RNA–Protein interactions for RNA: ENST00000405807.8

COL4A3BP-204, Transcript of collagen type IV alpha 3 binding protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A3BP, Length 2,843 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-204ENST00000405807 PIAS3Q9Y6X2 628 aa15.53■□□□□ 0.08
COL4A3BP-204ENST00000405807 MYO16Q9Y6X6 1858 aa15.53■□□□□ 0.08
COL4A3BP-204ENST00000405807 TRABD2BA6NFA1 517 aa15.53■□□□□ 0.08
COL4A3BP-204ENST00000405807 CLCA1A8K7I4 914 aa15.53■□□□□ 0.08
COL4A3BP-204ENST00000405807 H3BQ06 376 aaPredicted RBP15.53■□□□□ 0.08
COL4A3BP-204ENST00000405807 RTCAO00442 366 aaKnown RBP15.53■□□□□ 0.08
COL4A3BP-204ENST00000405807 ITGB6P18564 788 aa15.53■□□□□ 0.08
COL4A3BP-204ENST00000405807 GRK4P32298 578 aa15.53■□□□□ 0.08
COL4A3BP-204ENST00000405807 NUP62P37198 522 aaPredicted RBP15.53■□□□□ 0.08
COL4A3BP-204ENST00000405807 ITGA1P56199 1179 aa15.53■□□□□ 0.08
COL4A3BP-204ENST00000405807 RING1Q06587 406 aa15.53■□□□□ 0.08
COL4A3BP-204ENST00000405807 TAB1Q15750 504 aa15.53■□□□□ 0.08
COL4A3BP-204ENST00000405807 SWI5Q1ZZU3 235 aa15.53■□□□□ 0.08
COL4A3BP-204ENST00000405807 TRIM48Q8IWZ4 208 aa15.53■□□□□ 0.08
COL4A3BP-204ENST00000405807 CYP4Z2PQ8N1L4 340 aa15.53■□□□□ 0.08
COL4A3BP-204ENST00000405807 KLHDC9Q8NEP7 349 aa15.53■□□□□ 0.08
COL4A3BP-204ENST00000405807 ZNF675Q8TD23 568 aa15.53■□□□□ 0.08
COL4A3BP-204ENST00000405807 HSH2DQ96JZ2 352 aa15.53■□□□□ 0.08
COL4A3BP-204ENST00000405807 GABARAPL3Q9BY60 117 aa15.53■□□□□ 0.08
COL4A3BP-204ENST00000405807 PPIL3Q9H2H8 161 aaKnown RBP15.53■□□□□ 0.08
COL4A3BP-204ENST00000405807 SPASTQ9UBP0 616 aa15.53■□□□□ 0.08
COL4A3BP-204ENST00000405807 TBC1D24Q9ULP9 559 aa15.53■□□□□ 0.08
COL4A3BP-204ENST00000405807 MGAT4BQ9UQ53 548 aa15.53■□□□□ 0.08
COL4A3BP-204ENST00000405807 DLGAP4Q9Y2H0 992 aa15.53■□□□□ 0.08
COL4A3BP-204ENST00000405807 TMEM238LA0A1B0GVL6 79 aa15.52■□□□□ 0.08
COL4A3BP-204ENST00000405807 EFCAB7A8K855 629 aa15.52■□□□□ 0.08
COL4A3BP-204ENST00000405807 KDELR3O43731 214 aa15.52■□□□□ 0.08
COL4A3BP-204ENST00000405807 ZNF7P17097 686 aaPredicted RBP15.52■□□□□ 0.08
COL4A3BP-204ENST00000405807 DGKAP23743 735 aa15.52■□□□□ 0.08
COL4A3BP-204ENST00000405807 SOX6P35712 828 aa15.52■□□□□ 0.08
COL4A3BP-204ENST00000405807 ATP5C1P36542 298 aaKnown RBP15.52■□□□□ 0.08
COL4A3BP-204ENST00000405807 ETV6P41212 452 aa15.52■□□□□ 0.08
COL4A3BP-204ENST00000405807 FNTBP49356 437 aa15.52■□□□□ 0.08
COL4A3BP-204ENST00000405807 CBLL1Q75N03 491 aa15.52■□□□□ 0.08
COL4A3BP-204ENST00000405807 C12orf40Q86WS4 652 aa15.52■□□□□ 0.08
COL4A3BP-204ENST00000405807 KLHL36Q8N4N3 616 aa15.52■□□□□ 0.08
COL4A3BP-204ENST00000405807 TCEAL3Q969E4 200 aa15.52■□□□□ 0.08
COL4A3BP-204ENST00000405807 ZNF251Q9BRH9 671 aa15.52■□□□□ 0.08
COL4A3BP-204ENST00000405807 ACPTQ9BZG2 426 aa15.52■□□□□ 0.08
COL4A3BP-204ENST00000405807 CRLF2Q9HC73 371 aa15.52■□□□□ 0.08
COL4A3BP-204ENST00000405807 TLR8Q9NR97 1041 aaKnown RBP15.52■□□□□ 0.08
COL4A3BP-204ENST00000405807 CLIC1O00299 241 aa15.52■□□□□ 0.07
COL4A3BP-204ENST00000405807 RIDAP52758 137 aaKnown RBP15.52■□□□□ 0.07
COL4A3BP-204ENST00000405807 UGT2B15P54855 530 aa15.52■□□□□ 0.07
COL4A3BP-204ENST00000405807 RAC1P63000 192 aa15.52■□□□□ 0.07
COL4A3BP-204ENST00000405807 SLC14A1Q13336 389 aa15.52■□□□□ 0.07
COL4A3BP-204ENST00000405807 HSD17B12Q53GQ0 312 aa15.52■□□□□ 0.07
COL4A3BP-204ENST00000405807 C17orf107Q6ZR85 190 aa15.52■□□□□ 0.07
COL4A3BP-204ENST00000405807 MSANTD1Q6ZTZ1 278 aa15.52■□□□□ 0.07
COL4A3BP-204ENST00000405807 RASAL3Q86YV0 1011 aa15.52■□□□□ 0.07
COL4A3BP-204ENST00000405807 UBTD2Q8WUN7 234 aa15.52■□□□□ 0.07
COL4A3BP-204ENST00000405807 GGHQ92820 318 aa15.52■□□□□ 0.07
COL4A3BP-204ENST00000405807 TSSK3Q96PN8 268 aa15.52■□□□□ 0.07
COL4A3BP-204ENST00000405807 FAM129BQ96TA1 746 aa15.52■□□□□ 0.07
COL4A3BP-204ENST00000405807 EPYCQ99645 322 aa15.52■□□□□ 0.07
COL4A3BP-204ENST00000405807 MMP28Q9H239 520 aa15.52■□□□□ 0.07
COL4A3BP-204ENST00000405807 SRRDQ9UH36 339 aa15.52■□□□□ 0.07
COL4A3BP-204ENST00000405807 LYVE1Q9Y5Y7 322 aa15.52■□□□□ 0.07
COL4A3BP-204ENST00000405807 MICAL3Q7RTP6 2002 aa15.52■□□□□ 0.07
COL4A3BP-204ENST00000405807 WRBO00258 174 aa15.51■□□□□ 0.07
COL4A3BP-204ENST00000405807 DPM1O60762 260 aa15.51■□□□□ 0.07
COL4A3BP-204ENST00000405807 KCNK5O95279 499 aa15.51■□□□□ 0.07
COL4A3BP-204ENST00000405807 CLDN9O95484 217 aa15.51■□□□□ 0.07
COL4A3BP-204ENST00000405807 VIPP01282 170 aa15.51■□□□□ 0.07
COL4A3BP-204ENST00000405807 EDN3P14138 238 aa15.51■□□□□ 0.07
COL4A3BP-204ENST00000405807 MAPK1P28482 360 aa15.51■□□□□ 0.07
COL4A3BP-204ENST00000405807 SLC19A1P41440 591 aa15.51■□□□□ 0.07
COL4A3BP-204ENST00000405807 GSTM5P46439 218 aa15.51■□□□□ 0.07
COL4A3BP-204ENST00000405807 ASMTP46597 345 aa15.51■□□□□ 0.07
COL4A3BP-204ENST00000405807 GPR153Q6NV75 609 aa15.51■□□□□ 0.07
COL4A3BP-204ENST00000405807 ZZZ3Q8IYH5 903 aa15.51■□□□□ 0.07
COL4A3BP-204ENST00000405807 DNAJC22Q8N4W6 341 aa15.51■□□□□ 0.07
COL4A3BP-204ENST00000405807 GPR152Q8TDT2 470 aa15.51■□□□□ 0.07
COL4A3BP-204ENST00000405807 TRMT61AQ96FX7 289 aaKnown RBP15.51■□□□□ 0.07
COL4A3BP-204ENST00000405807 COL21A1Q96P44 957 aa15.51■□□□□ 0.07
COL4A3BP-204ENST00000405807 LMAN2LQ9H0V9 348 aa15.51■□□□□ 0.07
COL4A3BP-204ENST00000405807 ATXN7L1Q9ULK2 861 aaPredicted RBP15.51■□□□□ 0.07
COL4A3BP-204ENST00000405807 CLEC4AQ9UMR7 237 aa15.51■□□□□ 0.07
COL4A3BP-204ENST00000405807 SMLR1H3BR10 107 aa15.51■□□□□ 0.07
COL4A3BP-204ENST00000405807 ABCD4O14678 606 aa15.51■□□□□ 0.07
COL4A3BP-204ENST00000405807 PCDH17O14917 1159 aa15.51■□□□□ 0.07
COL4A3BP-204ENST00000405807 KHNYNO15037 678 aaKnown RBP15.51■□□□□ 0.07
COL4A3BP-204ENST00000405807 GPR39O43194 453 aa15.51■□□□□ 0.07
COL4A3BP-204ENST00000405807 GGT2P36268 569 aa15.51■□□□□ 0.07
COL4A3BP-204ENST00000405807 RFX2P48378 723 aa15.51■□□□□ 0.07
COL4A3BP-204ENST00000405807 CASP6P55212 293 aa15.51■□□□□ 0.07
COL4A3BP-204ENST00000405807 IKZF1Q13422 519 aa15.51■□□□□ 0.07
COL4A3BP-204ENST00000405807 ALKBH1Q13686 389 aaKnown RBP15.51■□□□□ 0.07
COL4A3BP-204ENST00000405807 CPSF6Q16630 551 aaKnown RBP eCLIP15.51■□□□□ 0.07
COL4A3BP-204ENST00000405807 GNASQ5JWF2 1037 aa15.51■□□□□ 0.07
COL4A3BP-204ENST00000405807 CYB5R2Q6BCY4 276 aa15.51■□□□□ 0.07
COL4A3BP-204ENST00000405807 RAD9AQ99638 391 aa15.51■□□□□ 0.07
COL4A3BP-204ENST00000405807 OR51E2Q9H255 320 aa15.51■□□□□ 0.07
COL4A3BP-204ENST00000405807 PPT2Q9UMR5 302 aa15.51■□□□□ 0.07
COL4A3BP-204ENST00000405807 SLC30A4O14863 429 aa15.5■□□□□ 0.07
COL4A3BP-204ENST00000405807 STK16O75716 305 aa15.5■□□□□ 0.07
COL4A3BP-204ENST00000405807 APOL3O95236 402 aa15.5■□□□□ 0.07
COL4A3BP-204ENST00000405807 B3GALT4O96024 378 aa15.5■□□□□ 0.07
COL4A3BP-204ENST00000405807 PDYNP01213 254 aa15.5■□□□□ 0.07
COL4A3BP-204ENST00000405807 ZNF806P0C7X5 589 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms