RNA–Protein interactions for RNA: ENST00000397477.2

CPSF1P1-201, Transcript of cleavage and polyadenylation specific factor 1 pseudogene 1, humanhuman

BASIC

Gene CPSF1P1, Length 3,730 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1P1-201ENST00000397477 OR4N5Q8IXE1 308 aa9.96□□□□□ -0.82
CPSF1P1-201ENST00000397477 OR8H2Q8N162 312 aa9.96□□□□□ -0.82
CPSF1P1-201ENST00000397477 HORMAD2Q8N7B1 307 aa9.96□□□□□ -0.82
CPSF1P1-201ENST00000397477 POC5Q8NA72 575 aa9.96□□□□□ -0.82
CPSF1P1-201ENST00000397477 SLC9A6Q92581 669 aa9.96□□□□□ -0.82
CPSF1P1-201ENST00000397477 FCRL4Q96PJ5 515 aa9.96□□□□□ -0.82
CPSF1P1-201ENST00000397477 ZDHHC5Q9C0B5 715 aa9.96□□□□□ -0.82
CPSF1P1-201ENST00000397477 CACYBPQ9HB71 228 aaKnown RBP9.96□□□□□ -0.82
CPSF1P1-201ENST00000397477 IL20RAQ9UHF4 553 aa9.96□□□□□ -0.82
CPSF1P1-201ENST00000397477 UGDHO60701 494 aa9.95□□□□□ -0.82
CPSF1P1-201ENST00000397477 GADD45AP24522 165 aa9.95□□□□□ -0.82
CPSF1P1-201ENST00000397477 CXCR2P25025 360 aa9.95□□□□□ -0.82
CPSF1P1-201ENST00000397477 ITGB7P26010 798 aa9.95□□□□□ -0.82
CPSF1P1-201ENST00000397477 MRPL19P49406 292 aaKnown RBP9.95□□□□□ -0.82
CPSF1P1-201ENST00000397477 EIF2B2P49770 351 aaKnown RBP9.95□□□□□ -0.82
CPSF1P1-201ENST00000397477 ITGA1P56199 1179 aa9.95□□□□□ -0.82
CPSF1P1-201ENST00000397477 KCNJ10P78508 379 aa9.95□□□□□ -0.82
CPSF1P1-201ENST00000397477 KDM4DQ6B0I6 523 aa9.95□□□□□ -0.82
CPSF1P1-201ENST00000397477 LAIR1Q6GTX8 287 aa9.95□□□□□ -0.82
CPSF1P1-201ENST00000397477 MTSS1LQ765P7 747 aa9.95□□□□□ -0.82
CPSF1P1-201ENST00000397477 ZNF554Q86TJ5 538 aa9.95□□□□□ -0.82
CPSF1P1-201ENST00000397477 ENTHD1Q8IYW4 607 aa9.95□□□□□ -0.82
CPSF1P1-201ENST00000397477 OR52N2Q8NGI0 321 aa9.95□□□□□ -0.82
CPSF1P1-201ENST00000397477 SMARCD2Q92925 531 aa9.95□□□□□ -0.82
CPSF1P1-201ENST00000397477 OTUB2Q96DC9 234 aa9.95□□□□□ -0.82
CPSF1P1-201ENST00000397477 ARSGQ96EG1 525 aa9.95□□□□□ -0.82
CPSF1P1-201ENST00000397477 ZNF300Q96RE9 604 aaPredicted RBP9.95□□□□□ -0.82
CPSF1P1-201ENST00000397477 PHOX2BQ99453 314 aa9.95□□□□□ -0.82
CPSF1P1-201ENST00000397477 TUBA1CQ9BQE3 449 aa9.95□□□□□ -0.82
CPSF1P1-201ENST00000397477 FNDC11Q9BVV2 318 aa9.95□□□□□ -0.82
CPSF1P1-201ENST00000397477 BRF2Q9HAW0 419 aa9.95□□□□□ -0.82
CPSF1P1-201ENST00000397477 CLN6Q9NWW5 311 aa9.95□□□□□ -0.82
CPSF1P1-201ENST00000397477 TMEM9Q9P0T7 183 aa9.95□□□□□ -0.82
CPSF1P1-201ENST00000397477 SLC6A14Q9UN76 642 aa9.95□□□□□ -0.82
CPSF1P1-201ENST00000397477 LYVE1Q9Y5Y7 322 aa9.95□□□□□ -0.82
CPSF1P1-201ENST00000397477 GSAPA4D1B5 854 aa9.95□□□□□ -0.82
CPSF1P1-201ENST00000397477 SRPRAP08240 638 aaKnown RBP9.95□□□□□ -0.82
CPSF1P1-201ENST00000397477 CDH3P22223 829 aa9.95□□□□□ -0.82
CPSF1P1-201ENST00000397477 CNR2P34972 360 aa9.95□□□□□ -0.82
CPSF1P1-201ENST00000397477 GZMMP51124 257 aa9.95□□□□□ -0.82
CPSF1P1-201ENST00000397477 CLDN2P57739 230 aa9.95□□□□□ -0.82
CPSF1P1-201ENST00000397477 MTAPQ13126 283 aa9.95□□□□□ -0.82
CPSF1P1-201ENST00000397477 LRRC32Q14392 662 aa9.95□□□□□ -0.82
CPSF1P1-201ENST00000397477 ZNF846Q147U1 533 aa9.95□□□□□ -0.82
CPSF1P1-201ENST00000397477 SYPL1Q16563 259 aa9.95□□□□□ -0.82
CPSF1P1-201ENST00000397477 WSCD2Q2TBF2 565 aa9.95□□□□□ -0.82
CPSF1P1-201ENST00000397477 REEP3Q6NUK4 255 aa9.95□□□□□ -0.82
CPSF1P1-201ENST00000397477 NUDT18Q6ZVK8 323 aa9.95□□□□□ -0.82
CPSF1P1-201ENST00000397477 NEK10Q6ZWH5 1172 aa9.95□□□□□ -0.82
CPSF1P1-201ENST00000397477 TSPYL5Q86VY4 417 aaPredicted RBP9.95□□□□□ -0.82
CPSF1P1-201ENST00000397477 AMER3Q8N944 861 aa9.95□□□□□ -0.82
CPSF1P1-201ENST00000397477 GEMIN6Q8WXD5 167 aaKnown RBP9.95□□□□□ -0.82
CPSF1P1-201ENST00000397477 LRIG1Q96JA1 1093 aa9.95□□□□□ -0.82
CPSF1P1-201ENST00000397477 ZNF514Q96K75 400 aaPredicted RBP9.95□□□□□ -0.82
CPSF1P1-201ENST00000397477 LMLNQ96KR4 655 aa9.95□□□□□ -0.82
CPSF1P1-201ENST00000397477 Q96MT0 163 aa9.95□□□□□ -0.82
CPSF1P1-201ENST00000397477 NUAK2Q9H093 628 aa9.95□□□□□ -0.82
CPSF1P1-201ENST00000397477 OR51E2Q9H255 320 aa9.95□□□□□ -0.82
CPSF1P1-201ENST00000397477 EHD1Q9H4M9 534 aa9.95□□□□□ -0.82
CPSF1P1-201ENST00000397477 BTNL2Q9UIR0 455 aa9.95□□□□□ -0.82
CPSF1P1-201ENST00000397477 ENTPD4Q9Y227 616 aa9.95□□□□□ -0.82
CPSF1P1-201ENST00000397477 PLPP1O14494 284 aa9.95□□□□□ -0.82
CPSF1P1-201ENST00000397477 ANXA8P13928 327 aa9.95□□□□□ -0.82
CPSF1P1-201ENST00000397477 HSD3B1P14060 373 aa9.95□□□□□ -0.82
CPSF1P1-201ENST00000397477 DDX5P17844 614 aaKnown RBP9.95□□□□□ -0.82
CPSF1P1-201ENST00000397477 HSD3B2P26439 372 aa9.95□□□□□ -0.82
CPSF1P1-201ENST00000397477 NTSP30990 170 aa9.95□□□□□ -0.82
CPSF1P1-201ENST00000397477 RPL3P39023 403 aaKnown RBP9.95□□□□□ -0.82
CPSF1P1-201ENST00000397477 AVPR1BP47901 424 aa9.95□□□□□ -0.82
CPSF1P1-201ENST00000397477 UBE3AQ05086 875 aa9.95□□□□□ -0.82
CPSF1P1-201ENST00000397477 SLC13A2Q13183 592 aa9.95□□□□□ -0.82
CPSF1P1-201ENST00000397477 TUBA3CQ13748 450 aa9.95□□□□□ -0.82
CPSF1P1-201ENST00000397477 TSTQ16762 297 aaKnown RBP9.95□□□□□ -0.82
CPSF1P1-201ENST00000397477 KHDRBS2Q5VWX1 349 aaKnown RBP9.95□□□□□ -0.82
CPSF1P1-201ENST00000397477 NUDT13Q86X67 352 aa9.95□□□□□ -0.82
CPSF1P1-201ENST00000397477 GALNT13Q8IUC8 556 aa9.95□□□□□ -0.82
CPSF1P1-201ENST00000397477 SYNPOQ8N3V7 929 aa9.95□□□□□ -0.82
CPSF1P1-201ENST00000397477 TCEANCQ8N8B7 351 aa9.95□□□□□ -0.82
CPSF1P1-201ENST00000397477 PUM2Q8TB72 1066 aaKnown RBP eCLIP9.95□□□□□ -0.82
CPSF1P1-201ENST00000397477 SMPDL3AQ92484 453 aa9.95□□□□□ -0.82
CPSF1P1-201ENST00000397477 KAT2AQ92830 837 aa9.95□□□□□ -0.82
CPSF1P1-201ENST00000397477 MUL1Q969V5 352 aa9.95□□□□□ -0.82
CPSF1P1-201ENST00000397477 CNPPD1Q9BV87 410 aa9.95□□□□□ -0.82
CPSF1P1-201ENST00000397477 BHLHE41Q9C0J9 482 aaPredicted RBP9.95□□□□□ -0.82
CPSF1P1-201ENST00000397477 POLR2J3Q9H1A7 115 aaKnown RBP9.95□□□□□ -0.82
CPSF1P1-201ENST00000397477 CCNB1IP1Q9NPC3 277 aa9.95□□□□□ -0.82
CPSF1P1-201ENST00000397477 ACOT13Q9NPJ3 140 aa9.95□□□□□ -0.82
CPSF1P1-201ENST00000397477 PHPT1Q9NRX4 125 aaPredicted RBP9.95□□□□□ -0.82
CPSF1P1-201ENST00000397477 ENPP5Q9UJA9 477 aa9.95□□□□□ -0.82
CPSF1P1-201ENST00000397477 RBMX2Q9Y388 322 aaKnown RBP9.95□□□□□ -0.82
CPSF1P1-201ENST00000397477 TRPM6Q9BX84 2022 aa9.94□□□□□ -0.82
CPSF1P1-201ENST00000397477 PSMD11O00231 422 aa9.94□□□□□ -0.82
CPSF1P1-201ENST00000397477 RNASET2O00584 256 aaKnown RBP9.94□□□□□ -0.82
CPSF1P1-201ENST00000397477 UGT2B17O75795 530 aa9.94□□□□□ -0.82
CPSF1P1-201ENST00000397477 HOXB3P14651 431 aaPredicted RBP9.94□□□□□ -0.82
CPSF1P1-201ENST00000397477 GTF2E2P29084 291 aaKnown RBP9.94□□□□□ -0.82
CPSF1P1-201ENST00000397477 DCDC1P59894 354 aa9.94□□□□□ -0.82
CPSF1P1-201ENST00000397477 CDK3Q00526 305 aa9.94□□□□□ -0.82
CPSF1P1-201ENST00000397477 VEZF1Q14119 521 aa9.94□□□□□ -0.82
CPSF1P1-201ENST00000397477 CCDC85BQ15834 202 aaPredicted RBP9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 123.8 ms