RNA–Protein interactions for RNA: ENST00000399455.2

USP47-203, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene USP47, Length 7,396 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-203ENST00000399455 DGCR6Q14129 220 aa7.63□□□□□ -1.19
USP47-203ENST00000399455 PM20D1Q6GTS8 502 aa7.63□□□□□ -1.19
USP47-203ENST00000399455 OPN5Q6U736 354 aa7.63□□□□□ -1.19
USP47-203ENST00000399455 CHCHD4Q8N4Q1 142 aa7.63□□□□□ -1.19
USP47-203ENST00000399455 ZNF565Q8N9K5 539 aa7.63□□□□□ -1.19
USP47-203ENST00000399455 OR7A2PQ8NGA2 310 aa7.63□□□□□ -1.19
USP47-203ENST00000399455 KAT2AQ92830 837 aa7.63□□□□□ -1.19
USP47-203ENST00000399455 PKP4Q99569 1192 aa7.63□□□□□ -1.19
USP47-203ENST00000399455 DLGAP2Q9P1A6 1054 aa7.63□□□□□ -1.19
USP47-203ENST00000399455 PSMG1O95456 288 aa7.63□□□□□ -1.19
USP47-203ENST00000399455 DBIP07108 87 aaKnown RBP7.63□□□□□ -1.19
USP47-203ENST00000399455 EDNRAP25101 427 aa7.63□□□□□ -1.19
USP47-203ENST00000399455 SLC18A2Q05940 514 aa7.63□□□□□ -1.19
USP47-203ENST00000399455 NFE2L1Q14494 772 aa7.63□□□□□ -1.19
USP47-203ENST00000399455 FASTKD3Q14CZ7 662 aaKnown RBP7.63□□□□□ -1.19
USP47-203ENST00000399455 ZNF765Q7L2R6 523 aa7.63□□□□□ -1.19
USP47-203ENST00000399455 SPPL2CQ8IUH8 684 aa7.63□□□□□ -1.19
USP47-203ENST00000399455 SDR16C5Q8N3Y7 309 aa7.63□□□□□ -1.19
USP47-203ENST00000399455 MFSD2AQ8NA29 543 aa7.63□□□□□ -1.19
USP47-203ENST00000399455 THEM6Q8WUY1 208 aa7.63□□□□□ -1.19
USP47-203ENST00000399455 ARRDC3Q96B67 414 aa7.63□□□□□ -1.19
USP47-203ENST00000399455 CLPTM1LQ96KA5 538 aa7.63□□□□□ -1.19
USP47-203ENST00000399455 ZPBPQ9BS86 351 aa7.63□□□□□ -1.19
USP47-203ENST00000399455 ATP13A2Q9NQ11 1180 aa7.63□□□□□ -1.19
USP47-203ENST00000399455 PAK6Q9NQU5 681 aaPredicted RBP7.63□□□□□ -1.19
USP47-203ENST00000399455 DKK3Q9UBP4 350 aa7.63□□□□□ -1.19
USP47-203ENST00000399455 SLC2A6Q9UGQ3 507 aa7.63□□□□□ -1.19
USP47-203ENST00000399455 MEMO1Q9Y316 297 aa7.63□□□□□ -1.19
USP47-203ENST00000399455 RNF11Q9Y3C5 154 aa7.63□□□□□ -1.19
USP47-203ENST00000399455 CLIC1O00299 241 aa7.62□□□□□ -1.19
USP47-203ENST00000399455 PLD2O14939 933 aa7.62□□□□□ -1.19
USP47-203ENST00000399455 MAFKO60675 156 aa7.62□□□□□ -1.19
USP47-203ENST00000399455 C6orf47O95873 294 aa7.62□□□□□ -1.19
USP47-203ENST00000399455 PDYNP01213 254 aa7.62□□□□□ -1.19
USP47-203ENST00000399455 EFNA1P20827 205 aaPredicted RBP7.62□□□□□ -1.19
USP47-203ENST00000399455 GADD45AP24522 165 aa7.62□□□□□ -1.19
USP47-203ENST00000399455 GRK5P34947 590 aa7.62□□□□□ -1.19
USP47-203ENST00000399455 GPLD1P80108 840 aa7.62□□□□□ -1.19
USP47-203ENST00000399455 MFSD13AQ14CX5 517 aa7.62□□□□□ -1.19
USP47-203ENST00000399455 TIGD6Q17RP2 521 aa7.62□□□□□ -1.19
USP47-203ENST00000399455 TTMPQ5BVD1 217 aa7.62□□□□□ -1.19
USP47-203ENST00000399455 LAPTM4BQ86VI4 370 aa7.62□□□□□ -1.19
USP47-203ENST00000399455 ZDHHC21Q8IVQ6 265 aa7.62□□□□□ -1.19
USP47-203ENST00000399455 PAPD5Q8NDF8 572 aaKnown RBP7.62□□□□□ -1.19
USP47-203ENST00000399455 FAM122AQ96E09 287 aa7.62□□□□□ -1.19
USP47-203ENST00000399455 EMC9Q9Y3B6 208 aa7.62□□□□□ -1.19
USP47-203ENST00000399455 PCDHB14Q9Y5E9 798 aa7.62□□□□□ -1.19
USP47-203ENST00000399455 A6NLC8 198 aa7.62□□□□□ -1.19
USP47-203ENST00000399455 ZNF879B4DU55 563 aa7.62□□□□□ -1.19
USP47-203ENST00000399455 SNPHO15079 494 aa7.62□□□□□ -1.19
USP47-203ENST00000399455 C9P02748 559 aa7.62□□□□□ -1.19
USP47-203ENST00000399455 ZNF35P13682 527 aa7.62□□□□□ -1.19
USP47-203ENST00000399455 PBX1P40424 430 aa7.62□□□□□ -1.19
USP47-203ENST00000399455 SCRN3Q0VDG4 424 aa7.62□□□□□ -1.19
USP47-203ENST00000399455 KLF10Q13118 480 aa7.62□□□□□ -1.19
USP47-203ENST00000399455 PCBP2Q15366 365 aaKnown RBP eCLIP7.62□□□□□ -1.19
USP47-203ENST00000399455 LARP4Q71RC2 724 aaKnown RBP eCLIP7.62□□□□□ -1.192e-6■■■■□ 26.4
USP47-203ENST00000399455 MCATQ8IVS2 390 aaKnown RBP7.62□□□□□ -1.19
USP47-203ENST00000399455 IQCF2Q8IXL9 164 aa7.62□□□□□ -1.19
USP47-203ENST00000399455 MRPL41Q8IXM3 137 aaKnown RBP7.62□□□□□ -1.19
USP47-203ENST00000399455 NLGN4XQ8N0W4 816 aa7.62□□□□□ -1.19
USP47-203ENST00000399455 OR8K5Q8NH50 307 aa7.62□□□□□ -1.19
USP47-203ENST00000399455 PYDC1Q8WXC3 89 aa7.62□□□□□ -1.19
USP47-203ENST00000399455 TRIM43Q96BQ3 446 aaPredicted RBP7.62□□□□□ -1.19
USP47-203ENST00000399455 C1GALT1C1Q96EU7 318 aa7.62□□□□□ -1.19
USP47-203ENST00000399455 DLGAP4Q9Y2H0 992 aa7.62□□□□□ -1.19
USP47-203ENST00000399455 hCG_1807616A0A1W2PRN6 198 aa7.62□□□□□ -1.19
USP47-203ENST00000399455 CBX6O95503 412 aa7.62□□□□□ -1.19
USP47-203ENST00000399455 MAPK3P27361 379 aaPredicted RBP7.62□□□□□ -1.19
USP47-203ENST00000399455 ST3GAL4Q11206 333 aa7.62□□□□□ -1.19
USP47-203ENST00000399455 CYP1B1Q16678 543 aa7.62□□□□□ -1.19
USP47-203ENST00000399455 CRB2Q5IJ48 1285 aa7.62□□□□□ -1.19
USP47-203ENST00000399455 SLC15A3Q8IY34 581 aa7.62□□□□□ -1.19
USP47-203ENST00000399455 XYLT2Q9H1B5 865 aa7.62□□□□□ -1.19
USP47-203ENST00000399455 WASH6PQ9NQA3 447 aa7.62□□□□□ -1.19
USP47-203ENST00000399455 RPL36Q9Y3U8 105 aaKnown RBP7.62□□□□□ -1.19
USP47-203ENST00000399455 BPIP17213 487 aa7.62□□□□□ -1.19
USP47-203ENST00000399455 GLDCP23378 1020 aa7.62□□□□□ -1.19
USP47-203ENST00000399455 OR3A3P47888 321 aa7.62□□□□□ -1.19
USP47-203ENST00000399455 OR3A2P47893 321 aa7.62□□□□□ -1.19
USP47-203ENST00000399455 SSR4P51571 173 aa7.62□□□□□ -1.19
USP47-203ENST00000399455 IL10RAQ13651 578 aa7.62□□□□□ -1.19
USP47-203ENST00000399455 CLDN19Q8N6F1 224 aa7.62□□□□□ -1.19
USP47-203ENST00000399455 CNEP1R1Q8N9A8 125 aa7.62□□□□□ -1.19
USP47-203ENST00000399455 NAT8LQ8N9F0 302 aa7.62□□□□□ -1.19
USP47-203ENST00000399455 OR8S1Q8NH09 359 aa7.62□□□□□ -1.19
USP47-203ENST00000399455 PGAP3Q96FM1 320 aaPredicted RBP7.62□□□□□ -1.19
USP47-203ENST00000399455 OXSMQ9NWU1 459 aa7.62□□□□□ -1.19
USP47-203ENST00000399455 ZKSCAN7Q9P0L1 754 aaPredicted RBP7.62□□□□□ -1.19
USP47-203ENST00000399455 A0A0X1KG70 313 aa7.62□□□□□ -1.19
USP47-203ENST00000399455 C17orf105B2RV13 164 aa7.62□□□□□ -1.19
USP47-203ENST00000399455 KLRC4-KLRK1H3BQV0 150 aa7.62□□□□□ -1.19
USP47-203ENST00000399455 MSL3P1P0C860 447 aa7.62□□□□□ -1.19
USP47-203ENST00000399455 NR4A1P22736 598 aa7.62□□□□□ -1.19
USP47-203ENST00000399455 CDK6Q00534 326 aa7.62□□□□□ -1.19
USP47-203ENST00000399455 MGAT3Q09327 533 aa7.62□□□□□ -1.19
USP47-203ENST00000399455 TGFBIQ15582 683 aa7.62□□□□□ -1.19
USP47-203ENST00000399455 ACSBG2Q5FVE4 666 aa7.62□□□□□ -1.19
USP47-203ENST00000399455 CCDC116Q8IYX3 515 aa7.62□□□□□ -1.19
USP47-203ENST00000399455 CBARPQ8N350 705 aaPredicted RBP7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms