141 AHSPQ9NZD4 102 aa16.79■□□□□ 0.28
PDLIM2-206ENST00000409141 PHF11Q9UIL8 331 aa16.79■□□□□ 0.28
PDLIM2-206ENST00000409141 CLDN16Q9Y5I7 305 aa16.79■□□□□ 0.28
PDLIM2-206ENST00000409141 SYNDIG1LA6NDD5 238 aa16.78■□□□□ 0.28
PDLIM2-206ENST00000409141 SEMA3DO95025 777 aa16.78■□□□□ 0.28
PDLIM2-206ENST00000409141 WDPCPO95876 746 aa16.78■□□□□ 0.28
PDLIM2-206ENST00000409141 F10P00742 488 aa16.78■□□□□ 0.28
PDLIM2-206ENST00000409141 KRT6AP02538 564 aa16.78■□□□□ 0.28
PDLIM2-206ENST00000409141 KRT6BP04259 564 aa16.78■□□□□ 0.28
PDLIM2-206ENST00000409141 FAM58BPP0C7Q3 252 aa16.78■□□□□ 0.28
PDLIM2-206ENST00000409141 KRT6CP48668 564 aa16.78■□□□□ 0.28
PDLIM2-206ENST00000409141 PKNOX1P55347 436 aa16.78■□□□□ 0.28
PDLIM2-206ENST00000409141 HNRNPH2P55795 449 aaKnown RBP16.78■□□□□ 0.28
PDLIM2-206ENST00000409141 KCNC4Q03721 635 aa16.78■□□□□ 0.28
PDLIM2-206ENST00000409141 ZNF169Q14929 603 aaPredicted RBP16.78■□□□□ 0.28
PDLIM2-206ENST00000409141 MEP1AQ16819 746 aa16.78■□□□□ 0.28
PDLIM2-206ENST00000409141 ACER2Q5QJU3 275 aa16.78■□□□□ 0.28
PDLIM2-206ENST00000409141 SRRM1Q8IYB3 904 aaKnown RBP16.78■□□□□ 0.28
PDLIM2-206ENST00000409141 KIF2BQ8N4N8 673 aa16.78■□□□□ 0.28
PDLIM2-206ENST00000409141 CISD2Q8N5K1 135 aaKnown RBP16.78■□□□□ 0.28
PDLIM2-206ENST00000409141 SLC5A8Q8N695 610 aa16.78■□□□□ 0.28
PDLIM2-206ENST00000409141 OR1N1Q8NGS0 311 aa16.78■□□□□ 0.28
PDLIM2-206ENST00000409141 METTL6Q8TCB7 284 aa16.78■□□□□ 0.28
PDLIM2-206ENST00000409141 MIB2Q96AX9 1013 aa16.78■□□□□ 0.28
PDLIM2-206ENST00000409141 MRPL1Q9BYD6 325 aaKnown RBP16.78■□□□□ 0.28
PDLIM2-206ENST00000409141 SLC29A3Q9BZD2 475 aa16.78■□□□□ 0.28
PDLIM2-206ENST00000409141 GSTO2Q9H4Y5 243 aa16.78■□□□□ 0.28
PDLIM2-206ENST00000409141 RPF2Q9H7B2 306 aaKnown RBP16.78■□□□□ 0.28
PDLIM2-206ENST00000409141 SLC12A4Q9UP95 1085 aa16.78■□□□□ 0.28
PDLIM2-206ENST00000409141 ATG4BQ9Y4P1 393 aa16.78■□□□□ 0.28
PDLIM2-206ENST00000409141 MYO18BQ8IUG5 2567 aa16.78■□□□□ 0.28
PDLIM2-206ENST00000409141 RP1L1Q8IWN7 2480 aaPredicted RBP16.77■□□□□ 0.28
PDLIM2-206ENST00000409141 A0A0A6YYD5 115 aa16.77■□□□□ 0.28
PDLIM2-206ENST00000409141 MANBAO00462 879 aa16.77■□□□□ 0.28
PDLIM2-206ENST00000409141 PROM1O43490 865 aa16.77■□□□□ 0.28
PDLIM2-206ENST00000409141 TMPRSS11DO60235 418 aa16.77■□□□□ 0.28
PDLIM2-206ENST00000409141 GBAP04062 536 aa16.77■□□□□ 0.28
PDLIM2-206ENST00000409141 TNNI3P19429 210 aa16.77■□□□□ 0.28
PDLIM2-206ENST00000409141 HMOX2P30519 316 aa16.77■□□□□ 0.28
PDLIM2-206ENST00000409141 BUD31P41223 144 aaPredicted RBP16.77■□□□□ 0.28
PDLIM2-206ENST00000409141 NAGLUP54802 743 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms