RNA–Protein interactions for RNA: ENST00000399306.6

CTNS-203, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 3 BASIC

Gene CTNS, Length 803 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-203ENST00000399306 ACSM2BQ68CK6 577 aa16.62■□□□□ 0.25
CTNS-203ENST00000399306 CLEC6AQ6EIG7 209 aa16.62■□□□□ 0.25
CTNS-203ENST00000399306 C19orf48Q6RUI8 117 aa16.62■□□□□ 0.25
CTNS-203ENST00000399306 SHISA6Q6ZSJ9 500 aa16.62■□□□□ 0.25
CTNS-203ENST00000399306 LSM14AQ8ND56 463 aaKnown RBP16.62■□□□□ 0.25
CTNS-203ENST00000399306 OR11G2Q8NGC1 345 aa16.62■□□□□ 0.25
CTNS-203ENST00000399306 TANKQ92844 425 aa16.62■□□□□ 0.25
CTNS-203ENST00000399306 MAPKAP1Q9BPZ7 522 aa16.62■□□□□ 0.25
CTNS-203ENST00000399306 SHCBP1LQ9BZQ2 653 aa16.62■□□□□ 0.25
CTNS-203ENST00000399306 ZNF700Q9H0M5 742 aa16.62■□□□□ 0.25
CTNS-203ENST00000399306 WDR41Q9HAD4 459 aa16.62■□□□□ 0.25
CTNS-203ENST00000399306 ZDHHC2Q9UIJ5 367 aa16.62■□□□□ 0.25
CTNS-203ENST00000399306 TUBD1Q9UJT1 453 aa16.62■□□□□ 0.25
CTNS-203ENST00000399306 TMED5Q9Y3A6 229 aa16.62■□□□□ 0.25
CTNS-203ENST00000399306 TCRBV16S1A1N1A0A5B0 115 aa16.61■□□□□ 0.25
CTNS-203ENST00000399306 ERVH48-1M5A8F1 160 aa16.61■□□□□ 0.25
CTNS-203ENST00000399306 TMPRSS11DO60235 418 aa16.61■□□□□ 0.25
CTNS-203ENST00000399306 HPP00738 406 aa16.61■□□□□ 0.25
CTNS-203ENST00000399306 KLK1P06870 262 aa16.61■□□□□ 0.25
CTNS-203ENST00000399306 ICAM2P13598 275 aa16.61■□□□□ 0.25
CTNS-203ENST00000399306 CPN2P22792 545 aa16.61■□□□□ 0.25
CTNS-203ENST00000399306 SERPINB3P29508 390 aa16.61■□□□□ 0.25
CTNS-203ENST00000399306 ATP1A4Q13733 1029 aa16.61■□□□□ 0.25
CTNS-203ENST00000399306 SERTAD2Q14140 314 aa16.61■□□□□ 0.25
CTNS-203ENST00000399306 TERF2Q15554 542 aa16.61■□□□□ 0.25
CTNS-203ENST00000399306 NSDHLQ15738 373 aa16.61■□□□□ 0.25
CTNS-203ENST00000399306 TBR1Q16650 682 aa16.61■□□□□ 0.25
CTNS-203ENST00000399306 DEFB109BQ30KR1 87 aa16.61■□□□□ 0.25
CTNS-203ENST00000399306 CCNYL2Q5T2Q4 361 aa16.61■□□□□ 0.25
CTNS-203ENST00000399306 ATP1A1-AS1Q5TC04 95 aa16.61■□□□□ 0.25
CTNS-203ENST00000399306 FAM69BQ5VUD6 431 aa16.61■□□□□ 0.25
CTNS-203ENST00000399306 ATG14Q6ZNE5 492 aa16.61■□□□□ 0.25
CTNS-203ENST00000399306 NDUFAF7Q7L592 441 aa16.61■□□□□ 0.25
CTNS-203ENST00000399306 PRSS58Q8IYP2 241 aa16.61■□□□□ 0.25
CTNS-203ENST00000399306 LRRC34Q8IZ02 419 aa16.61■□□□□ 0.25
CTNS-203ENST00000399306 C1orf52Q8N6N3 182 aaKnown RBP16.61■□□□□ 0.25
CTNS-203ENST00000399306 MGARPQ8TDB4 240 aa16.61■□□□□ 0.25
CTNS-203ENST00000399306 TWIST2Q8WVJ9 160 aa16.61■□□□□ 0.25
CTNS-203ENST00000399306 TTC9Q92623 222 aa16.61■□□□□ 0.25
CTNS-203ENST00000399306 HBEGFQ99075 208 aa16.61■□□□□ 0.25
CTNS-203ENST00000399306 SORT1Q99523 831 aa16.61■□□□□ 0.25
CTNS-203ENST00000399306 TUBB6Q9BUF5 446 aa16.61■□□□□ 0.25
CTNS-203ENST00000399306 ADNPQ9H2P0 1102 aa16.61■□□□□ 0.25
CTNS-203ENST00000399306 TUBB1Q9H4B7 451 aa16.61■□□□□ 0.25
CTNS-203ENST00000399306 MANSC1Q9H8J5 431 aa16.61■□□□□ 0.25
CTNS-203ENST00000399306 MLXIPLQ9NP71 852 aa16.61■□□□□ 0.25
CTNS-203ENST00000399306 PRTFDC1Q9NRG1 225 aa16.61■□□□□ 0.25
CTNS-203ENST00000399306 RIC8BQ9NVN3 520 aa16.61■□□□□ 0.25
CTNS-203ENST00000399306 IGHV1-45A0A0A0MS14 117 aa16.6■□□□□ 0.25
CTNS-203ENST00000399306 DYNC1I1O14576 645 aa16.6■□□□□ 0.25
CTNS-203ENST00000399306 ITM2AO43736 263 aa16.6■□□□□ 0.25
CTNS-203ENST00000399306 B4GALT2O60909 372 aa16.6■□□□□ 0.25
CTNS-203ENST00000399306 CHN1P15882 459 aa16.6■□□□□ 0.25
CTNS-203ENST00000399306 RPL14P50914 215 aaKnown RBP16.6■□□□□ 0.25
CTNS-203ENST00000399306 HK2P52789 917 aa16.6■□□□□ 0.25
CTNS-203ENST00000399306 EFNA3P52797 238 aa16.6■□□□□ 0.25
CTNS-203ENST00000399306 MAPK12P53778 367 aa16.6■□□□□ 0.25
CTNS-203ENST00000399306 HNRNPH2P55795 449 aaKnown RBP16.6■□□□□ 0.25
CTNS-203ENST00000399306 FOXL2P58012 376 aa16.6■□□□□ 0.25
CTNS-203ENST00000399306 HMGCS1Q01581 520 aa16.6■□□□□ 0.25
CTNS-203ENST00000399306 AIMP2Q13155 320 aaKnown RBP16.6■□□□□ 0.25
CTNS-203ENST00000399306 SMU1Q2TAY7 513 aa16.6■□□□□ 0.25
CTNS-203ENST00000399306 HSP90B2PQ58FF3 399 aa16.6■□□□□ 0.25
CTNS-203ENST00000399306 XKR7Q5GH72 579 aa16.6■□□□□ 0.25
CTNS-203ENST00000399306 DCAF10Q5QP82 559 aa16.6■□□□□ 0.25
CTNS-203ENST00000399306 MFSD4BQ5TF39 518 aa16.6■□□□□ 0.25
CTNS-203ENST00000399306 Q6ZSR9 355 aa16.6■□□□□ 0.25
CTNS-203ENST00000399306 CPEB2Q7Z5Q1 589 aaKnown RBP16.6■□□□□ 0.25
CTNS-203ENST00000399306 ANKRD37Q7Z713 158 aa16.6■□□□□ 0.25
CTNS-203ENST00000399306 FCRL1Q96LA6 429 aa16.6■□□□□ 0.25
CTNS-203ENST00000399306 PTCHD1Q96NR3 888 aa16.6■□□□□ 0.25
CTNS-203ENST00000399306 SORBS1Q9BX66 1292 aaKnown RBP16.6■□□□□ 0.25
CTNS-203ENST00000399306 RPF2Q9H7B2 306 aaKnown RBP16.6■□□□□ 0.25
CTNS-203ENST00000399306 ATP13A2Q9NQ11 1180 aa16.6■□□□□ 0.25
CTNS-203ENST00000399306 C1orf109Q9NX04 203 aa16.6■□□□□ 0.25
CTNS-203ENST00000399306 FBXL4Q9UKA2 621 aa16.6■□□□□ 0.25
CTNS-203ENST00000399306 FBXW2Q9UKT8 454 aa16.6■□□□□ 0.25
CTNS-203ENST00000399306 ATG4BQ9Y4P1 393 aa16.6■□□□□ 0.25
CTNS-203ENST00000399306 FAM227AF5H4B4 570 aa16.59■□□□□ 0.25
CTNS-203ENST00000399306 SLCO1B7G3V0H7 640 aa16.59■□□□□ 0.25
CTNS-203ENST00000399306 PCDH7O60245 1069 aa16.59■□□□□ 0.25
CTNS-203ENST00000399306 CEACAM4O75871 244 aa16.59■□□□□ 0.25
CTNS-203ENST00000399306 MYO1DO94832 1006 aa16.59■□□□□ 0.25
CTNS-203ENST00000399306 ATXN8OSP0DMR3 200 aa16.59■□□□□ 0.25
CTNS-203ENST00000399306 NR2F6P10588 404 aa16.59■□□□□ 0.25
CTNS-203ENST00000399306 SFTPCP11686 197 aa16.59■□□□□ 0.25
CTNS-203ENST00000399306 COX6A1P12074 109 aa16.59■□□□□ 0.25
CTNS-203ENST00000399306 NR1D1P20393 614 aa16.59■□□□□ 0.25
CTNS-203ENST00000399306 TIA1P31483 386 aaKnown RBP eCLIP16.59■□□□□ 0.25
CTNS-203ENST00000399306 IGLV3-21P80748 117 aaPredicted RBP16.59■□□□□ 0.25
CTNS-203ENST00000399306 OCRLQ01968 901 aa16.59■□□□□ 0.25
CTNS-203ENST00000399306 KIAA0040Q15053 153 aa16.59■□□□□ 0.25
CTNS-203ENST00000399306 PCOLCEQ15113 449 aa16.59■□□□□ 0.25
CTNS-203ENST00000399306 RIPOR1Q6ZS17 1223 aa16.59■□□□□ 0.25
CTNS-203ENST00000399306 TMEM151BQ8IW70 566 aa16.59■□□□□ 0.25
CTNS-203ENST00000399306 PARP9Q8IXQ6 854 aa16.59■□□□□ 0.25
CTNS-203ENST00000399306 ARFGAP2Q8N6H7 521 aa16.59■□□□□ 0.25
CTNS-203ENST00000399306 EFCAB3Q8N7B9 438 aa16.59■□□□□ 0.25
CTNS-203ENST00000399306 FAM47BQ8NA70 645 aa16.59■□□□□ 0.25
CTNS-203ENST00000399306 CLEC1AQ8NC01 280 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms