RNA–Protein interactions for RNA: ENST00000397397.6

TSPAN4-203, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,423 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-203ENST00000397397 CT55Q8WUE5 264 aa22.26■■□□□ 1.15
TSPAN4-203ENST00000397397 TBC1D20Q96BZ9 403 aa22.26■■□□□ 1.15
TSPAN4-203ENST00000397397 EGLN2Q96KS0 407 aa22.26■■□□□ 1.15
TSPAN4-203ENST00000397397 CATSPER2Q96P56 530 aa22.26■■□□□ 1.15
TSPAN4-203ENST00000397397 FAIM2Q9BWQ8 316 aa22.26■■□□□ 1.15
TSPAN4-203ENST00000397397 AIG1Q9NVV5 245 aa22.26■■□□□ 1.15
TSPAN4-203ENST00000397397 CYR61O00622 381 aa22.25■■□□□ 1.15
TSPAN4-203ENST00000397397 AIFM1O95831 613 aa22.25■■□□□ 1.15
TSPAN4-203ENST00000397397 FAM107AO95990 144 aa22.25■■□□□ 1.15
TSPAN4-203ENST00000397397 ALBP02768 609 aa22.25■■□□□ 1.15
TSPAN4-203ENST00000397397 FHP07954 510 aa22.25■■□□□ 1.15
TSPAN4-203ENST00000397397 NR2F6P10588 404 aa22.25■■□□□ 1.15
TSPAN4-203ENST00000397397 IL10P22301 178 aa22.25■■□□□ 1.15
TSPAN4-203ENST00000397397 ASMTP46597 345 aa22.25■■□□□ 1.15
TSPAN4-203ENST00000397397 KLC1Q07866 573 aa22.25■■□□□ 1.15
TSPAN4-203ENST00000397397 C2orf80Q0P641 193 aa22.25■■□□□ 1.15
TSPAN4-203ENST00000397397 VWA2Q5GFL6 755 aa22.25■■□□□ 1.15
TSPAN4-203ENST00000397397 NDUFAF5Q5TEU4 345 aa22.25■■□□□ 1.15
TSPAN4-203ENST00000397397 STT3BQ8TCJ2 826 aa22.25■■□□□ 1.15
TSPAN4-203ENST00000397397 OR1F2PQ96R84 312 aa22.25■■□□□ 1.15
TSPAN4-203ENST00000397397 WDR41Q9HAD4 459 aa22.25■■□□□ 1.15
TSPAN4-203ENST00000397397 TRIM33Q9UPN9 1127 aa22.25■■□□□ 1.15
TSPAN4-203ENST00000397397 WBP11Q9Y2W2 641 aaKnown RBP22.25■■□□□ 1.15
TSPAN4-203ENST00000397397 IGLV3-12A0A075B6K2 115 aa22.24■■□□□ 1.15
TSPAN4-203ENST00000397397 B4GALT2O60909 372 aa22.24■■□□□ 1.15
TSPAN4-203ENST00000397397 JRKO75564 520 aa22.24■■□□□ 1.15
TSPAN4-203ENST00000397397 PRKRAO75569 313 aaKnown RBP22.24■■□□□ 1.15
TSPAN4-203ENST00000397397 BMP10O95393 424 aa22.24■■□□□ 1.15
TSPAN4-203ENST00000397397 LIPCP11150 499 aa22.24■■□□□ 1.15
TSPAN4-203ENST00000397397 IDO1P14902 403 aa22.24■■□□□ 1.15
TSPAN4-203ENST00000397397 NCF2P19878 526 aaPredicted RBP22.24■■□□□ 1.15
TSPAN4-203ENST00000397397 TCN2P20062 427 aa22.24■■□□□ 1.15
TSPAN4-203ENST00000397397 STAT5AP42229 794 aa22.24■■□□□ 1.15
TSPAN4-203ENST00000397397 PTGR1Q14914 329 aa22.24■■□□□ 1.15
TSPAN4-203ENST00000397397 NCF4Q15080 339 aa22.24■■□□□ 1.15
TSPAN4-203ENST00000397397 RPS6KA2Q15349 733 aa22.24■■□□□ 1.15
TSPAN4-203ENST00000397397 NKG7Q16617 165 aa22.24■■□□□ 1.15
TSPAN4-203ENST00000397397 GSTA3Q16772 222 aa22.24■■□□□ 1.15
TSPAN4-203ENST00000397397 MFSD4BQ5TF39 518 aa22.24■■□□□ 1.15
TSPAN4-203ENST00000397397 FAM71E1Q6IPT2 247 aa22.24■■□□□ 1.15
TSPAN4-203ENST00000397397 MRPL14Q6P1L8 145 aaKnown RBP22.24■■□□□ 1.15
TSPAN4-203ENST00000397397 PIGWQ7Z7B1 504 aa22.24■■□□□ 1.15
TSPAN4-203ENST00000397397 DTX1Q86Y01 620 aa22.24■■□□□ 1.15
TSPAN4-203ENST00000397397 PRSS58Q8IYP2 241 aa22.24■■□□□ 1.15
TSPAN4-203ENST00000397397 MMP21Q8N119 569 aa22.24■■□□□ 1.15
TSPAN4-203ENST00000397397 PUM2Q8TB72 1066 aaKnown RBP eCLIP22.24■■□□□ 1.15
TSPAN4-203ENST00000397397 NKD1Q969G9 470 aa22.24■■□□□ 1.15
TSPAN4-203ENST00000397397 GFM2Q969S9 779 aaKnown RBP22.24■■□□□ 1.15
TSPAN4-203ENST00000397397 MIEF2Q96C03 454 aa22.24■■□□□ 1.15
TSPAN4-203ENST00000397397 TGIF2Q9GZN2 237 aa22.24■■□□□ 1.15
TSPAN4-203ENST00000397397 SLC26A1Q9H2B4 701 aa22.24■■□□□ 1.15
TSPAN4-203ENST00000397397 C14orf105Q9NVL8 296 aa22.24■■□□□ 1.15
TSPAN4-203ENST00000397397 MRPS33Q9Y291 106 aaKnown RBP22.24■■□□□ 1.15
TSPAN4-203ENST00000397397 GPR45Q9Y5Y3 372 aa22.24■■□□□ 1.15
TSPAN4-203ENST00000397397 AKAP13Q12802 2813 aa22.24■■□□□ 1.15
TSPAN4-203ENST00000397397 FRYQ5TBA9 3013 aa22.24■■□□□ 1.15
TSPAN4-203ENST00000397397 NUP210LQ5VU65 1888 aa22.24■■□□□ 1.15
TSPAN4-203ENST00000397397 AKAP10O43572 662 aa22.23■■□□□ 1.15
TSPAN4-203ENST00000397397 CNOT3O75175 753 aaKnown RBP22.23■■□□□ 1.15
TSPAN4-203ENST00000397397 CDC123O75794 336 aaPredicted RBP22.23■■□□□ 1.15
TSPAN4-203ENST00000397397 LRATO95237 230 aa22.23■■□□□ 1.15
TSPAN4-203ENST00000397397 ZGLP1P0C6A0 271 aa22.23■■□□□ 1.15
TSPAN4-203ENST00000397397 ALDH9A1P49189 494 aa22.23■■□□□ 1.15
TSPAN4-203ENST00000397397 MC1RQ01726 317 aa22.23■■□□□ 1.15
TSPAN4-203ENST00000397397 HEPACAMQ14CZ8 416 aa22.23■■□□□ 1.15
TSPAN4-203ENST00000397397 IKBIPQ70UQ0 350 aa22.23■■□□□ 1.15
TSPAN4-203ENST00000397397 IL22RA1Q8N6P7 574 aa22.23■■□□□ 1.15
TSPAN4-203ENST00000397397 TMEM52Q8NDY8 209 aa22.23■■□□□ 1.15
TSPAN4-203ENST00000397397 RPF2Q9H7B2 306 aaKnown RBP22.23■■□□□ 1.15
TSPAN4-203ENST00000397397 HEY2Q9UBP5 337 aa22.23■■□□□ 1.15
TSPAN4-203ENST00000397397 CROTQ9UKG9 612 aa22.23■■□□□ 1.15
TSPAN4-203ENST00000397397 PCDHA9Q9Y5H5 950 aa22.23■■□□□ 1.15
TSPAN4-203ENST00000397397 C1orf226A1L170 272 aa22.23■■□□□ 1.15
TSPAN4-203ENST00000397397 GLOD5A6NK44 160 aa22.23■■□□□ 1.15
TSPAN4-203ENST00000397397 VSTM2BA6NLU5 285 aa22.23■■□□□ 1.15
TSPAN4-203ENST00000397397 CD63P08962 238 aa22.23■■□□□ 1.15
TSPAN4-203ENST00000397397 RAB40ALP0C0E4 278 aa22.23■■□□□ 1.15
TSPAN4-203ENST00000397397 JAK1P23458 1154 aa22.23■■□□□ 1.15
TSPAN4-203ENST00000397397 DLSTP36957 453 aa22.23■■□□□ 1.15
TSPAN4-203ENST00000397397 HNRNPFP52597 415 aaKnown RBP22.23■■□□□ 1.15
TSPAN4-203ENST00000397397 NME5P56597 212 aa22.23■■□□□ 1.15
TSPAN4-203ENST00000397397 METTL21CQ5VZV1 264 aa22.23■■□□□ 1.15
TSPAN4-203ENST00000397397 SHISA6Q6ZSJ9 500 aa22.23■■□□□ 1.15
TSPAN4-203ENST00000397397 CLNKQ7Z7G1 428 aa22.23■■□□□ 1.15
TSPAN4-203ENST00000397397 ZNF595Q8IYB9 648 aa22.23■■□□□ 1.15
TSPAN4-203ENST00000397397 FAM9CQ8IZT9 166 aa22.23■■□□□ 1.15
TSPAN4-203ENST00000397397 ENDOVQ8N8Q3 282 aaKnown RBP22.23■■□□□ 1.15
TSPAN4-203ENST00000397397 UCN3Q969E3 161 aa22.23■■□□□ 1.15
TSPAN4-203ENST00000397397 DPY30Q9C005 99 aa22.23■■□□□ 1.15
TSPAN4-203ENST00000397397 BRINP2Q9C0B6 783 aa22.23■■□□□ 1.15
TSPAN4-203ENST00000397397 SOX17Q9H6I2 414 aaPredicted RBP22.23■■□□□ 1.15
TSPAN4-203ENST00000397397 WDR54Q9H977 334 aa22.23■■□□□ 1.15
TSPAN4-203ENST00000397397 LANCL2Q9NS86 450 aa22.23■■□□□ 1.15
TSPAN4-203ENST00000397397 NXT1Q9UKK6 140 aaKnown RBP22.23■■□□□ 1.15
TSPAN4-203ENST00000397397 CCDC88CQ9P219 2028 aa22.22■■□□□ 1.15
TSPAN4-203ENST00000397397 LOC101059948A0A1B0GTJ6 334 aa22.22■■□□□ 1.15
TSPAN4-203ENST00000397397 BLACEA4D250 179 aa22.22■■□□□ 1.15
TSPAN4-203ENST00000397397 PGRMC2O15173 223 aa22.22■■□□□ 1.15
TSPAN4-203ENST00000397397 DRD2P14416 443 aa22.22■■□□□ 1.15
TSPAN4-203ENST00000397397 CLDN8P56748 225 aa22.22■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms