RNA–Protein interactions for RNA: ENST00000406938.2

CHKB-201, Transcript of choline kinase beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHKB, Length 1,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-201ENST00000406938 ZNF385BQ569K4 471 aa19.34■□□□□ 0.69
CHKB-201ENST00000406938 CPTPQ5TA50 214 aa19.34■□□□□ 0.69
CHKB-201ENST00000406938 REP15Q6BDI9 236 aa19.34■□□□□ 0.69
CHKB-201ENST00000406938 RHBDD2Q6NTF9 364 aa19.34■□□□□ 0.69
CHKB-201ENST00000406938 RAB11FIP2Q7L804 512 aa19.34■□□□□ 0.69
CHKB-201ENST00000406938 FAM47BQ8NA70 645 aa19.34■□□□□ 0.69
CHKB-201ENST00000406938 UCN3Q969E3 161 aa19.34■□□□□ 0.69
CHKB-201ENST00000406938 RCN3Q96D15 328 aa19.34■□□□□ 0.69
CHKB-201ENST00000406938 TUBB6Q9BUF5 446 aa19.34■□□□□ 0.69
CHKB-201ENST00000406938 SLC7A5P2Q9GIP4 190 aa19.34■□□□□ 0.69
CHKB-201ENST00000406938 MS4A12Q9NXJ0 267 aa19.34■□□□□ 0.69
CHKB-201ENST00000406938 SH3BP4Q9P0V3 963 aa19.34■□□□□ 0.69
CHKB-201ENST00000406938 C5AR2Q9P296 337 aa19.34■□□□□ 0.69
CHKB-201ENST00000406938 CDV3Q9UKY7 258 aaKnown RBP19.34■□□□□ 0.69
CHKB-201ENST00000406938 PCDHA9Q9Y5H5 950 aa19.34■□□□□ 0.69
CHKB-201ENST00000406938 MAU2Q9Y6X3 613 aa19.34■□□□□ 0.69
CHKB-201ENST00000406938 C1orf226A1L170 272 aa19.33■□□□□ 0.69
CHKB-201ENST00000406938 GLOD5A6NK44 160 aa19.33■□□□□ 0.69
CHKB-201ENST00000406938 BBIP1A8MTZ0 92 aa19.33■□□□□ 0.69
CHKB-201ENST00000406938 CFLARO15519 480 aa19.33■□□□□ 0.69
CHKB-201ENST00000406938 CHST10O43529 356 aa19.33■□□□□ 0.69
CHKB-201ENST00000406938 KIAA0754O94854 1291 aa19.33■□□□□ 0.69
CHKB-201ENST00000406938 PHC1P78364 1004 aa19.33■□□□□ 0.69
CHKB-201ENST00000406938 SRSF11Q05519 484 aaKnown RBP19.33■□□□□ 0.69
CHKB-201ENST00000406938 STX5Q13190 355 aa19.33■□□□□ 0.69
CHKB-201ENST00000406938 MMEL1Q495T6 779 aa19.33■□□□□ 0.69
CHKB-201ENST00000406938 LARP7Q4G0J3 582 aaKnown RBP eCLIP19.33■□□□□ 0.69
CHKB-201ENST00000406938 C1orf189Q5VU69 101 aa19.33■□□□□ 0.69
CHKB-201ENST00000406938 OR4F3Q6IEY1 312 aa19.33■□□□□ 0.69
CHKB-201ENST00000406938 RETREG3Q86VR2 466 aa19.33■□□□□ 0.69
CHKB-201ENST00000406938 OR8J2Q8NGG1 315 aa19.33■□□□□ 0.69
CHKB-201ENST00000406938 PMEPA1Q969W9 287 aa19.33■□□□□ 0.69
CHKB-201ENST00000406938 NPAS2Q99743 824 aa19.33■□□□□ 0.69
CHKB-201ENST00000406938 SLC39A1Q9NY26 324 aa19.33■□□□□ 0.69
CHKB-201ENST00000406938 NDUFAF1Q9Y375 327 aa19.33■□□□□ 0.69
CHKB-201ENST00000406938 PCDHB3Q9Y5E6 796 aa19.33■□□□□ 0.69
CHKB-201ENST00000406938 SPACA6W5XKT8 324 aa19.33■□□□□ 0.69
CHKB-201ENST00000406938 PMS2P1A4D2B8 440 aa19.33■□□□□ 0.68
CHKB-201ENST00000406938 ATXN8OSP0DMR3 200 aa19.33■□□□□ 0.68
CHKB-201ENST00000406938 ITGAXP20702 1163 aa19.33■□□□□ 0.68
CHKB-201ENST00000406938 OR1D4P47884 311 aa19.33■□□□□ 0.68
CHKB-201ENST00000406938 RAB38P57729 211 aa19.33■□□□□ 0.68
CHKB-201ENST00000406938 SYT16Q17RD7 645 aa19.33■□□□□ 0.68
CHKB-201ENST00000406938 PRSS53Q2L4Q9 553 aa19.33■□□□□ 0.68
CHKB-201ENST00000406938 PRMT9Q6P2P2 845 aa19.33■□□□□ 0.68
CHKB-201ENST00000406938 YTHDF3Q7Z739 585 aaKnown RBP19.33■□□□□ 0.68
CHKB-201ENST00000406938 SLC38A9Q8NBW4 561 aa19.33■□□□□ 0.68
CHKB-201ENST00000406938 ZDHHC19Q8WVZ1 309 aaPredicted RBP19.33■□□□□ 0.68
CHKB-201ENST00000406938 COQ8BQ96D53 544 aa19.33■□□□□ 0.68
CHKB-201ENST00000406938 ZNF764Q96H86 408 aaPredicted RBP19.33■□□□□ 0.68
CHKB-201ENST00000406938 OR52E6Q96RD3 313 aa19.33■□□□□ 0.68
CHKB-201ENST00000406938 DUSP26Q9BV47 211 aa19.33■□□□□ 0.68
CHKB-201ENST00000406938 ATAD3AQ9NVI7 634 aa19.33■□□□□ 0.68
CHKB-201ENST00000406938 EHD3Q9NZN3 535 aa19.33■□□□□ 0.68
CHKB-201ENST00000406938 CDC14AQ9UNH5 594 aa19.33■□□□□ 0.68
CHKB-201ENST00000406938 CYR61O00622 381 aa19.32■□□□□ 0.68
CHKB-201ENST00000406938 AIM2O14862 343 aa19.32■□□□□ 0.68
CHKB-201ENST00000406938 PGRMC2O15173 223 aa19.32■□□□□ 0.68
CHKB-201ENST00000406938 TBX19O60806 448 aa19.32■□□□□ 0.68
CHKB-201ENST00000406938 RNH1P13489 461 aaKnown RBP19.32■□□□□ 0.68
CHKB-201ENST00000406938 ETV5P41161 510 aa19.32■□□□□ 0.68
CHKB-201ENST00000406938 TLR1Q15399 786 aa19.32■□□□□ 0.68
CHKB-201ENST00000406938 SLC48A1Q6P1K1 146 aa19.32■□□□□ 0.68
CHKB-201ENST00000406938 SLC2A7Q6PXP3 512 aa19.32■□□□□ 0.68
CHKB-201ENST00000406938 FBXO27Q8NI29 283 aa19.32■□□□□ 0.68
CHKB-201ENST00000406938 EXOSC8Q96B26 276 aaKnown RBP19.32■□□□□ 0.68
CHKB-201ENST00000406938 CLIP3Q96DZ5 547 aa19.32■□□□□ 0.68
CHKB-201ENST00000406938 RTKNQ9BST9 563 aa19.32■□□□□ 0.68
CHKB-201ENST00000406938 RBCK1Q9BYM8 510 aa19.32■□□□□ 0.68
CHKB-201ENST00000406938 WDR41Q9HAD4 459 aa19.32■□□□□ 0.68
CHKB-201ENST00000406938 CLK4Q9HAZ1 481 aaKnown RBP19.32■□□□□ 0.68
CHKB-201ENST00000406938 LEF1Q9UJU2 399 aaPredicted RBP19.32■□□□□ 0.68
CHKB-201ENST00000406938 CCDC187A0A096LP49 1063 aa19.31■□□□□ 0.68
CHKB-201ENST00000406938 WASHC1A8K0Z3 465 aa19.31■□□□□ 0.68
CHKB-201ENST00000406938 MRASO14807 208 aa19.31■□□□□ 0.68
CHKB-201ENST00000406938 NTRK1P04629 796 aa19.31■□□□□ 0.68
CHKB-201ENST00000406938 JMJD7P0C870 316 aa19.31■□□□□ 0.68
CHKB-201ENST00000406938 TLX1P31314 330 aaPredicted RBP19.31■□□□□ 0.68
CHKB-201ENST00000406938 NUDT2P50583 147 aa19.31■□□□□ 0.68
CHKB-201ENST00000406938 MNAT1P51948 309 aa19.31■□□□□ 0.68
CHKB-201ENST00000406938 WNT3P56703 355 aa19.31■□□□□ 0.68
CHKB-201ENST00000406938 ACTN3Q08043 901 aaPredicted RBP19.31■□□□□ 0.68
CHKB-201ENST00000406938 DSG2Q14126 1118 aa19.31■□□□□ 0.68
CHKB-201ENST00000406938 MPEG1Q2M385 716 aa19.31■□□□□ 0.68
CHKB-201ENST00000406938 LACTB2Q53H82 288 aaPredicted RBP19.31■□□□□ 0.68
CHKB-201ENST00000406938 COQ5Q5HYK3 327 aa19.31■□□□□ 0.68
CHKB-201ENST00000406938 PAGE3Q5JUK9 113 aa19.31■□□□□ 0.68
CHKB-201ENST00000406938 FAM180BQ6P0A1 224 aa19.31■□□□□ 0.68
CHKB-201ENST00000406938 ANKRD46Q86W74 232 aa19.31■□□□□ 0.68
CHKB-201ENST00000406938 DSELQ8IZU8 1212 aa19.31■□□□□ 0.68
CHKB-201ENST00000406938 CIDECQ96AQ7 238 aaPredicted RBP19.31■□□□□ 0.68
CHKB-201ENST00000406938 PEX11GQ96HA9 241 aa19.31■□□□□ 0.68
CHKB-201ENST00000406938 GBP5Q96PP8 586 aa19.31■□□□□ 0.68
CHKB-201ENST00000406938 BHLHE41Q9C0J9 482 aaPredicted RBP19.31■□□□□ 0.68
CHKB-201ENST00000406938 RPF2Q9H7B2 306 aaKnown RBP19.31■□□□□ 0.68
CHKB-201ENST00000406938 ZNF304Q9HCX3 659 aa19.31■□□□□ 0.68
CHKB-201ENST00000406938 FAM120CQ9NX05 1096 aaKnown RBP19.31■□□□□ 0.68
CHKB-201ENST00000406938 PISDQ9UG56 409 aa19.31■□□□□ 0.68
CHKB-201ENST00000406938 UTS2RQ9UKP6 389 aa19.31■□□□□ 0.68
CHKB-201ENST00000406938 A0A1W2PNU3 283 aaPredicted RBP19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms