RNA–Protein interactions for RNA: ENST00000397443.6

CPNE1-204, Transcript of copine 1, humanhuman

APPRIS P1 TSL 5

Gene CPNE1, Length 1,928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-204ENST00000397443 GARNL3Q5VVW2 1013 aa20.03■□□□□ 0.8
CPNE1-204ENST00000397443 KIAA2013Q8IYS2 634 aa20.03■□□□□ 0.8
CPNE1-204ENST00000397443 DEFB107AQ8IZN7 70 aa20.03■□□□□ 0.8
CPNE1-204ENST00000397443 CLECL1Q8IZS7 167 aa20.03■□□□□ 0.8
CPNE1-204ENST00000397443 PCYOX1LQ8NBM8 494 aa20.03■□□□□ 0.8
CPNE1-204ENST00000397443 AGBL5Q8NDL9 886 aa20.03■□□□□ 0.8
CPNE1-204ENST00000397443 INPP5KQ9BT40 448 aa20.03■□□□□ 0.8
CPNE1-204ENST00000397443 KCMF1Q9P0J7 381 aa20.03■□□□□ 0.8
CPNE1-204ENST00000397443 RARRES3Q9UL19 164 aa20.03■□□□□ 0.8
CPNE1-204ENST00000397443 TMEM184BQ9Y519 407 aaPredicted RBP20.03■□□□□ 0.8
CPNE1-204ENST00000397443 DYTNA2CJ06 578 aa20.02■□□□□ 0.8
CPNE1-204ENST00000397443 FAM227AF5H4B4 570 aa20.02■□□□□ 0.8
CPNE1-204ENST00000397443 ERAL1O75616 437 aaKnown RBP20.02■□□□□ 0.8
CPNE1-204ENST00000397443 TIAF1O95411 115 aa20.02■□□□□ 0.8
CPNE1-204ENST00000397443 CPSF4O95639 269 aaKnown RBP20.02■□□□□ 0.8
CPNE1-204ENST00000397443 MSL3P1P0C860 447 aa20.02■□□□□ 0.8
CPNE1-204ENST00000397443 CCL4P13236 92 aa20.02■□□□□ 0.8
CPNE1-204ENST00000397443 RPL3P39023 403 aaKnown RBP20.02■□□□□ 0.8
CPNE1-204ENST00000397443 OR1D4P47884 311 aa20.02■□□□□ 0.8
CPNE1-204ENST00000397443 AVPR1BP47901 424 aa20.02■□□□□ 0.8
CPNE1-204ENST00000397443 WNT3P56703 355 aa20.02■□□□□ 0.8
CPNE1-204ENST00000397443 ACTN3Q08043 901 aaPredicted RBP20.02■□□□□ 0.8
CPNE1-204ENST00000397443 PDE7AQ13946 482 aa20.02■□□□□ 0.8
CPNE1-204ENST00000397443 FAM53BQ14153 422 aa20.02■□□□□ 0.8
CPNE1-204ENST00000397443 TLDC1Q6P9B6 456 aa20.02■□□□□ 0.8
CPNE1-204ENST00000397443 TMEM126BQ8IUX1 230 aa20.02■□□□□ 0.8
CPNE1-204ENST00000397443 CA13Q8N1Q1 262 aa20.02■□□□□ 0.8
CPNE1-204ENST00000397443 OR8J2Q8NGG1 315 aa20.02■□□□□ 0.8
CPNE1-204ENST00000397443 MIEF2Q96C03 454 aa20.02■□□□□ 0.8
CPNE1-204ENST00000397443 TRIM8Q9BZR9 551 aa20.02■□□□□ 0.8
CPNE1-204ENST00000397443 LRMDAQ9H2I8 198 aa20.02■□□□□ 0.8
CPNE1-204ENST00000397443 WDR41Q9HAD4 459 aa20.02■□□□□ 0.8
CPNE1-204ENST00000397443 SIDT1Q9NXL6 827 aaKnown RBP20.02■□□□□ 0.8
CPNE1-204ENST00000397443 UTS2RQ9UKP6 389 aa20.02■□□□□ 0.8
CPNE1-204ENST00000397443 MAPRE3Q9UPY8 281 aa20.02■□□□□ 0.8
CPNE1-204ENST00000397443 WDFY3Q8IZQ1 3526 aa20.02■□□□□ 0.8
CPNE1-204ENST00000397443 SPAARA0A1B0GVQ0 90 aa20.02■□□□□ 0.79
CPNE1-204ENST00000397443 CHST10O43529 356 aa20.02■□□□□ 0.79
CPNE1-204ENST00000397443 GSNP06396 782 aa20.02■□□□□ 0.79
CPNE1-204ENST00000397443 ABCB1P08183 1280 aaPredicted RBP20.02■□□□□ 0.79
CPNE1-204ENST00000397443 NR2F6P10588 404 aa20.02■□□□□ 0.79
CPNE1-204ENST00000397443 BUD31P41223 144 aaPredicted RBP20.02■□□□□ 0.79
CPNE1-204ENST00000397443 GSTM5P46439 218 aa20.02■□□□□ 0.79
CPNE1-204ENST00000397443 SIM1P81133 766 aaPredicted RBP20.02■□□□□ 0.79
CPNE1-204ENST00000397443 E2F1Q01094 437 aa20.02■□□□□ 0.79
CPNE1-204ENST00000397443 MPEG1Q2M385 716 aa20.02■□□□□ 0.79
CPNE1-204ENST00000397443 ZDHHC19Q8WVZ1 309 aaPredicted RBP20.02■□□□□ 0.79
CPNE1-204ENST00000397443 GTF2H4Q92759 462 aa20.02■□□□□ 0.79
CPNE1-204ENST00000397443 COQ8BQ96D53 544 aa20.02■□□□□ 0.79
CPNE1-204ENST00000397443 YIPF2Q9BWQ6 316 aa20.02■□□□□ 0.79
CPNE1-204ENST00000397443 ATAD3AQ9NVI7 634 aa20.02■□□□□ 0.79
CPNE1-204ENST00000397443 PHF11Q9UIL8 331 aa20.02■□□□□ 0.79
CPNE1-204ENST00000397443 WBP11Q9Y2W2 641 aaKnown RBP20.02■□□□□ 0.79
CPNE1-204ENST00000397443 PCDHA9Q9Y5H5 950 aa20.02■□□□□ 0.79
CPNE1-204ENST00000397443 NSA2O95478 260 aaKnown RBP20.01■□□□□ 0.79
CPNE1-204ENST00000397443 C8orf89P0DMQ9 161 aa20.01■□□□□ 0.79
CPNE1-204ENST00000397443 DRD2P14416 443 aa20.01■□□□□ 0.79
CPNE1-204ENST00000397443 TNFRSF17Q02223 184 aa20.01■□□□□ 0.79
CPNE1-204ENST00000397443 ILKQ13418 452 aa20.01■□□□□ 0.79
CPNE1-204ENST00000397443 PWWP2BQ6NUJ5 590 aa20.01■□□□□ 0.79
CPNE1-204ENST00000397443 ASRGL1Q7L266 308 aa20.01■□□□□ 0.79
CPNE1-204ENST00000397443 DHDDSQ86SQ9 333 aa20.01■□□□□ 0.79
CPNE1-204ENST00000397443 MTERF3Q96E29 417 aa20.01■□□□□ 0.79
CPNE1-204ENST00000397443 PEX11GQ96HA9 241 aa20.01■□□□□ 0.79
CPNE1-204ENST00000397443 RMND5AQ9H871 391 aa20.01■□□□□ 0.79
CPNE1-204ENST00000397443 PACSIN3Q9UKS6 424 aa20.01■□□□□ 0.79
CPNE1-204ENST00000397443 CEP250Q9BV73 2442 aa20.01■□□□□ 0.79
CPNE1-204ENST00000397443 KNTC1P50748 2209 aa20.01■□□□□ 0.79
CPNE1-204ENST00000397443 C1orf226A1L170 272 aa20■□□□□ 0.79
CPNE1-204ENST00000397443 CDKN2CP42773 168 aa20■□□□□ 0.79
CPNE1-204ENST00000397443 SKP1P63208 163 aa20■□□□□ 0.79
CPNE1-204ENST00000397443 KCNJ2P63252 427 aa20■□□□□ 0.79
CPNE1-204ENST00000397443 ZNF750Q32MQ0 723 aa20■□□□□ 0.79
CPNE1-204ENST00000397443 SLCO6A1Q86UG4 719 aa20■□□□□ 0.79
CPNE1-204ENST00000397443 PPP1R3BQ86XI6 285 aa20■□□□□ 0.79
CPNE1-204ENST00000397443 OR4N5Q8IXE1 308 aa20■□□□□ 0.79
CPNE1-204ENST00000397443 DNAJB14Q8TBM8 379 aa20■□□□□ 0.79
CPNE1-204ENST00000397443 THTPAQ9BU02 230 aa20■□□□□ 0.79
CPNE1-204ENST00000397443 CADM1Q9BY67 442 aaKnown RBP20■□□□□ 0.79
CPNE1-204ENST00000397443 BHLHE41Q9C0J9 482 aaPredicted RBP20■□□□□ 0.79
CPNE1-204ENST00000397443 RPF2Q9H7B2 306 aaKnown RBP20■□□□□ 0.79
CPNE1-204ENST00000397443 ACTR5Q9H9F9 607 aaPredicted RBP20■□□□□ 0.79
CPNE1-204ENST00000397443 LYRM4Q9HD34 91 aa20■□□□□ 0.79
CPNE1-204ENST00000397443 SLC6A13Q9NSD5 602 aa20■□□□□ 0.79
CPNE1-204ENST00000397443 SPACA6W5XKT8 324 aa20■□□□□ 0.79
CPNE1-204ENST00000397443 COL27A1Q8IZC6 1860 aaPredicted RBP20■□□□□ 0.79
CPNE1-204ENST00000397443 MYOCOSA0A1B0GUC4 107 aa20■□□□□ 0.79
CPNE1-204ENST00000397443 A0A1W2PS29 197 aa20■□□□□ 0.79
CPNE1-204ENST00000397443 SCN2BO60939 215 aa20■□□□□ 0.79
CPNE1-204ENST00000397443 SCRG1O75711 98 aa20■□□□□ 0.79
CPNE1-204ENST00000397443 CDC123O75794 336 aaPredicted RBP20■□□□□ 0.79
CPNE1-204ENST00000397443 NTRK1P04629 796 aa20■□□□□ 0.79
CPNE1-204ENST00000397443 TLX1P31314 330 aaPredicted RBP20■□□□□ 0.79
CPNE1-204ENST00000397443 PTGER1P34995 402 aa20■□□□□ 0.79
CPNE1-204ENST00000397443 HNRNPFP52597 415 aaKnown RBP20■□□□□ 0.79
CPNE1-204ENST00000397443 ERV3-1Q14264 604 aa20■□□□□ 0.79
CPNE1-204ENST00000397443 GTDC1Q4AE62 458 aa20■□□□□ 0.79
CPNE1-204ENST00000397443 C16orf89Q6UX73 402 aa20■□□□□ 0.79
CPNE1-204ENST00000397443 CAMKMTQ7Z624 323 aa20■□□□□ 0.79
CPNE1-204ENST00000397443 TMEM52Q8NDY8 209 aa20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms