RNA–Protein interactions for RNA: ENST00000397511.6

SSR1-202, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 3,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-202ENST00000397511 CPN2P22792 545 aa4.82□□□□□ -1.64
SSR1-202ENST00000397511 RPS3P23396 243 aaKnown RBP eCLIP4.82□□□□□ -1.642e-20■■■□□ 18.1
SSR1-202ENST00000397511 HLA-FP30511 346 aa4.82□□□□□ -1.64
SSR1-202ENST00000397511 TNFSF8P32971 234 aa4.82□□□□□ -1.64
SSR1-202ENST00000397511 SPAM1P38567 509 aa4.82□□□□□ -1.64
SSR1-202ENST00000397511 GBX2P52951 348 aaPredicted RBP4.82□□□□□ -1.64
SSR1-202ENST00000397511 PER3P56645 1201 aa4.82□□□□□ -1.64
SSR1-202ENST00000397511 ERVK-21P61565 698 aa4.82□□□□□ -1.64
SSR1-202ENST00000397511 HTRA3P83110 453 aa4.82□□□□□ -1.64
SSR1-202ENST00000397511 VLDLRP98155 873 aa4.82□□□□□ -1.64
SSR1-202ENST00000397511 RIPPLY1Q0D2K3 151 aa4.82□□□□□ -1.64
SSR1-202ENST00000397511 CHIT1Q13231 466 aa4.82□□□□□ -1.64
SSR1-202ENST00000397511 ASAH1Q13510 395 aa4.82□□□□□ -1.64
SSR1-202ENST00000397511 TIGD6Q17RP2 521 aa4.82□□□□□ -1.64
SSR1-202ENST00000397511 XKR6Q5GH73 641 aa4.82□□□□□ -1.64
SSR1-202ENST00000397511 GPR153Q6NV75 609 aa4.82□□□□□ -1.64
SSR1-202ENST00000397511 CFAP77Q6ZQR2 320 aa4.82□□□□□ -1.64
SSR1-202ENST00000397511 Q6ZVL8 140 aa4.82□□□□□ -1.64
SSR1-202ENST00000397511 GAREM2Q75VX8 874 aa4.82□□□□□ -1.64
SSR1-202ENST00000397511 GPAT4Q86UL3 456 aa4.82□□□□□ -1.64
SSR1-202ENST00000397511 ADGRG3Q86Y34 549 aa4.82□□□□□ -1.64
SSR1-202ENST00000397511 HIPK1Q86Z02 1210 aa4.82□□□□□ -1.64
SSR1-202ENST00000397511 SYT12Q8IV01 421 aa4.82□□□□□ -1.64
SSR1-202ENST00000397511 PM20D2Q8IYS1 436 aa4.82□□□□□ -1.64
SSR1-202ENST00000397511 NXPE1Q8N323 547 aa4.82□□□□□ -1.64
SSR1-202ENST00000397511 AADATQ8N5Z0 425 aa4.82□□□□□ -1.64
SSR1-202ENST00000397511 DPP10Q8N608 796 aa4.82□□□□□ -1.64
SSR1-202ENST00000397511 SLAIN1Q8ND83 568 aa4.82□□□□□ -1.64
SSR1-202ENST00000397511 SLC22A8Q8TCC7 542 aa4.82□□□□□ -1.64
SSR1-202ENST00000397511 CYB5D2Q8WUJ1 264 aa4.82□□□□□ -1.64
SSR1-202ENST00000397511 ST8SIA4Q92187 359 aa4.82□□□□□ -1.64
SSR1-202ENST00000397511 IGSF21Q96ID5 467 aa4.82□□□□□ -1.64
SSR1-202ENST00000397511 Q96MT0 163 aa4.82□□□□□ -1.64
SSR1-202ENST00000397511 NECTIN4Q96NY8 510 aa4.82□□□□□ -1.64
SSR1-202ENST00000397511 NRTNQ99748 197 aa4.82□□□□□ -1.64
SSR1-202ENST00000397511 KCNS3Q9BQ31 491 aa4.82□□□□□ -1.64
SSR1-202ENST00000397511 C3orf14Q9HBI5 128 aa4.82□□□□□ -1.64
SSR1-202ENST00000397511 PAK6Q9NQU5 681 aaPredicted RBP4.82□□□□□ -1.64
SSR1-202ENST00000397511 SH3BP4Q9P0V3 963 aa4.82□□□□□ -1.64
SSR1-202ENST00000397511 KIF17Q9P2E2 1029 aa4.82□□□□□ -1.64
SSR1-202ENST00000397511 CPNE7Q9UBL6 633 aa4.82□□□□□ -1.64
SSR1-202ENST00000397511 ELF5Q9UKW6 265 aaPredicted RBP4.82□□□□□ -1.64
SSR1-202ENST00000397511 MRPS7Q9Y2R9 242 aaKnown RBP4.82□□□□□ -1.64
SSR1-202ENST00000397511 PCDHB1Q9Y5F3 818 aa4.82□□□□□ -1.64
SSR1-202ENST00000397511 PCDHGB3Q9Y5G1 929 aa4.82□□□□□ -1.64
SSR1-202ENST00000397511 GMPPBQ9Y5P6 360 aa4.82□□□□□ -1.64
SSR1-202ENST00000397511 A0A075B6Q4 140 aa4.81□□□□□ -1.64
SSR1-202ENST00000397511 A0A1W2PQ09 198 aa4.81□□□□□ -1.64
SSR1-202ENST00000397511 CIB4A0PJX0 185 aa4.81□□□□□ -1.64
SSR1-202ENST00000397511 PRSS44E7EML9 344 aa4.81□□□□□ -1.64
SSR1-202ENST00000397511 FPGTO14772 594 aa4.81□□□□□ -1.64
SSR1-202ENST00000397511 YY2O15391 372 aa4.81□□□□□ -1.64
SSR1-202ENST00000397511 ZNF821O75541 412 aaPredicted RBP4.81□□□□□ -1.64
SSR1-202ENST00000397511 RFPL3O75679 317 aa4.81□□□□□ -1.64
SSR1-202ENST00000397511 RECQL5O94762 991 aaPredicted RBP4.81□□□□□ -1.64
SSR1-202ENST00000397511 WDPCPO95876 746 aa4.81□□□□□ -1.64
SSR1-202ENST00000397511 VIPP01282 170 aa4.81□□□□□ -1.64
SSR1-202ENST00000397511 IL6P05231 212 aa4.81□□□□□ -1.64
SSR1-202ENST00000397511 S100A6P06703 90 aa4.81□□□□□ -1.64
SSR1-202ENST00000397511 COX7A2P14406 83 aa4.81□□□□□ -1.64
SSR1-202ENST00000397511 HOXB3P14651 431 aaPredicted RBP4.81□□□□□ -1.64
SSR1-202ENST00000397511 ACPPP15309 386 aa4.81□□□□□ -1.64
SSR1-202ENST00000397511 ENGP17813 658 aa4.81□□□□□ -1.64
SSR1-202ENST00000397511 RAB3AP20336 220 aa4.81□□□□□ -1.64
SSR1-202ENST00000397511 CD72P21854 359 aa4.81□□□□□ -1.64
SSR1-202ENST00000397511 IGFBP5P24593 272 aa4.81□□□□□ -1.64
SSR1-202ENST00000397511 PTX3P26022 381 aaPredicted RBP4.81□□□□□ -1.64
SSR1-202ENST00000397511 SERPINA4P29622 427 aa4.81□□□□□ -1.64
SSR1-202ENST00000397511 TRIM23P36406 574 aa4.81□□□□□ -1.64
SSR1-202ENST00000397511 NUDT6P53370 316 aa4.81□□□□□ -1.64
SSR1-202ENST00000397511 RAB14P61106 215 aa4.81□□□□□ -1.64
SSR1-202ENST00000397511 HYAL2Q12891 473 aa4.81□□□□□ -1.64
SSR1-202ENST00000397511 GRIK2Q13002 908 aa4.81□□□□□ -1.64
SSR1-202ENST00000397511 KEAP1Q14145 624 aa4.81□□□□□ -1.64
SSR1-202ENST00000397511 HKDC1Q2TB90 917 aa4.81□□□□□ -1.64
SSR1-202ENST00000397511 RUNDC3AQ59EK9 446 aa4.81□□□□□ -1.64
SSR1-202ENST00000397511 LAIR1Q6GTX8 287 aa4.81□□□□□ -1.64
SSR1-202ENST00000397511 LAMTOR1Q6IAA8 161 aa4.81□□□□□ -1.64
SSR1-202ENST00000397511 PLET1Q6UQ28 207 aa4.81□□□□□ -1.64
SSR1-202ENST00000397511 TEX261Q6UWH6 196 aa4.81□□□□□ -1.64
SSR1-202ENST00000397511 PAMR1Q6UXH9 720 aa4.81□□□□□ -1.64
SSR1-202ENST00000397511 CERS6Q6ZMG9 384 aa4.81□□□□□ -1.64
SSR1-202ENST00000397511 TMPRSS11AQ6ZMR5 421 aa4.81□□□□□ -1.64
SSR1-202ENST00000397511 AHSA2Q719I0 299 aa4.81□□□□□ -1.64
SSR1-202ENST00000397511 SLC46A3Q7Z3Q1 461 aa4.81□□□□□ -1.64
SSR1-202ENST00000397511 LILRB2Q8N423 598 aa4.81□□□□□ -1.64
SSR1-202ENST00000397511 ARL6IP6Q8N6S5 226 aa4.81□□□□□ -1.64
SSR1-202ENST00000397511 GDPD1Q8N9F7 314 aa4.81□□□□□ -1.64
SSR1-202ENST00000397511 ZNF680Q8NEM1 530 aa4.81□□□□□ -1.64
SSR1-202ENST00000397511 OR4K1Q8NGD4 311 aa4.81□□□□□ -1.64
SSR1-202ENST00000397511 OR8K3Q8NH51 312 aa4.81□□□□□ -1.64
SSR1-202ENST00000397511 OR5AK3PQ8NH89 298 aa4.81□□□□□ -1.64
SSR1-202ENST00000397511 UFD1Q92890 307 aa4.81□□□□□ -1.64
SSR1-202ENST00000397511 DEFB118Q96PH6 123 aa4.81□□□□□ -1.64
SSR1-202ENST00000397511 CLMPQ9H6B4 373 aa4.81□□□□□ -1.64
SSR1-202ENST00000397511 TRIM45Q9H8W5 580 aaPredicted RBP4.81□□□□□ -1.64
SSR1-202ENST00000397511 SMURF1Q9HCE7 757 aa4.81□□□□□ -1.64
SSR1-202ENST00000397511 HMX1Q9NP08 348 aaPredicted RBP4.81□□□□□ -1.64
SSR1-202ENST00000397511 ASAH2Q9NR71 780 aa4.81□□□□□ -1.64
SSR1-202ENST00000397511 SRRDQ9UH36 339 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms