RNA–Protein interactions for RNA: ENST00000398738.2

PTCHD4-202, Transcript of patched domain containing 4, humanhuman

TSL 1 (best)

Gene PTCHD4, Length 3,232 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-202ENST00000398738 NTMT1Q9BV86 223 aa9.45□□□□□ -0.9
PTCHD4-202ENST00000398738 ZFYVE1Q9HBF4 777 aa9.45□□□□□ -0.9
PTCHD4-202ENST00000398738 SLC23A1Q9UHI7 598 aa9.45□□□□□ -0.9
PTCHD4-202ENST00000398738 CD84Q9UIB8 345 aa9.45□□□□□ -0.9
PTCHD4-202ENST00000398738 PPP2R3BQ9Y5P8 575 aa9.45□□□□□ -0.9
PTCHD4-202ENST00000398738 CIB4A0PJX0 185 aa9.45□□□□□ -0.9
PTCHD4-202ENST00000398738 PRAMEF25A6NGN4 478 aa9.45□□□□□ -0.9
PTCHD4-202ENST00000398738 BTN3A3O00478 584 aa9.45□□□□□ -0.9
PTCHD4-202ENST00000398738 MYL12BO14950 172 aa9.45□□□□□ -0.9
PTCHD4-202ENST00000398738 PLA2G10O15496 165 aa9.45□□□□□ -0.9
PTCHD4-202ENST00000398738 OR10H3O60404 316 aa9.45□□□□□ -0.9
PTCHD4-202ENST00000398738 CSO75390 466 aaKnown RBP9.45□□□□□ -0.9
PTCHD4-202ENST00000398738 ANXA4P09525 319 aaPredicted RBP9.45□□□□□ -0.9
PTCHD4-202ENST00000398738 SLC2A2P11168 524 aaPredicted RBP9.45□□□□□ -0.9
PTCHD4-202ENST00000398738 ANXA8P13928 327 aa9.45□□□□□ -0.9
PTCHD4-202ENST00000398738 RPS26P62854 115 aaKnown RBP9.45□□□□□ -0.9
PTCHD4-202ENST00000398738 MC1RQ01726 317 aa9.45□□□□□ -0.9
PTCHD4-202ENST00000398738 NFATC2Q13469 925 aa9.45□□□□□ -0.9
PTCHD4-202ENST00000398738 LRRC32Q14392 662 aa9.45□□□□□ -0.9
PTCHD4-202ENST00000398738 P2RY14Q15391 338 aa9.45□□□□□ -0.9
PTCHD4-202ENST00000398738 RGNQ15493 299 aa9.45□□□□□ -0.9
PTCHD4-202ENST00000398738 GPR19Q15760 415 aa9.45□□□□□ -0.9
PTCHD4-202ENST00000398738 GPR162Q16538 588 aa9.45□□□□□ -0.9
PTCHD4-202ENST00000398738 IFI44LQ53G44 452 aa9.45□□□□□ -0.9
PTCHD4-202ENST00000398738 OR2G6Q5TZ20 316 aa9.45□□□□□ -0.9
PTCHD4-202ENST00000398738 ERICH5Q6P6B1 374 aa9.45□□□□□ -0.9
PTCHD4-202ENST00000398738 SZRD1Q7Z422 152 aa9.45□□□□□ -0.9
PTCHD4-202ENST00000398738 DENND6BQ8NEG7 585 aa9.45□□□□□ -0.9
PTCHD4-202ENST00000398738 OR6C4Q8NGE1 309 aa9.45□□□□□ -0.9
PTCHD4-202ENST00000398738 CDCP1Q9H5V8 836 aa9.45□□□□□ -0.9
PTCHD4-202ENST00000398738 SRA1Q9HD15 236 aaKnown RBP9.45□□□□□ -0.9
PTCHD4-202ENST00000398738 CCL15-CCL14A0A0B4J2E2 113 aa9.44□□□□□ -0.9
PTCHD4-202ENST00000398738 PRAMEF33A0A0G2JMD5 474 aa9.44□□□□□ -0.9
PTCHD4-202ENST00000398738 PRAMEF10O60809 474 aa9.44□□□□□ -0.9
PTCHD4-202ENST00000398738 MMP20O60882 483 aa9.44□□□□□ -0.9
PTCHD4-202ENST00000398738 GCM2O75603 506 aaPredicted RBP9.44□□□□□ -0.9
PTCHD4-202ENST00000398738 IL1RNP18510 177 aa9.44□□□□□ -0.9
PTCHD4-202ENST00000398738 MAPKAPK2P49137 400 aa9.44□□□□□ -0.9
PTCHD4-202ENST00000398738 RAB8AP61006 207 aa9.44□□□□□ -0.9
PTCHD4-202ENST00000398738 SELENOWP63302 87 aa9.44□□□□□ -0.9
PTCHD4-202ENST00000398738 DBPQ10586 325 aaPredicted RBP9.44□□□□□ -0.9
PTCHD4-202ENST00000398738 CCL15Q16663 113 aa9.44□□□□□ -0.9
PTCHD4-202ENST00000398738 ATAT1Q5SQI0 421 aa9.44□□□□□ -0.9
PTCHD4-202ENST00000398738 PDZD3Q86UT5 571 aa9.44□□□□□ -0.9
PTCHD4-202ENST00000398738 RNF130Q86XS8 419 aa9.44□□□□□ -0.9
PTCHD4-202ENST00000398738 TMC8Q8IU68 726 aa9.44□□□□□ -0.9
PTCHD4-202ENST00000398738 VRK3Q8IV63 474 aa9.44□□□□□ -0.9
PTCHD4-202ENST00000398738 GHDCQ8N2G8 530 aa9.44□□□□□ -0.9
PTCHD4-202ENST00000398738 Q8N402 240 aa9.44□□□□□ -0.9
PTCHD4-202ENST00000398738 SPERTQ8NA61 448 aa9.44□□□□□ -0.9
PTCHD4-202ENST00000398738 OR4M1Q8NGD0 313 aa9.44□□□□□ -0.9
PTCHD4-202ENST00000398738 ASIC4Q96FT7 647 aa9.44□□□□□ -0.9
PTCHD4-202ENST00000398738 MAGEH1Q9H213 219 aa9.44□□□□□ -0.9
PTCHD4-202ENST00000398738 PLCXD1Q9NUJ7 323 aa9.44□□□□□ -0.9
PTCHD4-202ENST00000398738 FLRT1Q9NZU1 646 aa9.44□□□□□ -0.9
PTCHD4-202ENST00000398738 FNIP2Q9P278 1114 aa9.44□□□□□ -0.9
PTCHD4-202ENST00000398738 PCDHB1Q9Y5F3 818 aa9.44□□□□□ -0.9
PTCHD4-202ENST00000398738 SNX11Q9Y5W9 270 aa9.44□□□□□ -0.9
PTCHD4-202ENST00000398738 GSAPA4D1B5 854 aa9.44□□□□□ -0.9
PTCHD4-202ENST00000398738 CCDC85CA6NKD9 419 aa9.44□□□□□ -0.9
PTCHD4-202ENST00000398738 TLX2O43763 284 aaPredicted RBP9.44□□□□□ -0.9
PTCHD4-202ENST00000398738 MRPS14O60783 128 aaKnown RBP9.44□□□□□ -0.9
PTCHD4-202ENST00000398738 HBQ1P09105 142 aa9.44□□□□□ -0.9
PTCHD4-202ENST00000398738 ATF4P18848 351 aaPredicted RBP9.44□□□□□ -0.9
PTCHD4-202ENST00000398738 EVI2BP34910 448 aa9.44□□□□□ -0.9
PTCHD4-202ENST00000398738 CHI3L1P36222 383 aaPredicted RBP9.44□□□□□ -0.9
PTCHD4-202ENST00000398738 BCL2L1Q07817 233 aa9.44□□□□□ -0.9
PTCHD4-202ENST00000398738 ABRQ12979 859 aa9.44□□□□□ -0.9
PTCHD4-202ENST00000398738 NFE2Q16621 373 aaPredicted RBP9.44□□□□□ -0.9
PTCHD4-202ENST00000398738 DUSP7Q16829 419 aa9.44□□□□□ -0.9
PTCHD4-202ENST00000398738 GDF6Q6KF10 455 aaPredicted RBP9.44□□□□□ -0.9
PTCHD4-202ENST00000398738 CMTM7Q96FZ5 175 aa9.44□□□□□ -0.9
PTCHD4-202ENST00000398738 RIPOR3Q96MK2 946 aa9.44□□□□□ -0.9
PTCHD4-202ENST00000398738 ZSCAN5AQ9BUG6 496 aa9.44□□□□□ -0.9
PTCHD4-202ENST00000398738 RACGAP1Q9H0H5 632 aa9.44□□□□□ -0.9
PTCHD4-202ENST00000398738 PPIL3Q9H2H8 161 aaKnown RBP9.44□□□□□ -0.9
PTCHD4-202ENST00000398738 MIXL1Q9H2W2 232 aa9.44□□□□□ -0.9
PTCHD4-202ENST00000398738 ASAH2Q9NR71 780 aa9.44□□□□□ -0.9
PTCHD4-202ENST00000398738 TMCC3Q9ULS5 477 aa9.44□□□□□ -0.9
PTCHD4-202ENST00000398738 TRPV2Q9Y5S1 764 aa9.44□□□□□ -0.9
PTCHD4-202ENST00000398738 ISM1B1AKI9 464 aa9.44□□□□□ -0.9
PTCHD4-202ENST00000398738 TLR4O00206 839 aa9.44□□□□□ -0.9
PTCHD4-202ENST00000398738 TSPAN4O14817 238 aa9.44□□□□□ -0.9
PTCHD4-202ENST00000398738 ACSL4O60488 711 aa9.44□□□□□ -0.9
PTCHD4-202ENST00000398738 ZNF865P0CJ78 1059 aaPredicted RBP9.44□□□□□ -0.9
PTCHD4-202ENST00000398738 TYMPP19971 482 aa9.44□□□□□ -0.9
PTCHD4-202ENST00000398738 ERP29P30040 261 aaKnown RBP9.44□□□□□ -0.9
PTCHD4-202ENST00000398738 ETV6P41212 452 aa9.44□□□□□ -0.9
PTCHD4-202ENST00000398738 SCARB2Q14108 478 aa9.44□□□□□ -0.9
PTCHD4-202ENST00000398738 INSL4Q14641 139 aa9.44□□□□□ -0.9
PTCHD4-202ENST00000398738 POU4F3Q15319 338 aa9.44□□□□□ -0.9
PTCHD4-202ENST00000398738 FRMPD2BQ6IN97 320 aa9.44□□□□□ -0.9
PTCHD4-202ENST00000398738 VN1R5Q7Z5H4 357 aa9.44□□□□□ -0.9
PTCHD4-202ENST00000398738 HJURPQ8NCD3 748 aaPredicted RBP9.44□□□□□ -0.9
PTCHD4-202ENST00000398738 VPS37AQ8NEZ2 397 aa9.44□□□□□ -0.9
PTCHD4-202ENST00000398738 SETD6Q8TBK2 473 aa9.44□□□□□ -0.9
PTCHD4-202ENST00000398738 LRRC20Q8TCA0 184 aa9.44□□□□□ -0.9
PTCHD4-202ENST00000398738 GATAD2BQ8WXI9 593 aa9.44□□□□□ -0.9
PTCHD4-202ENST00000398738 CIDECQ96AQ7 238 aaPredicted RBP9.44□□□□□ -0.9
PTCHD4-202ENST00000398738 MSANTD3Q96H12 275 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms