RNA–Protein interactions for RNA: ENST00000397378.7

NEDD9-203, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 470 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-203ENST00000397378 ADAMTS6Q9UKP5 1117 aa8.69□□□□□ -1.02
NEDD9-203ENST00000397378 CLDN16Q9Y5I7 305 aa8.69□□□□□ -1.02
NEDD9-203ENST00000397378 DSCAMO60469 2012 aa8.69□□□□□ -1.02
NEDD9-203ENST00000397378 HEATR5AQ86XA9 2040 aa8.69□□□□□ -1.02
NEDD9-203ENST00000397378 MED12LQ86YW9 2145 aa8.68□□□□□ -1.02
NEDD9-203ENST00000397378 TRGV5A0A0B4J1U4 118 aa8.68□□□□□ -1.02
NEDD9-203ENST00000397378 SH3D21A4FU49 640 aa8.68□□□□□ -1.02
NEDD9-203ENST00000397378 RNF223E7ERA6 249 aa8.68□□□□□ -1.02
NEDD9-203ENST00000397378 G3V3Y1 287 aa8.68□□□□□ -1.02
NEDD9-203ENST00000397378 CELA3AP09093 270 aa8.68□□□□□ -1.02
NEDD9-203ENST00000397378 TPSB2P20231 275 aa8.68□□□□□ -1.02
NEDD9-203ENST00000397378 CEACAM8P31997 349 aaPredicted RBP8.68□□□□□ -1.02
NEDD9-203ENST00000397378 RGS4P49798 205 aa8.68□□□□□ -1.02
NEDD9-203ENST00000397378 HK2P52789 917 aa8.68□□□□□ -1.02
NEDD9-203ENST00000397378 HSD17B7P56937 341 aa8.68□□□□□ -1.02
NEDD9-203ENST00000397378 RAB8AP61006 207 aa8.68□□□□□ -1.02
NEDD9-203ENST00000397378 SRSF2Q01130 221 aaKnown RBP8.68□□□□□ -1.02
NEDD9-203ENST00000397378 DHX9Q08211 1270 aaKnown RBP8.68□□□□□ -1.02
NEDD9-203ENST00000397378 TNK1Q13470 666 aa8.68□□□□□ -1.02
NEDD9-203ENST00000397378 TPSAB1Q15661 275 aa8.68□□□□□ -1.02
NEDD9-203ENST00000397378 ELAVL1Q15717 326 aaKnown RBP8.68□□□□□ -1.02
NEDD9-203ENST00000397378 ACKR1Q16570 336 aa8.68□□□□□ -1.02
NEDD9-203ENST00000397378 ZNF750Q32MQ0 723 aa8.68□□□□□ -1.02
NEDD9-203ENST00000397378 SEL1L2Q5TEA6 688 aa8.68□□□□□ -1.02
NEDD9-203ENST00000397378 DUPD1Q68J44 220 aa8.68□□□□□ -1.02
NEDD9-203ENST00000397378 UGT3A1Q6NUS8 523 aa8.68□□□□□ -1.02
NEDD9-203ENST00000397378 DRICH1Q6PGQ1 229 aaPredicted RBP8.68□□□□□ -1.02
NEDD9-203ENST00000397378 FAM47EQ6ZV65 393 aa8.68□□□□□ -1.02
NEDD9-203ENST00000397378 SEM1Q6ZVN7 128 aa8.68□□□□□ -1.02
NEDD9-203ENST00000397378 MAATS1Q7Z4T9 603 aa8.68□□□□□ -1.02
NEDD9-203ENST00000397378 DENND6AQ8IWF6 608 aa8.68□□□□□ -1.02
NEDD9-203ENST00000397378 PALM2Q8IXS6 379 aa8.68□□□□□ -1.02
NEDD9-203ENST00000397378 TMEM132CQ8N3T6 1108 aa8.68□□□□□ -1.02
NEDD9-203ENST00000397378 FBXW8Q8N3Y1 598 aa8.68□□□□□ -1.02
NEDD9-203ENST00000397378 GPATCH11Q8N954 259 aa8.68□□□□□ -1.02
NEDD9-203ENST00000397378 ANKRD53Q8N9V6 530 aa8.68□□□□□ -1.02
NEDD9-203ENST00000397378 TNIP2Q8NFZ5 429 aa8.68□□□□□ -1.02
NEDD9-203ENST00000397378 PPP1R14CQ8TAE6 165 aa8.68□□□□□ -1.02
NEDD9-203ENST00000397378 ALKBH8Q96BT7 664 aaKnown RBP8.68□□□□□ -1.02
NEDD9-203ENST00000397378 SCYL1Q96KG9 808 aa8.68□□□□□ -1.02
NEDD9-203ENST00000397378 CAPZA3Q96KX2 299 aa8.68□□□□□ -1.02
NEDD9-203ENST00000397378 DACH2Q96NX9 599 aa8.68□□□□□ -1.02
NEDD9-203ENST00000397378 OR4K3Q96R72 315 aa8.68□□□□□ -1.02
NEDD9-203ENST00000397378 NPLQ9BXD5 320 aaPredicted RBP8.68□□□□□ -1.02
NEDD9-203ENST00000397378 SPNS1Q9H2V7 528 aa8.68□□□□□ -1.02
NEDD9-203ENST00000397378 RHBGQ9H310 441 aa8.68□□□□□ -1.02
NEDD9-203ENST00000397378 LIN28AQ9H9Z2 209 aaKnown RBP8.68□□□□□ -1.02
NEDD9-203ENST00000397378 FBXO6Q9NRD1 293 aaPredicted RBP8.68□□□□□ -1.02
NEDD9-203ENST00000397378 SACM1LQ9NTJ5 587 aa8.68□□□□□ -1.02
NEDD9-203ENST00000397378 TUBA8Q9NY65 449 aaPredicted RBP8.68□□□□□ -1.02
NEDD9-203ENST00000397378 SPRR3Q9UBC9 169 aa8.68□□□□□ -1.02
NEDD9-203ENST00000397378 ZNF629Q9UEG4 869 aaPredicted RBP8.68□□□□□ -1.02
NEDD9-203ENST00000397378 ATG4BQ9Y4P1 393 aa8.68□□□□□ -1.02
NEDD9-203ENST00000397378 NPFFR2Q9Y5X5 522 aa8.68□□□□□ -1.02
NEDD9-203ENST00000397378 ATP6AP2A0A1C7CYW4 349 aa8.67□□□□□ -1.02
NEDD9-203ENST00000397378 MAGEB16A2A368 324 aa8.67□□□□□ -1.02
NEDD9-203ENST00000397378 TGFBR3LH3BV60 316 aa8.67□□□□□ -1.02
NEDD9-203ENST00000397378 WWP2O00308 870 aa8.67□□□□□ -1.02
NEDD9-203ENST00000397378 CD5LO43866 347 aa8.67□□□□□ -1.02
NEDD9-203ENST00000397378 ATP6AP2O75787 350 aa8.67□□□□□ -1.02
NEDD9-203ENST00000397378 EPPINO95925 133 aa8.67□□□□□ -1.02
NEDD9-203ENST00000397378 P04436 131 aa8.67□□□□□ -1.02
NEDD9-203ENST00000397378 SERPINA6P08185 405 aa8.67□□□□□ -1.02
NEDD9-203ENST00000397378 F7P08709 466 aaPredicted RBP8.67□□□□□ -1.02
NEDD9-203ENST00000397378 HIST1H2AGP0C0S8 130 aaPredicted RBP8.67□□□□□ -1.02
NEDD9-203ENST00000397378 HIST1H2ADP20671 130 aa8.67□□□□□ -1.02
NEDD9-203ENST00000397378 PPP2R1BP30154 601 aa8.67□□□□□ -1.02
NEDD9-203ENST00000397378 TIMP3P35625 211 aa8.67□□□□□ -1.02
NEDD9-203ENST00000397378 HNF4AP41235 474 aa8.67□□□□□ -1.02
NEDD9-203ENST00000397378 DNASE1L1P49184 302 aa8.67□□□□□ -1.02
NEDD9-203ENST00000397378 AP1S2P56377 157 aa8.67□□□□□ -1.02
NEDD9-203ENST00000397378 WNT3P56703 355 aa8.67□□□□□ -1.02
NEDD9-203ENST00000397378 REEP5Q00765 189 aa8.67□□□□□ -1.02
NEDD9-203ENST00000397378 THOC5Q13769 683 aaKnown RBP8.67□□□□□ -1.02
NEDD9-203ENST00000397378 DHX34Q14147 1143 aaKnown RBP8.67□□□□□ -1.02
NEDD9-203ENST00000397378 CSHL1Q14406 222 aa8.67□□□□□ -1.02
NEDD9-203ENST00000397378 CCNG2Q16589 344 aa8.67□□□□□ -1.02
NEDD9-203ENST00000397378 PHKG1Q16816 387 aa8.67□□□□□ -1.02
NEDD9-203ENST00000397378 POMZP3Q6PJE2 187 aa8.67□□□□□ -1.02
NEDD9-203ENST00000397378 OPN5Q6U736 354 aa8.67□□□□□ -1.02
NEDD9-203ENST00000397378 HSDL2Q6YN16 418 aa8.67□□□□□ -1.02
NEDD9-203ENST00000397378 LMNTD2Q8IXW0 634 aa8.67□□□□□ -1.02
NEDD9-203ENST00000397378 OR8K3Q8NH51 312 aa8.67□□□□□ -1.02
NEDD9-203ENST00000397378 CALML6Q8TD86 181 aa8.67□□□□□ -1.02
NEDD9-203ENST00000397378 EEF1AKMT1Q8WVE0 214 aa8.67□□□□□ -1.02
NEDD9-203ENST00000397378 DAZLQ92904 295 aaKnown RBP8.67□□□□□ -1.02
NEDD9-203ENST00000397378 NEIL2Q969S2 332 aa8.67□□□□□ -1.02
NEDD9-203ENST00000397378 PYCR2Q96C36 320 aa8.67□□□□□ -1.02
NEDD9-203ENST00000397378 HIST1H2AHQ96KK5 128 aa8.67□□□□□ -1.02
NEDD9-203ENST00000397378 HIST1H2AJQ99878 128 aa8.67□□□□□ -1.02
NEDD9-203ENST00000397378 H2AFJQ9BTM1 129 aa8.67□□□□□ -1.02
NEDD9-203ENST00000397378 KLHL31Q9H511 634 aa8.67□□□□□ -1.02
NEDD9-203ENST00000397378 PRTFDC1Q9NRG1 225 aa8.67□□□□□ -1.02
NEDD9-203ENST00000397378 TRMT1Q9NXH9 659 aaKnown RBP8.67□□□□□ -1.02
NEDD9-203ENST00000397378 QPCTLQ9NXS2 382 aa8.67□□□□□ -1.02
NEDD9-203ENST00000397378 C6orf203Q9P0P8 240 aaPredicted RBP8.67□□□□□ -1.02
NEDD9-203ENST00000397378 TRMT6Q9UJA5 497 aaKnown RBP8.67□□□□□ -1.02
NEDD9-203ENST00000397378 CDC42EP3Q9UKI2 254 aa8.67□□□□□ -1.02
NEDD9-203ENST00000397378 MED12Q93074 2177 aa8.66□□□□□ -1.02
NEDD9-203ENST00000397378 ZCWPW2A0A1B0GU75 182 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms