RNA–Protein interactions for RNA: ENST00000400908.6

RERE-204, Transcript of arginine-glutamic acid dipeptide repeats, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RERE, Length 5,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RERE-204ENST00000400908 PER3P56645 1201 aa13.36□□□□□ -0.27
RERE-204ENST00000400908 PCBP2Q15366 365 aaKnown RBP eCLIP13.36□□□□□ -0.276e-8■■■■■ 27.7
RERE-204ENST00000400908 CYP27C1Q4G0S4 372 aa13.36□□□□□ -0.27
RERE-204ENST00000400908 RASGEF1CQ8N431 466 aa13.36□□□□□ -0.27
RERE-204ENST00000400908 LRRC52Q8N7C0 313 aa13.36□□□□□ -0.27
RERE-204ENST00000400908 BCAS3Q9H6U6 928 aa13.36□□□□□ -0.27
RERE-204ENST00000400908 METTL7AQ9H8H3 244 aa13.36□□□□□ -0.27
RERE-204ENST00000400908 LIN28AQ9H9Z2 209 aaKnown RBP13.36□□□□□ -0.27
RERE-204ENST00000400908 PLCXD1Q9NUJ7 323 aa13.36□□□□□ -0.27
RERE-204ENST00000400908 PCDHB11Q9Y5F2 797 aa13.36□□□□□ -0.27
RERE-204ENST00000400908 MAFBQ9Y5Q3 323 aaPredicted RBP13.36□□□□□ -0.27
RERE-204ENST00000400908 FMO6PO60774 539 aa13.36□□□□□ -0.27
RERE-204ENST00000400908 SERPINF1P36955 418 aa13.36□□□□□ -0.27
RERE-204ENST00000400908 CHRNA4P43681 627 aa13.36□□□□□ -0.27
RERE-204ENST00000400908 SOX9P48436 509 aa13.36□□□□□ -0.27
RERE-204ENST00000400908 BLKP51451 505 aa13.36□□□□□ -0.27
RERE-204ENST00000400908 C12orf29Q8N999 325 aa13.36□□□□□ -0.27
RERE-204ENST00000400908 PROKR1Q8TCW9 393 aa13.36□□□□□ -0.27
RERE-204ENST00000400908 FAM83CQ9BQN1 747 aa13.36□□□□□ -0.27
RERE-204ENST00000400908 ABCG5Q9H222 651 aa13.36□□□□□ -0.27
RERE-204ENST00000400908 ZNF442Q9H7R0 627 aa13.36□□□□□ -0.27
RERE-204ENST00000400908 FKBPLQ9UIM3 349 aa13.36□□□□□ -0.27
RERE-204ENST00000400908 SOX1O00570 391 aaPredicted RBP13.35□□□□□ -0.27
RERE-204ENST00000400908 PAHP00439 452 aa13.35□□□□□ -0.27
RERE-204ENST00000400908 UCHL1P09936 223 aa13.35□□□□□ -0.27
RERE-204ENST00000400908 NMBRP28336 390 aa13.35□□□□□ -0.27
RERE-204ENST00000400908 SLBPQ14493 270 aaKnown RBP eCLIP13.35□□□□□ -0.27
RERE-204ENST00000400908 FAM122CQ6P4D5 195 aa13.35□□□□□ -0.27
RERE-204ENST00000400908 RBM12BQ8IXT5 1001 aaKnown RBP13.35□□□□□ -0.27
RERE-204ENST00000400908 TCEANCQ8N8B7 351 aa13.35□□□□□ -0.27
RERE-204ENST00000400908 OR56A3Q8NH54 315 aa13.35□□□□□ -0.27
RERE-204ENST00000400908 DEDD2Q8WXF8 326 aa13.35□□□□□ -0.27
RERE-204ENST00000400908 HERVK_113Q902F9 699 aa13.35□□□□□ -0.27
RERE-204ENST00000400908 GLYATL1Q969I3 302 aa13.35□□□□□ -0.27
RERE-204ENST00000400908 HSH2DQ96JZ2 352 aa13.35□□□□□ -0.27
RERE-204ENST00000400908 POLDIP3Q9BY77 421 aaKnown RBP13.35□□□□□ -0.27
RERE-204ENST00000400908 NIFKQ9BYG3 293 aaKnown RBP13.35□□□□□ -0.27
RERE-204ENST00000400908 TTYH3Q9C0H2 523 aa13.35□□□□□ -0.27
RERE-204ENST00000400908 LHX5Q9H2C1 402 aa13.35□□□□□ -0.27
RERE-204ENST00000400908 ZIM2Q9NZV7 527 aa13.35□□□□□ -0.27
RERE-204ENST00000400908 TP53TG5Q9Y2B4 290 aa13.35□□□□□ -0.27
RERE-204ENST00000400908 DNMT3AQ9Y6K1 912 aaPredicted RBP13.35□□□□□ -0.27
RERE-204ENST00000400908 ANKRD28O15084 1053 aa13.35□□□□□ -0.27
RERE-204ENST00000400908 PRKYO43930 277 aa13.35□□□□□ -0.27
RERE-204ENST00000400908 ZNF182P17025 639 aaPredicted RBP13.35□□□□□ -0.27
RERE-204ENST00000400908 FKBP1BP68106 108 aa13.35□□□□□ -0.27
RERE-204ENST00000400908 SPPL2BQ8TCT7 592 aa13.35□□□□□ -0.27
RERE-204ENST00000400908 ESAMQ96AP7 390 aa13.35□□□□□ -0.27
RERE-204ENST00000400908 HS6ST2Q96MM7 605 aa13.35□□□□□ -0.27
RERE-204ENST00000400908 TTTY10Q9BZA0 68 aa13.35□□□□□ -0.27
RERE-204ENST00000400908 A0A0G2JN53 185 aa13.35□□□□□ -0.27
RERE-204ENST00000400908 TEX51A0A1B0GUA7 166 aa13.35□□□□□ -0.27
RERE-204ENST00000400908 NFKBIEO00221 500 aa13.35□□□□□ -0.27
RERE-204ENST00000400908 GOSR2O14653 212 aa13.35□□□□□ -0.27
RERE-204ENST00000400908 GRM5P41594 1212 aa13.35□□□□□ -0.27
RERE-204ENST00000400908 CX3CR1P49238 355 aa13.35□□□□□ -0.27
RERE-204ENST00000400908 TAS2R20P59543 309 aa13.35□□□□□ -0.27
RERE-204ENST00000400908 GAD2Q05329 585 aa13.35□□□□□ -0.27
RERE-204ENST00000400908 KCNIP4Q6PIL6 250 aa13.35□□□□□ -0.27
RERE-204ENST00000400908 TMPRSS12Q86WS5 348 aa13.35□□□□□ -0.27
RERE-204ENST00000400908 FAM83FQ8NEG4 500 aaPredicted RBP13.35□□□□□ -0.27
RERE-204ENST00000400908 PHOSPHO1Q8TCT1 267 aa13.35□□□□□ -0.27
RERE-204ENST00000400908 OSBPL7Q9BZF2 842 aa13.35□□□□□ -0.27
RERE-204ENST00000400908 XPNPEP1Q9NQW7 623 aa13.35□□□□□ -0.27
RERE-204ENST00000400908 MS4A12Q9NXJ0 267 aa13.35□□□□□ -0.27
RERE-204ENST00000400908 CDC7O00311 574 aa13.35□□□□□ -0.27
RERE-204ENST00000400908 CXCL14O95715 111 aa13.35□□□□□ -0.27
RERE-204ENST00000400908 HOXD8P13378 290 aaPredicted RBP13.35□□□□□ -0.27
RERE-204ENST00000400908 MLLT3P42568 568 aaPredicted RBP13.35□□□□□ -0.27
RERE-204ENST00000400908 RSU1Q15404 277 aa13.35□□□□□ -0.27
RERE-204ENST00000400908 TAF1AQ15573 450 aaPredicted RBP13.35□□□□□ -0.27
RERE-204ENST00000400908 PAPD4Q6PIY7 484 aaKnown RBP13.35□□□□□ -0.27
RERE-204ENST00000400908 SLAIN1Q8ND83 568 aa13.35□□□□□ -0.27
RERE-204ENST00000400908 OR51G2Q8NGK0 314 aa13.35□□□□□ -0.27
RERE-204ENST00000400908 CNOT9Q92600 299 aaKnown RBP13.35□□□□□ -0.27
RERE-204ENST00000400908 C17orf62Q9BQA9 187 aa13.35□□□□□ -0.27
RERE-204ENST00000400908 ST6GALNAC4Q9H4F1 302 aa13.35□□□□□ -0.27
RERE-204ENST00000400908 CCL22O00626 93 aa13.35□□□□□ -0.27
RERE-204ENST00000400908 MMP3P08254 477 aa13.35□□□□□ -0.27
RERE-204ENST00000400908 THBS2P35442 1172 aa13.35□□□□□ -0.27
RERE-204ENST00000400908 ARL2P36404 184 aa13.35□□□□□ -0.27
RERE-204ENST00000400908 DGKEP52429 567 aa13.35□□□□□ -0.27
RERE-204ENST00000400908 HERVK_113P63132 956 aa13.35□□□□□ -0.27
RERE-204ENST00000400908 CYCSP99999 105 aaKnown RBP13.35□□□□□ -0.27
RERE-204ENST00000400908 DUSP28Q4G0W2 176 aa13.35□□□□□ -0.27
RERE-204ENST00000400908 RNASE10Q5GAN6 216 aaKnown RBP13.35□□□□□ -0.27
RERE-204ENST00000400908 FAM205BPQ63HN1 556 aa13.35□□□□□ -0.27
RERE-204ENST00000400908 OR4F3Q6IEY1 312 aa13.35□□□□□ -0.27
RERE-204ENST00000400908 ANKRD54Q6NXT1 300 aa13.35□□□□□ -0.27
RERE-204ENST00000400908 TMPPEQ6ZT21 453 aa13.35□□□□□ -0.27
RERE-204ENST00000400908 ALDH16A1Q8IZ83 802 aa13.35□□□□□ -0.27
RERE-204ENST00000400908 TRMT10AQ8TBZ6 339 aaKnown RBP13.35□□□□□ -0.27
RERE-204ENST00000400908 ZFAND2BQ8WV99 257 aa13.35□□□□□ -0.27
RERE-204ENST00000400908 LPPQ93052 612 aa13.35□□□□□ -0.27
RERE-204ENST00000400908 ISOC1Q96CN7 298 aa13.35□□□□□ -0.27
RERE-204ENST00000400908 DAZAP1Q96EP5 407 aaKnown RBP13.35□□□□□ -0.27
RERE-204ENST00000400908 CCDC32Q9BV29 185 aa13.35□□□□□ -0.27
RERE-204ENST00000400908 ERVK-6Q9BXR3 956 aa13.35□□□□□ -0.27
RERE-204ENST00000400908 RPF2Q9H7B2 306 aaKnown RBP13.35□□□□□ -0.27
RERE-204ENST00000400908 NR2E3Q9Y5X4 410 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms