RNA–Protein interactions for RNA: ENST00000399120.5

HLCS-202, Transcript of holocarboxylase synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HLCS, Length 6,466 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-202ENST00000399120 CDK3Q00526 305 aa11.21□□□□□ -0.61
HLCS-202ENST00000399120 DGKZQ13574 1117 aa11.21□□□□□ -0.61
HLCS-202ENST00000399120 GALNT10Q86SR1 603 aa11.21□□□□□ -0.61
HLCS-202ENST00000399120 TMPRSS12Q86WS5 348 aa11.21□□□□□ -0.61
HLCS-202ENST00000399120 MARVELD2Q8N4S9 558 aa11.21□□□□□ -0.61
HLCS-202ENST00000399120 ZNF675Q8TD23 568 aa11.21□□□□□ -0.61
HLCS-202ENST00000399120 GCDHQ92947 438 aaPredicted RBP11.21□□□□□ -0.61
HLCS-202ENST00000399120 MAELQ96JY0 434 aaKnown RBP11.21□□□□□ -0.61
HLCS-202ENST00000399120 C7orf50Q9BRJ6 194 aaKnown RBP11.21□□□□□ -0.61
HLCS-202ENST00000399120 SAV1Q9H4B6 383 aaPredicted RBP11.21□□□□□ -0.61
HLCS-202ENST00000399120 SLC2A4RGQ9NR83 387 aa11.21□□□□□ -0.61
HLCS-202ENST00000399120 HAO2Q9NYQ3 351 aa11.21□□□□□ -0.61
HLCS-202ENST00000399120 GPRC5BQ9NZH0 403 aa11.21□□□□□ -0.61
HLCS-202ENST00000399120 PREX2Q70Z35 1606 aa11.21□□□□□ -0.61
HLCS-202ENST00000399120 ADGRB3O60242 1522 aa11.21□□□□□ -0.61
HLCS-202ENST00000399120 NWD1Q149M9 1564 aa11.21□□□□□ -0.61
HLCS-202ENST00000399120 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.21□□□□□ -0.61
HLCS-202ENST00000399120 IDH3GP51553 393 aaPredicted RBP11.21□□□□□ -0.61
HLCS-202ENST00000399120 REEP3Q6NUK4 255 aa11.21□□□□□ -0.61
HLCS-202ENST00000399120 C3P1Q6ZMU1 363 aa11.21□□□□□ -0.61
HLCS-202ENST00000399120 TICAM1Q8IUC6 712 aa11.21□□□□□ -0.61
HLCS-202ENST00000399120 LIX1LQ8IVB5 337 aa11.21□□□□□ -0.61
HLCS-202ENST00000399120 MRPL41Q8IXM3 137 aaKnown RBP11.21□□□□□ -0.61
HLCS-202ENST00000399120 BIRC7Q96CA5 298 aa11.21□□□□□ -0.61
HLCS-202ENST00000399120 ARL5BQ96KC2 179 aa11.21□□□□□ -0.61
HLCS-202ENST00000399120 NAA11Q9BSU3 229 aaPredicted RBP11.21□□□□□ -0.61
HLCS-202ENST00000399120 MRIQ9BWK5 157 aa11.21□□□□□ -0.61
HLCS-202ENST00000399120 TMEM9Q9P0T7 183 aa11.21□□□□□ -0.61
HLCS-202ENST00000399120 PLAGL1Q9UM63 463 aa11.21□□□□□ -0.61
HLCS-202ENST00000399120 GPR25O00155 361 aa11.21□□□□□ -0.62
HLCS-202ENST00000399120 DUSP11O75319 330 aaKnown RBP11.21□□□□□ -0.62
HLCS-202ENST00000399120 CPNE6O95741 557 aa11.21□□□□□ -0.62
HLCS-202ENST00000399120 PTGIRP43119 386 aa11.21□□□□□ -0.62
HLCS-202ENST00000399120 FADDQ13158 208 aa11.21□□□□□ -0.62
HLCS-202ENST00000399120 PIGGQ5H8A4 983 aa11.21□□□□□ -0.62
HLCS-202ENST00000399120 TPGS2Q68CL5 300 aa11.21□□□□□ -0.62
HLCS-202ENST00000399120 ZNF529Q6P280 563 aa11.21□□□□□ -0.62
HLCS-202ENST00000399120 CEACAM19Q7Z692 300 aa11.21□□□□□ -0.62
HLCS-202ENST00000399120 CARM1Q86X55 608 aa11.21□□□□□ -0.62
HLCS-202ENST00000399120 MAPK15Q8TD08 544 aa11.21□□□□□ -0.62
HLCS-202ENST00000399120 FAM46BQ96A09 425 aa11.21□□□□□ -0.62
HLCS-202ENST00000399120 CDKN2AIPNLQ96HQ2 116 aa11.21□□□□□ -0.62
HLCS-202ENST00000399120 OR1F2PQ96R84 312 aa11.21□□□□□ -0.62
HLCS-202ENST00000399120 SLC7A8Q9UHI5 535 aa11.21□□□□□ -0.62
HLCS-202ENST00000399120 C2orf72A6NCS6 295 aa11.21□□□□□ -0.62
HLCS-202ENST00000399120 HCRTR2O43614 444 aa11.21□□□□□ -0.62
HLCS-202ENST00000399120 ATE1O95260 518 aa11.21□□□□□ -0.62
HLCS-202ENST00000399120 GDF10P55107 478 aa11.21□□□□□ -0.62
HLCS-202ENST00000399120 SSX2Q16385 188 aa11.21□□□□□ -0.62
HLCS-202ENST00000399120 ZNF829Q3KNS6 432 aaPredicted RBP11.21□□□□□ -0.62
HLCS-202ENST00000399120 ZNF619Q8N2I2 560 aa11.21□□□□□ -0.62
HLCS-202ENST00000399120 ACBD4Q8NC06 268 aa11.21□□□□□ -0.62
HLCS-202ENST00000399120 MYRFLQ96LU7 910 aa11.21□□□□□ -0.62
HLCS-202ENST00000399120 MMP27Q9H306 513 aa11.21□□□□□ -0.62
HLCS-202ENST00000399120 PRTFDC1Q9NRG1 225 aa11.21□□□□□ -0.62
HLCS-202ENST00000399120 FTCDNL1E5RQL4 147 aa11.2□□□□□ -0.62
HLCS-202ENST00000399120 AKR1C4P17516 323 aa11.2□□□□□ -0.62
HLCS-202ENST00000399120 LMO2P25791 158 aa11.2□□□□□ -0.62
HLCS-202ENST00000399120 MAP2K3P46734 347 aa11.2□□□□□ -0.62
HLCS-202ENST00000399120 RAB31Q13636 194 aa11.2□□□□□ -0.62
HLCS-202ENST00000399120 GINS1Q14691 196 aa11.2□□□□□ -0.62
HLCS-202ENST00000399120 PRRT3Q5FWE3 981 aa11.2□□□□□ -0.62
HLCS-202ENST00000399120 DRICH1Q6PGQ1 229 aaPredicted RBP11.2□□□□□ -0.62
HLCS-202ENST00000399120 DPY19L3Q6ZPD9 716 aa11.2□□□□□ -0.62
HLCS-202ENST00000399120 OR10Q1Q8NGQ4 319 aa11.2□□□□□ -0.62
HLCS-202ENST00000399120 PAPOLGQ9BWT3 736 aaKnown RBP11.2□□□□□ -0.62
HLCS-202ENST00000399120 OR51B5Q9H339 312 aa11.2□□□□□ -0.62
HLCS-202ENST00000399120 RNF215Q9Y6U7 377 aa11.2□□□□□ -0.62
HLCS-202ENST00000399120 DLC1Q96QB1 1528 aa11.2□□□□□ -0.62
HLCS-202ENST00000399120 ARPC4-TTLL3A0A0A6YYG9 625 aa11.2□□□□□ -0.62
HLCS-202ENST00000399120 LCHNA4D1U4 455 aa11.2□□□□□ -0.62
HLCS-202ENST00000399120 YJEFN3A6XGL0 299 aa11.2□□□□□ -0.62
HLCS-202ENST00000399120 C12orf71A8MTZ7 269 aa11.2□□□□□ -0.62
HLCS-202ENST00000399120 GBAP04062 536 aa11.2□□□□□ -0.62
HLCS-202ENST00000399120 ZNF30P17039 623 aa11.2□□□□□ -0.62
HLCS-202ENST00000399120 ARL2P36404 184 aa11.2□□□□□ -0.62
HLCS-202ENST00000399120 RPS24P62847 133 aaKnown RBP11.2□□□□□ -0.62
HLCS-202ENST00000399120 ID2Q02363 134 aa11.2□□□□□ -0.62
HLCS-202ENST00000399120 FAM110CQ1W6H9 321 aa11.2□□□□□ -0.62
HLCS-202ENST00000399120 CFAP77Q6ZQR2 320 aa11.2□□□□□ -0.62
HLCS-202ENST00000399120 TMEM110Q86TL2 294 aa11.2□□□□□ -0.62
HLCS-202ENST00000399120 BBS10Q8TAM1 723 aa11.2□□□□□ -0.62
HLCS-202ENST00000399120 FRZBQ92765 325 aa11.2□□□□□ -0.62
HLCS-202ENST00000399120 FUBP3Q96I24 572 aaKnown RBP eCLIP11.2□□□□□ -0.62
HLCS-202ENST00000399120 GALPQ9UBC7 116 aa11.2□□□□□ -0.62
HLCS-202ENST00000399120 MAGED1Q9Y5V3 778 aaPredicted RBP11.2□□□□□ -0.62
HLCS-202ENST00000399120 UNC119BA6NIH7 251 aa11.2□□□□□ -0.62
HLCS-202ENST00000399120 A8MXE2 369 aa11.2□□□□□ -0.62
HLCS-202ENST00000399120 GRID2O43424 1007 aa11.2□□□□□ -0.62
HLCS-202ENST00000399120 IFNA17P01571 189 aa11.2□□□□□ -0.62
HLCS-202ENST00000399120 CELP19835 753 aa11.2□□□□□ -0.62
HLCS-202ENST00000399120 PRKACGP22612 351 aa11.2□□□□□ -0.62
HLCS-202ENST00000399120 SOX9P48436 509 aa11.2□□□□□ -0.62
HLCS-202ENST00000399120 DPYSL2Q16555 572 aa11.2□□□□□ -0.62
HLCS-202ENST00000399120 TMEM236Q5W0B7 351 aa11.2□□□□□ -0.62
HLCS-202ENST00000399120 RPL13AP3Q6NVV1 102 aa11.2□□□□□ -0.62
HLCS-202ENST00000399120 LRFN4Q6PJG9 635 aa11.2□□□□□ -0.62
HLCS-202ENST00000399120 ASCC1Q8N9N2 400 aaKnown RBP11.2□□□□□ -0.62
HLCS-202ENST00000399120 GATSQ8NAP1 163 aa11.2□□□□□ -0.62
HLCS-202ENST00000399120 OR4K14Q8NGD5 310 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms