RNA–Protein interactions for RNA: ENST00000409101.7

SCN3A-203, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SCN3A, Length 6,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-203ENST00000409101 TMEM138Q9NPI0 162 aa4.81□□□□□ -1.64
SCN3A-203ENST00000409101 THSD1Q9NS62 852 aa4.81□□□□□ -1.64
SCN3A-203ENST00000409101 ANKMY1Q9P2S6 941 aa4.81□□□□□ -1.64
SCN3A-203ENST00000409101 TMEM221A6NGB7 291 aa4.81□□□□□ -1.64
SCN3A-203ENST00000409101 IQCJ-SCHIP1C9J366 451 aaPredicted RBP4.81□□□□□ -1.64
SCN3A-203ENST00000409101 M0R296 226 aa4.81□□□□□ -1.64
SCN3A-203ENST00000409101 TOR1BO14657 336 aa4.81□□□□□ -1.64
SCN3A-203ENST00000409101 DBIP07108 87 aaKnown RBP4.81□□□□□ -1.64
SCN3A-203ENST00000409101 CD1DP15813 335 aa4.81□□□□□ -1.64
SCN3A-203ENST00000409101 RPS3P23396 243 aaKnown RBP eCLIP4.81□□□□□ -1.64
SCN3A-203ENST00000409101 IL4RP24394 825 aa4.81□□□□□ -1.64
SCN3A-203ENST00000409101 HLA-FP30511 346 aa4.81□□□□□ -1.64
SCN3A-203ENST00000409101 TGFBR2P37173 567 aa4.81□□□□□ -1.64
SCN3A-203ENST00000409101 RNF144AP50876 292 aaPredicted RBP4.81□□□□□ -1.64
SCN3A-203ENST00000409101 DGKQP52824 942 aa4.81□□□□□ -1.64
SCN3A-203ENST00000409101 DCDP81605 110 aaKnown RBP4.81□□□□□ -1.64
SCN3A-203ENST00000409101 KLHL22Q53GT1 634 aa4.81□□□□□ -1.64
SCN3A-203ENST00000409101 HMBOX1Q6NT76 420 aa4.81□□□□□ -1.64
SCN3A-203ENST00000409101 KLHL17Q6TDP4 642 aa4.81□□□□□ -1.64
SCN3A-203ENST00000409101 SHISA6Q6ZSJ9 500 aa4.81□□□□□ -1.64
SCN3A-203ENST00000409101 Q7L0L9 218 aa4.81□□□□□ -1.64
SCN3A-203ENST00000409101 SPEM1Q8N4L4 309 aa4.81□□□□□ -1.64
SCN3A-203ENST00000409101 ZNF283Q8N7M2 679 aa4.81□□□□□ -1.64
SCN3A-203ENST00000409101 BOLLQ8N9W6 283 aaKnown RBP4.81□□□□□ -1.64
SCN3A-203ENST00000409101 CLPTM1LQ96KA5 538 aa4.81□□□□□ -1.64
SCN3A-203ENST00000409101 SLC39A3Q9BRY0 314 aa4.81□□□□□ -1.64
SCN3A-203ENST00000409101 CLEC4MQ9H2X3 399 aaPredicted RBP4.81□□□□□ -1.64
SCN3A-203ENST00000409101 NGBQ9NPG2 151 aa4.81□□□□□ -1.64
SCN3A-203ENST00000409101 MCUBQ9NWR8 336 aa4.81□□□□□ -1.64
SCN3A-203ENST00000409101 NXT1Q9UKK6 140 aaKnown RBP4.81□□□□□ -1.64
SCN3A-203ENST00000409101 SLX4Q8IY92 1834 aa4.81□□□□□ -1.64
SCN3A-203ENST00000409101 A0A0A6YYC8 382 aaPredicted RBP4.81□□□□□ -1.64
SCN3A-203ENST00000409101 A0A1B0GVI7 797 aa4.81□□□□□ -1.64
SCN3A-203ENST00000409101 C11orf98E9PRG8 122 aa4.81□□□□□ -1.64
SCN3A-203ENST00000409101 I3L1I5 382 aaPredicted RBP4.81□□□□□ -1.64
SCN3A-203ENST00000409101 AREL1O15033 823 aa4.81□□□□□ -1.64
SCN3A-203ENST00000409101 RAB36O95755 333 aa4.81□□□□□ -1.64
SCN3A-203ENST00000409101 FADS2O95864 444 aaKnown RBP4.81□□□□□ -1.64
SCN3A-203ENST00000409101 BMP4P12644 408 aa4.81□□□□□ -1.64
SCN3A-203ENST00000409101 GSTM2P28161 218 aa4.81□□□□□ -1.64
SCN3A-203ENST00000409101 TIA1P31483 386 aaKnown RBP eCLIP4.81□□□□□ -1.64
SCN3A-203ENST00000409101 TPMTP51580 245 aa4.81□□□□□ -1.64
SCN3A-203ENST00000409101 CLEC12AQ5QGZ9 265 aa4.81□□□□□ -1.64
SCN3A-203ENST00000409101 ZNF678Q5SXM1 525 aa4.81□□□□□ -1.64
SCN3A-203ENST00000409101 LCTLQ6UWM7 567 aa4.81□□□□□ -1.64
SCN3A-203ENST00000409101 OR4N5Q8IXE1 308 aa4.81□□□□□ -1.64
SCN3A-203ENST00000409101 THEM6Q8WUY1 208 aa4.81□□□□□ -1.64
SCN3A-203ENST00000409101 C1GALT1C1Q96EU7 318 aa4.81□□□□□ -1.64
SCN3A-203ENST00000409101 SLC6A17Q9H1V8 727 aa4.81□□□□□ -1.64
SCN3A-203ENST00000409101 OR51I1Q9H343 314 aa4.81□□□□□ -1.64
SCN3A-203ENST00000409101 SLCO1B3Q9NPD5 702 aa4.81□□□□□ -1.64
SCN3A-203ENST00000409101 SESN1Q9Y6P5 492 aa4.81□□□□□ -1.64
SCN3A-203ENST00000409101 WASH4PA8MWX3 477 aa4.8□□□□□ -1.64
SCN3A-203ENST00000409101 CXorf49A8MYA2 514 aaPredicted RBP4.8□□□□□ -1.64
SCN3A-203ENST00000409101 FAM25EA8MYX2 175 aa4.8□□□□□ -1.64
SCN3A-203ENST00000409101 RDH16O75452 317 aa4.8□□□□□ -1.64
SCN3A-203ENST00000409101 OR12D1P0DN82 309 aa4.8□□□□□ -1.64
SCN3A-203ENST00000409101 ENTPD1P49961 510 aa4.8□□□□□ -1.64
SCN3A-203ENST00000409101 AGTR2P50052 363 aa4.8□□□□□ -1.64
SCN3A-203ENST00000409101 NR0B1P51843 470 aaKnown RBP4.8□□□□□ -1.64
SCN3A-203ENST00000409101 CLDN10P78369 228 aa4.8□□□□□ -1.64
SCN3A-203ENST00000409101 HYAL1Q12794 435 aa4.8□□□□□ -1.64
SCN3A-203ENST00000409101 DSG2Q14126 1118 aa4.8□□□□□ -1.64
SCN3A-203ENST00000409101 ZNF77Q15935 545 aa4.8□□□□□ -1.64
SCN3A-203ENST00000409101 EXOC3L2Q2M3D2 409 aa4.8□□□□□ -1.64
SCN3A-203ENST00000409101 SLC36A3Q495N2 470 aa4.8□□□□□ -1.64
SCN3A-203ENST00000409101 CRB2Q5IJ48 1285 aa4.8□□□□□ -1.64
SCN3A-203ENST00000409101 TMEM53Q6P2H8 277 aa4.8□□□□□ -1.64
SCN3A-203ENST00000409101 ZNF765Q7L2R6 523 aa4.8□□□□□ -1.64
SCN3A-203ENST00000409101 GALNTL5Q7Z4T8 443 aa4.8□□□□□ -1.64
SCN3A-203ENST00000409101 RTN4RL1Q86UN2 441 aaPredicted RBP4.8□□□□□ -1.64
SCN3A-203ENST00000409101 CLVS1Q8IUQ0 354 aaPredicted RBP4.8□□□□□ -1.64
SCN3A-203ENST00000409101 SFRP1Q8N474 314 aa4.8□□□□□ -1.64
SCN3A-203ENST00000409101 FANK1Q8TC84 345 aa4.8□□□□□ -1.64
SCN3A-203ENST00000409101 GNPDA2Q8TDQ7 276 aa4.8□□□□□ -1.64
SCN3A-203ENST00000409101 SEC14L1Q92503 715 aa4.8□□□□□ -1.64
SCN3A-203ENST00000409101 NINJ1Q92982 152 aa4.8□□□□□ -1.64
SCN3A-203ENST00000409101 UCN3Q969E3 161 aa4.8□□□□□ -1.64
SCN3A-203ENST00000409101 LRCH3Q96II8 777 aa4.8□□□□□ -1.64
SCN3A-203ENST00000409101 OSBPL11Q9BXB4 747 aa4.8□□□□□ -1.64
SCN3A-203ENST00000409101 POLR2J3Q9H1A7 115 aaKnown RBP4.8□□□□□ -1.64
SCN3A-203ENST00000409101 CSNK1G1Q9HCP0 422 aa4.8□□□□□ -1.64
SCN3A-203ENST00000409101 MRPS2Q9Y399 296 aaKnown RBP4.8□□□□□ -1.64
SCN3A-203ENST00000409101 C9P02748 559 aa4.8□□□□□ -1.64
SCN3A-203ENST00000409101 CHRM5P08912 532 aaPredicted RBP4.8□□□□□ -1.64
SCN3A-203ENST00000409101 EDNRAP25101 427 aa4.8□□□□□ -1.64
SCN3A-203ENST00000409101 GPR143P51810 404 aa4.8□□□□□ -1.64
SCN3A-203ENST00000409101 GSCP56915 257 aaPredicted RBP4.8□□□□□ -1.64
SCN3A-203ENST00000409101 SPEM2Q0P670 501 aa4.8□□□□□ -1.64
SCN3A-203ENST00000409101 RPE65Q16518 533 aa4.8□□□□□ -1.64
SCN3A-203ENST00000409101 RAB41Q5JT25 222 aa4.8□□□□□ -1.64
SCN3A-203ENST00000409101 FAM182AQ5T1J6 154 aa4.8□□□□□ -1.64
SCN3A-203ENST00000409101 C6orf120Q7Z4R8 191 aa4.8□□□□□ -1.64
SCN3A-203ENST00000409101 GALNT15Q8N3T1 639 aa4.8□□□□□ -1.64
SCN3A-203ENST00000409101 ZNF676Q8N7Q3 588 aa4.8□□□□□ -1.64
SCN3A-203ENST00000409101 C19orf47Q8N9M1 422 aaKnown RBP4.8□□□□□ -1.64
SCN3A-203ENST00000409101 ZFPM2Q8WW38 1151 aa4.8□□□□□ -1.64
SCN3A-203ENST00000409101 CRYGNQ8WXF5 182 aa4.8□□□□□ -1.64
SCN3A-203ENST00000409101 SHISA4Q96DD7 197 aa4.8□□□□□ -1.64
SCN3A-203ENST00000409101 ARL5BQ96KC2 179 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms